Genes Covered By A Chromosome Alteration FN350297.01.01.M4.3

Gene Name

Gene Annotation

Glyma10g24391

ATP binding PFAM PF00004
PFAM PF05496
CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 Panther PTHR23389
DNA replication checkpoint protein CHL12/CTF18 KOG KOG1969
chromosome transmission fidelity protein 18 KO K11269
P-loop containing nucleoside triphosphate hydrolases superfamily protein AT AT1G04730

Glyma10g24430

Synaptobrevin PFAM PF00957
SNARE PROTEINS Panther PTHR21136
Synaptobrevin/VAMP-like protein KOG KOG0859
vesicle-associated membrane protein 72 KO K08511
plasma membrane GO GO:0005886
endosome GO GO:0005768
chloroplast GO GO:0009507
membrane GO GO:0016020
vesicle-mediated transport GO GO:0016192
transport GO GO:0006810
molecular_function GO GO:0003674
vesicle-mediated transport PFAM PF00957
SNARE PROTEINS Panther PTHR21136
Synaptobrevin/VAMP-like protein KOG KOG0859
vesicle-associated membrane protein 72 KO K08511
vesicle-associated membrane protein 726 AT AT1G04760

Glyma10g24445

Spc97 / Spc98 family of spindle pole body (SBP) component AT AT1G80260

Glyma10g24461

PIF1 helicase PFAM PF05970
HELICASE-RELATED Panther PTHR10492
PIF1 helicase AT AT3G51690

Glyma10g24476

prenyltransferase activity PFAM PF01040
1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE Panther PTHR13929
UbiA prenyltransferase family protein AT AT1G60600

Glyma10g24492

ubiquitin thiolesterase activity PFAM PF00443
ubiquitin-specific protease 12 AT AT5G06600

Glyma10g24508

ubiquitin thiolesterase activity PFAM PF00443
UBIQUITIN SPECIFIC PROTEASE FAMILY C19-RELATED Panther PTHR10420
ubiquitin-specific protease 13 AT AT3G11910

Glyma10g24524

POLY [ADP-RIBOSE] POLYMERASE Panther PTHR15447
poly(ADP-ribose) polymerase 2 AT AT2G31320

Glyma10g24540

ABC1 family PFAM PF03109
CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED Panther PTHR10566
Predicted unusual protein kinase KOG KOG1235
ABC1 family PFAM PF03109
Phosphotransferase enzyme family PFAM PF01636
CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED Panther PTHR10566
Predicted unusual protein kinase KOG KOG1235
aarF domain-containing kinase KO K08869
Protein kinase superfamily protein AT AT3G24190

Glyma10g24550

Ankyrin repeat PFAM PF00023
UNCHARACTERIZED WITH ANKYRIN REPEAT DOMAIN Panther PTHR12447
Protein of unknown function (DUF3424) PFAM PF11904
UNCHARACTERIZED WITH ANKYRIN REPEAT DOMAIN Panther PTHR12447
Ankyrin repeat family protein AT AT1G04780

Glyma10g24561

Glyma10g24570

Ankyrin repeat PFAM PF00023
UNCHARACTERIZED WITH ANKYRIN REPEAT DOMAIN Panther PTHR12447
Ankyrin repeat protein KOG KOG0522
protein binding PFAM PF00023
Protein of unknown function (DUF3424) PFAM PF11904
UNCHARACTERIZED WITH ANKYRIN REPEAT DOMAIN Panther PTHR12447
Ankyrin repeat protein KOG KOG0522
Ankyrin repeat family protein AT AT3G24210

Glyma10g24581

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING Panther PTHR22765
RING/U-box superfamily protein AT AT1G04790

