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Integrating Genetics and Genomics to Advance Soybean Research

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← Mutant Description Page

Genes Covered By A Chromosome Alteration FN300735.01.01.M4.3

Gene Name

Gene Annotation

Ribosomal L38e protein family PFAM PF01781
60S RIBOSOMAL PROTEIN L38 Panther PTHR10965
60S ribosomal protein L38 KOG KOG3499
RP-L38e, RPL38; large subunit ribosomal protein L38e [GO:0005842 ] KO K02923
cytosolic ribosome GO GO:0022626
ribosome biogenesis GO GO:0042254
cytosolic large ribosomal subunit GO GO:0022625
translation GO GO:0006412
ribosome GO GO:0005840
structural constituent of ribosome GO GO:0003735
intracellular PFAM PF01781
intracellular Panther PTHR10965
60S ribosomal protein L38 KOG KOG3499
large subunit ribosomal protein L38e KO K02923
Ribosomal L38e protein family AT AT3G59540

Auxin response factor PFAM PF06507
regulation of transcription, DNA-dependent PFAM PF02362
response to hormone stimulus PFAM PF06507
nucleus PFAM PF02309
auxin response factor 8 AT AT5G37020

AT AT4G22000

Galactosyltransferase PFAM PF01762
BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE Panther PTHR11214
Galactosyltransferases KOG KOG2287
Galactoside-binding lectin PFAM PF00337
GALECTIN Panther PTHR11346
sugar binding PFAM PF00337
galactosyltransferase activity PFAM PF01762
galactosyltransferase activity Panther PTHR11214
Galactosyltransferases KOG KOG2287
Galactosyltransferase family protein AT AT4G21060

Lipase (class 3) PFAM PF01764
Predicted lipase KOG KOG4569
triglyceride lipase activity PFAM PF01764
Predicted lipase KOG KOG4569
alpha/beta-Hydrolases superfamily protein AT AT1G30370

F-box domain PFAM PF00646
protein binding PFAM PF00646
F-box/RNI-like superfamily protein AT AT1G13570

AT AT5G19480

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
FAMILY NOT NAMED Panther PTHR15315
Predicted E3 ubiquitin ligase KOG KOG4172
FAMILY NOT NAMED Panther PTHR15315
Predicted E3 ubiquitin ligase KOG KOG4172
RING/U-box superfamily protein AT AT1G24440

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
protein phosphorylation PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine-rich repeat protein kinase family protein AT AT1G67720

Myb-like DNA-binding domain PFAM PF00249
SENSOR HISTIDINE KINASE-RELATED Panther PTHR23283
two-component response regulator activity PFAM PF00072
Myb-like DNA-binding domain PFAM PF00249
SENSOR HISTIDINE KINASE-RELATED Panther PTHR23283
response regulator 11 AT AT1G67710

Transferase family PFAM PF02458
transferase activity, transferring acyl groups other than amino-acyl groups PFAM PF02458
HXXXD-type acyl-transferase family protein AT AT3G26040

7S RNA binding PFAM PF08492
SIGNAL RECOGNITION PARTICLE-RELATED Panther PTHR14094
Signal recognition particle, subunit Srp72 KOG KOG2376
signal recognition particle subunit SRP72 KO K03108
SRP72 RNA-binding domain AT AT1G67680

F-BOX/LEUCINE RICH REPEAT PROTEIN Panther PTHR23125
F-BOX/LEUCINE RICH REPEAT PROTEIN Panther PTHR23125
Ribonuclease inhibitor AT AT3G26000

Family of unknown function (DUF706) PFAM PF05153
MYOINOSITOL OXYGENASE Panther PTHR12588
Aldehyde reductase KOG KOG1573
inositol oxygenase activity PFAM PF05153
inositol oxygenase activity Panther PTHR12588
Aldehyde reductase KOG KOG1573
myo-inositol oxygenase 4 AT AT4G26260

YqaJ viral recombinase family PFAM PF09588
UNCHARACTERIZED Panther PTHR10992:SF3
YqaJ-like viral recombinase domain PFAM PF09588
UNCHARACTERIZED Panther PTHR10992:SF3
Restriction endonuclease, type II-like superfamily protein AT AT1G67660

ABC transporter PFAM PF00005
ATP-BINDING CASSETTE TRANSPORTER Panther PTHR19242
Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily KOG KOG0054
ATPase activity, coupled to transmembrane movement of substances PFAM PF00664
ATPase activity PFAM PF00005
ATP-BINDING CASSETTE TRANSPORTER Panther PTHR19242
Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily KOG KOG0054
multidrug resistance-associated protein 3 AT AT3G13080

ATP-BINDING CASSETTE TRANSPORTER Panther PTHR19242
multidrug resistance-associated protein 14 AT AT3G59140

Ankyrin repeat PFAM PF00023
ANKYRIN REPEAT-CONTAINING Panther PTHR18958
protein binding PFAM PF00023
ANKYRIN REPEAT-CONTAINING Panther PTHR18958
Ankyrin repeat family protein AT AT3G01750

Transmembrane amino acid transporter protein PFAM PF01490
AMINO ACID TRANSPORTER Panther PTHR22950
Amino acid transporters KOG KOG1303
Transmembrane amino acid transporter protein PFAM PF01490
Tryptophan/tyrosine permease family PFAM PF03222
AMINO ACID TRANSPORTER Panther PTHR22950
Amino acid transporters KOG KOG1303
lysine histidine transporter 1 AT AT5G40780

Cation efflux family PFAM PF01545
CATION EFFLUX PROTEIN/ ZINC TRANSPORTER Panther PTHR11562
Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) KOG KOG1484
TC.CDF; cation efflux system protein, CDF family [COG:COG1230 COG0053 ] [TC:2.A.4 ] KO K03295
cation transmembrane transporter activity PFAM PF01545
cation transmembrane transporter activity Panther PTHR11562
Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) KOG KOG1484
cation efflux system protein, CDF family KO K03295
Cation efflux family protein AT AT2G04620

short chain dehydrogenase PFAM PF00106
SHORT-CHAIN DEHYDROGENASES/REDUCTASE Panther PTHR19410
Mitochondrial/plastidial beta-ketoacyl-ACP reductase KOG KOG1200
oxidoreductase activity PFAM PF00106
KR domain PFAM PF08659
SHORT-CHAIN DEHYDROGENASES/REDUCTASE Panther PTHR19410
Mitochondrial/plastidial beta-ketoacyl-ACP reductase KOG KOG1200
NAD(P)-binding Rossmann-fold superfamily protein AT AT1G24360

AT AT1G27850

Helicase conserved C-terminal domain PFAM PF00271
DNA HELICASE RECQ FAMILY MEMBER Panther PTHR13710
ATP-dependent DNA helicase KOG KOG0351
In phosphorous-containing anhydrides. EC 3.6.1.-
ATP-dependent DNA helicase Q4 [EC:3.6.4.12] KO K10730
ATP-dependent helicase activity PFAM PF00270
helicase activity PFAM PF00271
ATP-dependent helicase activity Panther PTHR13710
ATP-dependent DNA helicase KOG KOG0351
DNA helicase EC 3.6.4.12
ATP-dependent DNA helicase Q4 [EC:3.6.4.12] KO K10730
DEAD/DEAH box RNA helicase family protein AT AT1G27880

Divergent PAP2 family PFAM PF02681
hypothetical protein KO K09775
Divergent PAP2 family PFAM PF02681
hypothetical protein KO K09775
Acid phosphatase/vanadium-dependent haloperoxidase-related protein AT AT1G67600

Remorin, C-terminal region PFAM PF03763
Remorin, C-terminal region PFAM PF03763
Remorin family protein AT AT1G67590

Protein tyrosine kinase PFAM PF07714
CDC2-RELATED KINASE Panther PTHR11295
Protein kinase PITSLRE and related kinases KOG KOG0663
cyclin-dependent kinase EC 2.7.11.22
cell division cycle 2-like [EC:2.7.11.22] KO K08818
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
CDC2-RELATED KINASE Panther PTHR11295
Protein kinase PITSLRE and related kinases KOG KOG0663
cyclin-dependent kinase EC 2.7.11.22
cell division cycle 2-like [EC:2.7.11.22] KO K08818
Protein kinase superfamily protein AT AT1G67580

Protein of unknown function (DUF3537) PFAM PF12056
Protein of unknown function (DUF3537) AT AT1G67570

Lipoxygenase PFAM PF00305
LIPOXYGENASE Panther PTHR11771
Lipoxygenase. EC 1.13.11.12
lipoxygenase [EC:1.13.11.12] KO K00454
Activity=phytoene dehydrogenase; Pathway=jasmonic acid biosynthesis SoyCyc PWY-735
Activity=phytoene dehydrogenase; Pathway=traumatin and (Z)-3-hexen-1-yl acetate biosynthesis SoyCyc PWY-5410
Activity=phytoene dehydrogenase; Pathway=divinyl ether biosynthesis II 13-LOX SoyCyc PWY-5409
Activity=phytoene dehydrogenase; Pathway=trans-lycopene biosynthesis SoyCyc PWY-5942
Activity=phytoene dehydrogenase; Pathway=13-LOX and 13-HPL pathway SoyCyc PWY-5410
Activity=phytoene dehydrogenase; Pathway=superpathway of carotenoid biosynthesis SoyCyc CAROTENOID-PWY
Activity=phytoene dehydrogenase; Pathway=superpathway of lipoxygenase SoyCyc PWY-5433
Activity=phytoene dehydrogenase; Pathway=jasmonic acid biosynthesis SoyCyc PWY-735
protein binding PFAM PF01477
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen PFAM PF00305
metal ion binding Panther PTHR11771
linoleate 13S-lipoxygenase EC 1.13.11.12
lipoxygenase [EC:1.13.11.12] KO K00454
PLAT/LH2 domain-containing lipoxygenase family protein AT AT1G67560

Amidohydrolase family PFAM PF01979
Activity=urease; Pathway=urea degradation II SoyCyc PWY-5704
Activity=urease; Pathway=urea degradation II SoyCyc PWY-5704
urease activity PFAM PF00547
urease activity PFAM PF00699
urea metabolic process PFAM PF00449
hydrolase activity PFAM PF01979
urease AT AT1G67550

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