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GWAS Report for Flower color 4
Experimental Details
Number of germplasm analyzed | 553 |
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Number of loci tested | 35,270 |
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Platform name | SoySNP50K |
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Platform details | SoySNP50K iSelect BeadChip |
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Publication for This Experiment
Genetic architecture of cyst nematode resistance revealed by genome-wide association study in soybean
(Vuong et al. 2015a)
BMC Genomics 2015, 16:593
10.1186/s12864-015-1811-y
Controlled vocabulary terms associated with the QTL Family
Other traits reported in this paper
GWAS QTL
The GWAS QTL can be shown in either the SoyBase CMap Genetic Map Viewer (where it can be compared to the other GWAS and biparental QTL) or in the SoyBase GBrowse Genome Viewer (where it can be compared to the genes in that chromosomal region). When a candidate gene has been identified clicking on the gene name ('Glyma') opens the SoyBase Gene Report page for that gene.
GWAS QTL name | Associated locus | R2 | Chromosome | Linkage Group |
Flower color 4-g1 | ss715616657 | 0.63 | Gm13 | F |
Click Here to View Full List of GWAS QTL