Glyma10g24590

Thiolase, C-terminal domain PFAM PF02803
ACETYL-COA C-ACYLTRANSFERASE Panther PTHR18919
3-oxoacyl CoA thiolase KOG KOG1389
Acetyl-CoA C-acyltransferase. EC 2.3.1.16
E2.3.1.16, fadA; acetyl-CoA acyltransferase [EC:2.3.1.16 ] [COG:COG0183 ] [GO:0003988 ] KO K00632
vacuole GO GO:0005773
metabolic process GO GO:0008152
transferase activity, transferring acyl groups other than amino-acyl groups GO GO:0016747
catalytic activity GO GO:0003824
glyoxysome organization GO GO:0010111
fatty acid beta-oxidation GO GO:0006635
peroxisome GO GO:0005777
positive regulation of abscisic acid mediated signaling pathway GO GO:0009789
chloroplast GO GO:0009507
nucleolus GO GO:0005730
vacuolar membrane GO GO:0005774
membrane GO GO:0016020
mitochondrion GO GO:0005739
jasmonic acid biosynthetic process GO GO:0009695
response to wounding GO GO:0009611
acetyl-CoA C-acyltransferase activity GO GO:0003988
fatty acid oxidation GO GO:0019395
Activity=acetyl-CoA C-acyltransferase; Pathway=4-hydroxybenzoate biosynthesis V SoyCyc PWY-6435
Activity=acetyl-CoA C-acyltransferase; Pathway=jasmonic acid biosynthesis SoyCyc PWY-735
Activity=acetyl-CoA C-acyltransferase; Pathway=fatty acid β-oxidation II (core pathway) SoyCyc PWY-5136
Activity=acetyl-CoA C-acyltransferase; Pathway=superpathway of glyoxylate cycle and fatty acid degradation SoyCyc PWY-561
Activity=acetyl-CoA C-acyltransferase; Pathway=fatty acid beta-oxidation II core pathway SoyCyc PWY-5136
Activity=acetyl-CoA C-acyltransferase; Pathway=fatty acid beta-oxidation I SoyCyc FAO-PWY
transferase activity, transferring acyl groups other than amino-acyl groups PFAM PF00108
transferase activity, transferring acyl groups other than amino-acyl groups PFAM PF02803
transferase activity, transferring acyl groups other than amino-acyl groups Panther PTHR18919
3-oxoacyl CoA thiolase KOG KOG1389
acetyl-CoA C-acyltransferase EC 2.3.1.16
acetyl-CoA acyltransferase 1 [EC:2.3.1.16] KO K07513
peroxisomal 3-ketoacyl-CoA thiolase 3 AT AT2G33150

Glyma10g24620

Aldo/keto reductase family PFAM PF00248
ALDO/KETO REDUCTASE Panther PTHR11732
Voltage-gated shaker-like K+ channel, subunit beta/KCNAB KOG KOG1575
plasma membrane GO GO:0005886
membrane GO GO:0016020
oxidation-reduction process GO GO:0055114
transmembrane transport GO GO:0055085
oxidoreductase activity GO GO:0016491
potassium ion transport GO GO:0006813
potassium channel activity GO GO:0005267
Aldo/keto reductase family PFAM PF00248
oxidoreductase activity Panther PTHR11732
Voltage-gated shaker-like K+ channel, subunit beta/KCNAB KOG KOG1575
potassium channel beta subunit 1 AT AT1G04690

Glyma10g24625

FAR1 DNA-binding domain PFAM PF03101

Glyma10g24630

Pectate lyase PFAM PF00544
Pectate lyase. EC 4.2.2.2
E4.2.2.2, pel; pectate lyase [EC:4.2.2.2 ] [GO:0030570 ] KO K01728
endomembrane system GO GO:0012505
lyase activity GO GO:0016829
pectate lyase activity GO GO:0030570
membrane GO GO:0016020
biological_process GO GO:0008150
Pectate lyase PFAM PF00544
pectate lyase EC 4.2.2.2
pectate lyase [EC:4.2.2.2] KO K01728
Pectin lyase-like superfamily protein AT AT4G13710

Glyma10g24656

hydrolase activity PFAM PF01725
hydrolase activity Panther PTHR11067
Inosine triphosphate pyrophosphatase KOG KOG3222
nucleoside-triphosphate diphosphatase EC 3.6.1.19
nucleoside-triphosphate pyrophosphatase [EC:3.6.1.19] KO K01519
Inosine triphosphate pyrophosphatase family protein AT AT4G13720

Glyma10g24682

cofactor binding PFAM PF02826
2-HYDROXYACID DEHYDROGENASE Panther PTHR10996
hydroxypyruvate reductase AT AT1G68010

Glyma10g24708

low-molecular-weight cysteine-rich 44 AT AT3G06985

Glyma10g24734

UNCHARACTERIZED Panther PTHR21528
Undecaprenyl pyrophosphate synthetase family protein AT AT1G11755

Glyma10g24760

TRNA SYNTHETASE-RELATED Panther PTHR11451
TRNA SYNTHETASE-RELATED Panther PTHR11451
Class II aaRS and biotin synthetases superfamily protein AT AT3G62120

Glyma10g24860

Glyma10g24960

S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) PFAM PF07333

Glyma10g25060

Glyma10g25153

Glyma10g25246

WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES (WIPI)-RELATED Panther PTHR11227
homolog of yeast autophagy 18 (ATG18) B AT AT4G30510

Glyma10g25340

Armadillo/beta-catenin-like repeat PFAM PF00514
BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING Panther PTHR23315
Armadillo/beta-catenin-like repeat PFAM PF00514
Kinesin-associated protein (KAP) PFAM PF05804
BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING Panther PTHR23315
Plant U-Box 15 AT AT5G42340

Glyma10g25350

Glyma10g25370

Glyma10g25381

nucleus PFAM PF01486
MADS BOX PROTEIN Panther PTHR11945
AGAMOUS-like 6 AT AT2G45650

Glyma10g25390

basic helix-loop-helix (bHLH) DNA-binding superfamily protein AT AT3G23690

Glyma10g25406

RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL Panther PTHR13890
magnesium transporter 9 AT AT5G64560

Glyma10g25423

Protein of unknown function (DUF3741) PFAM PF12552
PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYNDROME CRITICAL REGION PROTEIN 5)-RELATED Panther PTHR21726
Protein of unknown function (DUF3741) AT AT5G02390

Glyma10g25440

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Protein kinase domain PFAM PF00069
Leucine-rich repeat protein KOG KOG0472
Leucine rich repeat N-terminal domain PFAM PF08263
protein binding PFAM PF00560
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine-rich repeat receptor-like protein kinase family protein AT AT2G33170

Glyma10g25461

Glyma10g25480

GATA zinc finger PFAM PF00320
SUBFAMILY NOT NAMED Panther PTHR22949:SF3
sequence-specific DNA binding PFAM PF00320
SUBFAMILY NOT NAMED Panther PTHR22949:SF3
GATA transcription factor 1 AT AT3G24050

Glyma10g25490

Uncharacterized protein family UPF0016 PFAM PF01169
TRANSMEMBRANE PROTEIN HTP-1 RELATED Panther PTHR12608
Predicted membrane protein KOG KOG2881
membrane PFAM PF01169
membrane Panther PTHR12608
Predicted membrane protein KOG KOG2881
Uncharacterized protein family (UPF0016) AT AT4G13590

Glyma10g25500

Core-2/I-Branching enzyme PFAM PF02485
GLYCOSYLTRANSFERASE 14 FAMILY MEMBER Panther PTHR19297
Branching enzyme KOG KOG0799
membrane PFAM PF02485
GLYCOSYLTRANSFERASE 14 FAMILY MEMBER Panther PTHR19297
Branching enzyme KOG KOG0799
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein AT AT3G24040

Glyma10g25510

AT AT3G22520

Glyma10g25531

STARCH SYNTHASE Panther PTHR12526:SF17
starch synthase 3 AT AT1G11720

Glyma10g25550

Hydroxyethylthiazole kinase family PFAM PF02110
FAMILY NOT NAMED Panther PTHR20857
Hydroxyethylthiazole kinase. EC 2.7.1.50
E2.7.1.50, thiM; hydroxyethylthiazole kinase [EC:2.7.1.50 ] [COG:COG2145 ] [GO:0004417 ] KO K00878
hydroxyethylthiazole kinase activity PFAM PF02110
Phosphomethylpyrimidine kinase PFAM PF08543
THIAMINE-PHOSPHATE PYROPHOSPHORYLASE Panther PTHR20857
hydroxyethylthiazole kinase EC 2.7.1.50
hydroxyethylthiazole kinase [EC:2.7.1.50] KO K00878
hydroxyethylthiazole kinase family protein AT AT3G24030

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain