Genes Covered By A Chromosome Alteration FN301116.02.01.M4.3

Gene Name

Gene Annotation

Glyma12g15235

Glyma12g15250

Protein of unknown function (DUF640) PFAM PF04852
Protein of unknown function (DUF640) PFAM PF04852
Protein of unknown function (DUF640) AT AT2G42610

Glyma12g15260

Transposase family tnp2 PFAM PF02992
alpha-mannosidase 3 AT AT1G30000

Glyma12g15285

Myb-like DNA-binding domain PFAM PF00249
HSP40 Panther PTHR11821:SF29
Duplicated homeodomain-like superfamily protein AT AT5G08520

Glyma12g15311

Uncharacterized conserved protein (DUF2358) PFAM PF10184
Panther PTHR19317:SF1
Uncharacterized conserved protein (DUF2358) AT AT1G79510

Glyma12g15335

Protein of unknown function (DUF1218) PFAM PF06749
Protein of unknown function (DUF1218) AT AT1G61065

Glyma12g15360

F-BOX/LEUCINE RICH REPEAT PROTEIN Panther PTHR23125
F-BOX/LEUCINE RICH REPEAT PROTEIN Panther PTHR23125
RNI-like superfamily protein AT AT2G42620

Glyma12g15370

Protein kinase domain PFAM PF00069
SERINE-THREONINE PROTEIN KINASE Panther PTHR23257
Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs KOG KOG0192
protein phosphorylation PFAM PF07714
Protein kinase domain PFAM PF00069
SERINE-THREONINE PROTEIN KINASE Panther PTHR23257
Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs KOG KOG0192
Mitogen activated protein kinase kinase kinase-related AT AT3G58640

Glyma12g15380

AMIDASE Panther PTHR11895
carbon-nitrogen ligase activity, with glutamine as amido-N-donor PFAM PF01425
carbon-nitrogen ligase activity, with glutamine as amido-N-donor Panther PTHR11895
fatty acid amide hydrolase AT AT5G64440

Glyma12g15390

Protein of unknown function (DUF688) PFAM PF05097
Protein of unknown function (DUF688) PFAM PF05097
Protein of unknown function (DUF688) AT AT2G30990

Glyma12g15400

Protein of unknown function (DUF1637) PFAM PF07847
FAMILY NOT NAMED Panther PTHR22966
Uncharacterized conserved protein KOG KOG4281
cysteamine dioxygenase activity PFAM PF07847
UNCHARACTERIZED Panther PTHR22966
Uncharacterized conserved protein KOG KOG4281
cysteamine dioxygenase EC 1.13.11.19
cysteamine dioxygenase [EC:1.13.11.19] KO K10712
Protein of unknown function (DUF1637) AT AT2G42670

Glyma12g15410

Helix-turn-helix PFAM PF01381
ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 (MULTIPROTEIN BRIDGING FACTOR 1) Panther PTHR10245
Transcription factor MBF1 KOG KOG3398
sequence-specific DNA binding PFAM PF01381
ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 (MULTIPROTEIN BRIDGING FACTOR 1) Panther PTHR10245
Transcription factor MBF1 KOG KOG3398
multiprotein bridging factor 1A AT AT2G42680

Glyma12g15421

Multiprotein bridging factor 1 PFAM PF08523
sequence-specific DNA binding PFAM PF01381
ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 (MULTIPROTEIN BRIDGING FACTOR 1) Panther PTHR10245
Transcription factor MBF1 KOG KOG3398
putative transcription factor KO K03627
multiprotein bridging factor 1A AT AT2G42680

Glyma12g15430

Lipase (class 3) PFAM PF01764
triglyceride lipase activity PFAM PF01764
alpha/beta-Hydrolases superfamily protein AT AT2G42690

Glyma12g15440

vesicle docking involved in exocytosis PFAM PF00995
AT AT2G42700

Glyma12g15450

Ribosomal protein L1p/L10e family PFAM PF00687
60S RIBOSOMAL PROTEIN L10A - RELATED Panther PTHR23105
50S ribosomal protein L1 KOG KOG1569
RNA binding PFAM PF00687
60S RIBOSOMAL PROTEIN L10A - RELATED Panther PTHR23105
50S ribosomal protein L1 KOG KOG1569
Ribosomal protein L1p/L10e family AT AT2G42710

Glyma12g15460

Peroxidase PFAM PF00141
peroxidase activity PFAM PF00141
Peroxidase superfamily protein AT AT5G05340

Glyma12g15470

Protein kinase domain PFAM PF00069
CDC2-RELATED KINASE Panther PTHR11295
Glycogen synthase kinase-3 KOG KOG0658
E2.7.1.-; [EC:2.7.1.- ] [COG:COG0515 COG1493 ] KO K00924
response to salt stress GO GO:0009651
hyperosmotic response GO GO:0006972
positive regulation of protein export from nucleus GO GO:0046827
leaf morphogenesis GO GO:0009965
multidimensional cell growth GO GO:0009825
response to auxin stimulus GO GO:0009733
detection of brassinosteroid stimulus GO GO:0009729
protein autophosphorylation GO GO:0046777
identical protein binding GO GO:0042802
cytosol GO GO:0005829
plasma membrane GO GO:0005886
hyperosmotic salinity response GO GO:0042538
regulation of protein localization GO GO:0032880
brassinosteroid mediated signaling pathway GO GO:0009742
protein phosphorylation GO GO:0006468
kinase activity GO GO:0016301
cellular_component GO GO:0005575
ATP binding GO GO:0005524
protein serine/threonine kinase activity GO GO:0004674
protein kinase activity GO GO:0004672
protein binding GO GO:0005515
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
CDC2-RELATED KINASE Panther PTHR11295
Glycogen synthase kinase-3 KOG KOG0658
Phosphotransferases with an alcohol group as acceptor. EC 2.7.1.-
phosphatidylinositol-4-phosphate 3-kinase [EC:2.7.1.154] KO K00924
SHAGGY-related protein kinase dZeta AT AT2G30980

Glyma12g15480

ASPARTATE AMINOTRANSFERASE Panther PTHR11879
ASPARTATE AMINOTRANSFERASE Panther PTHR11879
aspartate aminotransferase 1 AT AT2G30970

Glyma12g15500

Trehalose-phosphatase PFAM PF02358
TREHALOSE-6-PHOSPHATE SYNTHASE Panther PTHR10788
Trehalose-6-phosphate synthase component TPS1 and related subunits KOG KOG1050
Alpha,alpha-trehalose-phosphate synthase (UDP-forming). EC 2.4.1.15
E2.4.1.15, otsA; alpha,alpha-trehalose-phosphate synthase (UDP-forming) [EC:2.4.1.15 ] [COG:COG0380 ] [GO:0003825 ] [CAZy:GT20 ] KO K00697
Trehalose-phosphatase. EC 3.1.3.12
E3.1.3.12, otsB; trehalose-phosphatase [EC:3.1.3.12 ] [COG:COG1877 ] [GO:0004805 ] KO K01087
Activity=trehalose-phosphatase, alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity; Pathway=trehalose biosynthesis I SoyCyc TRESYN-PWY
Activity=trehalose-phosphatase; Pathway=trehalose biosynthesis I SoyCyc TRESYN-PWY
trehalose biosynthetic process PFAM PF00982
trehalose biosynthetic process PFAM PF02358
TREHALOSE-6-PHOSPHATE SYNTHASE Panther PTHR10788
Trehalose-6-phosphate synthase component TPS1 and related subunits KOG KOG1050
α,α-trehalose-phosphate synthase (UDP-forming) EC 2.4.1.15
trehalose-phosphatase EC 3.1.3.12
KO K00697,K01087
trehalose-phosphatase/synthase 7 AT AT1G06410

Glyma12g15530

Protein of unknown function (DUF1685) PFAM PF07939
AT AT2G42760

Glyma12g15560

DnaJ domain PFAM PF00226
DNAJ/HSP40 Panther PTHR11821
Molecular chaperone (DnaJ superfamily) KOG KOG0716
heat shock protein binding PFAM PF00226
DNAJ/HSP40 Panther PTHR11821
Molecular chaperone (DnaJ superfamily) KOG KOG0716
DNAJ heat shock N-terminal domain-containing protein AT AT2G42750

Glyma12g15620

Glycosyl hydrolase family 1 PFAM PF00232
GLYCOSIDE HYDROLASES Panther PTHR10353
Beta-glucosidase, lactase phlorizinhydrolase, and related proteins KOG KOG0626
Beta-glucosidase. EC 3.2.1.21
E3.2.1.21; beta-glucosidase [EC:3.2.1.21 ] [GO:0008422 ] KO K01188
Activity=beta-primeverosidase; Pathway=linamarin degradation SoyCyc PWY-3121
Activity=beta-primeverosidase; Pathway=lotaustralin degradation SoyCyc PWY-6002
hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF00232
hydrolase activity, hydrolyzing O-glycosyl compounds Panther PTHR10353
Beta-glucosidase, lactase phlorizinhydrolase, and related proteins KOG KOG0626
beta glucosidase 17 AT AT2G44480

Glyma12g15660

Papain family cysteine protease PFAM PF00112
CYSTEINE PROTEASE FAMILY C1-RELATED Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
Cathepsin propeptide inhibitor domain (I29) PFAM PF08246
cysteine-type peptidase activity PFAM PF00112
cysteine-type peptidase activity Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
senescence-associated gene 12 AT AT5G45890

Glyma12g15680

Papain family cysteine protease PFAM PF00112
CYSTEINE PROTEASE FAMILY C1-RELATED Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
Cathepsin propeptide inhibitor domain (I29) PFAM PF08246
cysteine-type peptidase activity PFAM PF00112
cysteine-type peptidase activity Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
senescence-associated gene 12 AT AT5G45890

Glyma12g15690

Papain family cysteine protease PFAM PF00112
CYSTEINE PROTEASE FAMILY C1-RELATED Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
Cathepsin propeptide inhibitor domain (I29) PFAM PF08246
cysteine-type peptidase activity PFAM PF00112
cysteine-type peptidase activity Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
Cysteine proteinases superfamily protein AT AT5G50260

Glyma12g15710

MEMBRANE ASSOCIATED PROGESTERONE RECEPTOR-RELATED Panther PTHR10281
heme binding PFAM PF00173
MEMBRANE ASSOCIATED PROGESTERONE RECEPTOR-RELATED Panther PTHR10281
membrane-associated progesterone binding protein 2 AT AT2G24940

Glyma12g15725

Cathepsin propeptide inhibitor domain (I29) PFAM PF08246
cysteine-type peptidase activity PFAM PF00112
cysteine-type peptidase activity Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
Cysteine proteinases superfamily protein AT AT5G50260

Glyma12g15740

Papain family cysteine protease PFAM PF00112
CYSTEINE PROTEASE FAMILY C1-RELATED Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
Cathepsin propeptide inhibitor domain (I29) PFAM PF08246
cysteine-type peptidase activity PFAM PF00112
cysteine-type peptidase activity Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
Cysteine proteinases superfamily protein AT AT5G50260

Glyma12g15750

Papain family cysteine protease PFAM PF00112
CYSTEINE PROTEASE FAMILY C1-RELATED Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
Cathepsin propeptide inhibitor domain (I29) PFAM PF08246
cysteine-type peptidase activity PFAM PF00112
cysteine-type peptidase activity Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
senescence-associated gene 12 AT AT5G45890

Glyma12g15760

Papain family cysteine protease PFAM PF00112
CYSTEINE PROTEASE FAMILY C1-RELATED Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
Cathepsin propeptide inhibitor domain (I29) PFAM PF08246
cysteine-type peptidase activity PFAM PF00112
cysteine-type peptidase activity Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
senescence-associated gene 12 AT AT5G45890

Glyma12g15780

Papain family cysteine protease PFAM PF00112
CYSTEINE PROTEASE FAMILY C1-RELATED Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
Cathepsin propeptide inhibitor domain (I29) PFAM PF08246
cysteine-type peptidase activity PFAM PF00112
cysteine-type peptidase activity Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
senescence-associated gene 12 AT AT5G45890

Glyma12g15790

Papain family cysteine protease PFAM PF00112
CYSTEINE PROTEASE FAMILY C1-RELATED Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
Cathepsin propeptide inhibitor domain (I29) PFAM PF08246
cysteine-type peptidase activity PFAM PF00112
cysteine-type peptidase activity Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
senescence-associated gene 12 AT AT5G45890

Glyma12g15800

ribosomal L5P family C-terminus PFAM PF00673
60S RIBOSOMAL PROTEIN L11-RELATED Panther PTHR11994
60S ribosomal protein L11 KOG KOG0397
cytosolic ribosome GO GO:0022626
nucleolus GO GO:0005730
membrane GO GO:0016020
vacuole GO GO:0005773
chloroplast GO GO:0009507
cytosolic large ribosomal subunit GO GO:0022625
translation GO GO:0006412
structural constituent of ribosome GO GO:0003735
intracellular PFAM PF00281
intracellular PFAM PF00673
intracellular Panther PTHR11994
60S ribosomal protein L11 KOG KOG0397
Ribosomal L5P family protein AT AT5G45775

Glyma12g15810

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
RING FINGER PROTEIN 24-RELATED Panther PTHR22766
Anaphase-promoting complex (APC), subunit 11 KOG KOG1493
Zinc finger, C3HC4 type (RING finger) PFAM PF00097
RING FINGER PROTEIN 24-RELATED Panther PTHR22766
Anaphase-promoting complex (APC), subunit 11 KOG KOG1493
RING/U-box superfamily protein AT AT3G58720

Glyma12g15825

innate immune response PFAM PF01582
apoptosis PFAM PF00931
Leucine Rich Repeat PFAM PF07725
protein binding PFAM PF00560
LEUCINE-RICH REPEAT-CONTAINING PROTEIN Panther PTHR23155
Apoptotic ATPase KOG KOG4658
disease resistance protein (TIR-NBS-LRR class), putative AT AT5G17680

Glyma12g15840

syntaxin of plants 61 AT AT1G28490

Glyma12g15850

Leucine Rich Repeat PFAM PF00560
LEUCINE-RICH REPEAT-CONTAINING PROTEIN Panther PTHR23155
innate immune response PFAM PF01582
apoptosis PFAM PF00931
PFAM PF05729
Leucine Rich Repeat PFAM PF07725
protein binding PFAM PF00560
LEUCINE-RICH REPEAT-CONTAINING PROTEIN Panther PTHR23155
Apoptotic ATPase KOG KOG4658
disease resistance protein (TIR-NBS-LRR class), putative AT AT5G17680

Glyma12g15860

Leucine Rich Repeat PFAM PF00560
Apoptotic ATPase KOG KOG4658
TIR domain PFAM PF01582
innate immune response PFAM PF01582
apoptosis PFAM PF00931
Leucine Rich Repeat PFAM PF07725
protein binding PFAM PF00560
LEUCINE-RICH REPEAT-CONTAINING PROTEIN Panther PTHR23155
Apoptotic ATPase KOG KOG4658
disease resistance protein (TIR-NBS-LRR class), putative AT AT5G17680

Glyma12g15870

GLUCOSYL/GLUCURONOSYL TRANSFERASES Panther PTHR11926
UDP-glucuronosyl and UDP-glucosyl transferase KOG KOG1192
transferase activity, transferring hexosyl groups PFAM PF00201
transferase activity, transferring hexosyl groups Panther PTHR11926
UDP-glucuronosyl and UDP-glucosyl transferase KOG KOG1192
UDP-Glycosyltransferase superfamily protein AT AT5G54010

Glyma12g15880

Glyma12g15890

Protein kinase domain PFAM PF00069
MAPKK-RELATED SERINE/THREONINE PROTEIN KINASES Panther PTHR22986
Protein tyrosine kinase PFAM PF07714
protein phosphorylation PFAM PF00069
MAPKK-RELATED SERINE/THREONINE PROTEIN KINASES Panther PTHR22986
Protein kinase superfamily protein AT AT4G14480

Glyma12g15940

GMC oxidoreductase PFAM PF00732
PHYTOENE DEHYDROGENASE Panther PTHR10668
Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) KOG KOG1238
oxidation-reduction process GO GO:0055114
long-chain-alcohol oxidase activity GO GO:0046577
alcohol metabolic process GO GO:0006066
response to cold GO GO:0009409
monooxygenase activity PFAM PF01494
oxidoreductase activity, acting on CH-OH group of donors PFAM PF00732
oxidoreductase activity PFAM PF00890
oxidoreductase activity, acting on CH-OH group of donors PFAM PF05199
PHYTOENE DEHYDROGENASE Panther PTHR10668
Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) KOG KOG1238
fatty alcohol oxidase 3 AT AT3G23410

Glyma12g15951

6-phosphofructokinase activity PFAM PF00365
Phosphofructokinase family protein AT AT4G04040

Glyma12g15961

innate immune response PFAM PF01582
Leucine Rich Repeat PFAM PF07725
disease resistance protein (TIR-NBS-LRR class), putative AT AT5G17680

Glyma12g15971

nucleotidyltransferase activity Panther PTHR11952
N-acetylglucosamine-1-phosphate uridylyltransferase 2 AT AT2G35020

Glyma12g15980

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein AT AT5G66180

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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