Genes Covered By A Chromosome Alteration FN303710.01.01.M4.5

Gene Name

Gene Annotation

Glyma12g23890

IQ calmodulin-binding motif PFAM PF00612
VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL Panther PTHR10217
K+-channel ERG and related proteins, contain PAS/PAC sensor domain KOG KOG0498
CNGF; cyclic nucleotide gated channel, other eukaryote KO K05391
membrane GO GO:0016020
calmodulin binding GO GO:0005516
transmembrane transport GO GO:0055085
cyclic nucleotide binding GO GO:0030551
ion transport GO GO:0006811
potassium channel activity GO GO:0005267
ion transport PFAM PF00520
Cyclic nucleotide-binding domain PFAM PF00027
VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL Panther PTHR10217
K+-channel ERG and related proteins, contain PAS/PAC sensor domain KOG KOG0498
cyclic nucleotide gated channel, other eukaryote KO K05391
cyclic nucleotide gated channel 5 AT AT5G57940

Glyma12g23910

Leucine Rich Repeat PFAM PF00560
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
protein binding PFAM PF00560
protein phosphorylation PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine-rich repeat protein kinase family protein AT AT2G24230

Glyma12g23920

Triose-phosphate Transporter family PFAM PF03151
Predicted UDP-galactose transporter KOG KOG2234
membrane PFAM PF00892
transmembrane transport PFAM PF08449
Triose-phosphate Transporter family PFAM PF03151
Predicted integral membrane protein KOG KOG1443
purine permease 5 AT AT2G24220

Glyma12g23950

WRKY DNA -binding domain PFAM PF03106
sequence-specific DNA binding PFAM PF03106
WRKY DNA-binding protein 32 AT AT4G30935

Glyma12g24150

Domain of unknown function (DUF3598) PFAM PF12204
Domain of unknown function (DUF3598) AT AT2G44760

Glyma12g24163

dicer-like 4 AT AT5G20320

Glyma12g24176

DNA binding PFAM PF02892
Protein of unknown function (DUF 659) PFAM PF04937
protein dimerization activity PFAM PF05699
hAT transposon superfamily AT AT4G15020

Glyma12g24190

Fructose-bisphosphate aldolase class-I PFAM PF00274
FRUCTOSE-BISPHOSPHATE ALDOLASE Panther PTHR11627
Fructose-biphosphate aldolase KOG KOG1557
response to cadmium ion GO GO:0046686
plastoglobule GO GO:0010287
response to oxidative stress GO GO:0006979
mitochondrion GO GO:0005739
fructose-bisphosphate aldolase activity GO GO:0004332
chloroplast GO GO:0009507
pentose-phosphate shunt GO GO:0006098
Activity=fructose-bisphosphate aldolase; Pathway=Calvin-Benson-Bassham cycle SoyCyc CALVIN-PWY
Activity=fructose-bisphosphate aldolase; Pathway=sucrose biosynthesis SoyCyc SUCSYN-PWY
Activity=fructose-bisphosphate aldolase; Pathway=gluconeogenesis I SoyCyc GLUCONEO-PWY
Activity=fructose-bisphosphate aldolase; Pathway=sucrose degradation VI (anaerobic) SoyCyc PWY-3801
Activity=fructose-bisphosphate aldolase; Pathway=superpathway of glycolysis and Entner-Doudoroff SoyCyc GLYCOLYSIS-E-D
Activity=fructose-bisphosphate aldolase; Pathway=superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle SoyCyc PWY-5464
Activity=fructose-bisphosphate aldolase; Pathway=glycolysis I SoyCyc GLYCOLYSIS
Activity=fructose-bisphosphate aldolase; Pathway=glycolysis IV (plant cytosol) SoyCyc PWY-1042
Activity=fructose-bisphosphate aldolase; Pathway=glycolysis II (from fructose-6P) SoyCyc PWY-5484
Activity=fructose-bisphosphate aldolase; Pathway=oxygenic photosynthesis SoyCyc PHOTOALL-PWY
Activity=fructose-bisphosphate aldolase; Pathway=superpathway of cytosolic glycolysis plants, pyruvate dehydrogenase and TCA cycle SoyCyc PWY-5464
Activity=fructose-bisphosphate aldolase; Pathway=sucrose degradation to ethanol and lactate anaerobic SoyCyc PWY-3801
Activity=fructose-bisphosphate aldolase; Pathway=Glycolysis I SoyCyc GLYCOLYSIS
Activity=fructose-bisphosphate aldolase; Pathway=superpathway of glycolysis and Entner-Doudoroff SoyCyc GLYCOLYSIS-E-D
Activity=fructose-bisphosphate aldolase; Pathway=Gluconeogenesis SoyCyc GLUCONEO-PWY
Activity=fructose-bisphosphate aldolase; Pathway=Glycolysis III SoyCyc ANAGLYCOLYSIS-PWY
Activity=fructose-bisphosphate aldolase; Pathway=Glycolysis IV plant cytosol SoyCyc PWY-1042
Activity=fructose-bisphosphate aldolase; Pathway=Calvin-Benson-Bassham cycle SoyCyc CALVIN-PWY
glycolysis PFAM PF00274
glycolysis Panther PTHR11627
Fructose-biphosphate aldolase KOG KOG1557
Aldolase superfamily protein AT AT2G01140

Glyma12g24205

Domain of unknown function (DUF3594) PFAM PF12165
alfin-like 5 AT AT5G20510

Glyma12g24221

metal ion binding PFAM PF00596
PENTULOSE-5-PHOSPHATE-4-EPIMERASE-RELATED Panther PTHR10640
haloacid dehalogenase-like hydrolase family protein AT AT5G53850

Glyma12g24235

nucleic acid binding PFAM PF01107

Glyma12g24250

VQ motif PFAM PF05678
VQ motif PFAM PF05678
VQ motif-containing protein AT AT1G28280

Glyma12g24368

auxin response factor 6 AT AT1G30330

Glyma12g24486

acid-amino acid ligase activity PFAM PF00179
UBIQUITIN-CONJUGATING ENZYME E2 Panther PTHR11621
Ubiquitin-protein ligase KOG KOG0417
ubiquitin-conjugating enzyme 25 AT AT3G15355

Glyma12g24604

acid-amino acid ligase activity PFAM PF00179
UBIQUITIN-CONJUGATING ENZYME E2 Panther PTHR11621
Ubiquitin-protein ligase KOG KOG0417
ubiquitin-conjugating enzyme 25 AT AT3G15355

Glyma12g24722

CYTOCHROME P450 Panther PTHR19383:SF106
cytochrome P450, family 704, subfamily A, polypeptide 2 AT AT2G45510

Glyma12g24840

Metallothionein PFAM PF01439
metallothionein 3 AT AT3G15353

Glyma12g24860

Cytochrome C oxidase copper chaperone (COX17) PFAM PF05051
FAMILY NOT NAMED Panther PTHR16719
Cytochrome c oxidase assembly protein/Cu2+ chaperone COX17 KOG KOG3496
COX17; cytochrome c oxidase subunit XVII assembly protein KO K02260
mitochondrial intermembrane space PFAM PF05051
mitochondrial intermembrane space Panther PTHR16719
Cytochrome c oxidase assembly protein/Cu2+ chaperone COX17 KOG KOG3496
cytochrome c oxidase subunit XVII assembly protein KO K02260
cytochrome c oxidase 17 AT AT3G15352

Glyma12g24910

AT AT1G53035

Glyma12g24920

Glyma12g24931

DRUG-EFFLUX TRANSPORTER Panther PTHR10074:SF14
zinc induced facilitator-like 1 AT AT5G13750

Glyma12g24941

gb def: Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K1G2 Panther PTHR23328:SF3
SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related AT AT2G38920

AT ATMG00660

Glyma12g24991

mitochondrial electron transport, cytochrome c to oxygen PFAM PF00510
mitochondrial electron transport, cytochrome c to oxygen Panther PTHR11403
Cytochrome oxidase subunit III and related proteins KOG KOG4664
cytochrome-c oxidase EC 1.9.3.1
cytochrome c oxidase subunit III [EC:1.9.3.1] KO K02262
Cytochrome c oxidase, subunit III AT AT2G07687

Glyma12g25000

Protein tyrosine kinase PFAM PF07714
CDC2-RELATED KINASE Panther PTHR11295
Cdc2-related protein kinase KOG KOG0600
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
CDC2-RELATED KINASE Panther PTHR11295
Cdc2-related protein kinase KOG KOG0600
Protein kinase superfamily protein AT AT1G53050

Glyma12g25080

Glyma12g25160

protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED Panther PTHR22982
CDPK-related kinase AT AT3G50530

Glyma12g25240

WD domain, G-beta repeat PFAM PF00400
WD40 REPEAT FAMILY Panther PTHR22850
Conserved WD40 repeat-containing protein KOG KOG0316
protein phosphorylation PFAM PF00069
WD domain, G-beta repeat PFAM PF00400
WD40 REPEAT PROTEIN Panther PTHR22847
U5 snRNP-specific protein-like factor and related proteins KOG KOG0265
SPA1-related 3 AT AT3G15354
EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE (EIF2-ALPHA KINASE)-RELATED Panther PTHR11042

Glyma12g25250

Core-2/I-Branching enzyme PFAM PF02485
GLYCOSYLTRANSFERASE 14 FAMILY MEMBER Panther PTHR19297
Branching enzyme KOG KOG0799
membrane PFAM PF02485
GLYCOSYLTRANSFERASE 14 FAMILY MEMBER Panther PTHR19297
Branching enzyme KOG KOG0799
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein AT AT4G27480

Glyma12g25460

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
protein binding PFAM PF00560
Di-glucose binding within endoplasmic reticulum PFAM PF11721
protein phosphorylation PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine-rich repeat transmembrane protein kinase AT AT1G53430

Glyma12g25470

gb def: Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNA5 Panther PTHR21355:SF3
gb def: Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNA5 Panther PTHR21355:SF3
LMBR1-like membrane protein AT AT5G65290

Glyma12g25485

FTSH protease 10 AT AT1G07510

Glyma12g25500

Uncharacterised BCR, YbaB family COG0718 PFAM PF02575
chloroplast GO GO:0009507
chloroplast thylakoid membrane GO GO:0009535
chloroplast stroma GO GO:0009570
chloroplast envelope GO GO:0009941
biological_process GO GO:0008150
Uncharacterised BCR, YbaB family COG0718 PFAM PF02575
Uncharacterised BCR, YbaB family COG0718 AT AT2G24020

Glyma12g25700

Tetratricopeptide repeat PFAM PF00515
ANAPHASE PROMOTING COMPLEX SUBUNIT Panther PTHR12558
Anaphase-promoting complex (APC), Cdc16 subunit KOG KOG1173
regulation of DNA endoreduplication GO GO:0032875
phloem or xylem histogenesis GO GO:0010087
cell cycle GO GO:0007049
cellular_component GO GO:0005575
binding GO GO:0005488
protein binding PFAM PF00515
ANAPHASE PROMOTING COMPLEX SUBUNIT Panther PTHR12558
Anaphase-promoting complex (APC), Cdc16 subunit KOG KOG1173
anaphase-promoting complex subunit 6 KO K03353
anaphase promoting complex 6 AT AT1G78770

Glyma12g25713

AT AT4G15140

Glyma12g25726

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Pentatricopeptide repeat (PPR) superfamily protein AT AT1G63400

Glyma12g25740

Glycosyl hydrolases family 18 PFAM PF00704
hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF00704
chitinase A AT AT5G24090

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain