Genes Covered By A Chromosome Alteration FN300652.01.01.M4.1

Gene Name

Gene Annotation

Glyma05g17994

Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
myb domain protein 9 AT AT5G16770

Glyma05g18041

sequence-specific DNA binding transcription factor activity PFAM PF00847
AP2-like factor, euAP2 lineage KO K09284
Integrase-type DNA-binding superfamily protein AT AT4G36920

Glyma05g18088

xylose isomerase family protein AT AT5G57655

Glyma05g18136

PIF1 helicase PFAM PF05970
HELICASE-RELATED Panther PTHR10492
PIF1 helicase AT AT5G28780

Glyma05g18184

HELICASE-RELATED Panther PTHR10492

Glyma05g18232

SEC-C motif PFAM PF02810
UNCHARACTERIZED Panther PTHR12419
SEC-C motif-containing protein / OTU-like cysteine protease family protein AT AT5G67170

Glyma05g18280

AAA-FAMILY ATPASE Panther PTHR23077
ATP binding PFAM PF00004
AAA-FAMILY ATPASE Panther PTHR23077
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein AT AT2G25450

Glyma05g18295

Arabidopsis proteins of unknown function PFAM PF03080
Protein of Unknown Function (DUF239) AT AT1G55360

Glyma05g18310

Plant protein of unknown function (DUF869) PFAM PF05911
Plant protein of unknown function (DUF869) PFAM PF05911
Plant protein of unknown function (DUF869) AT AT2G23360

Glyma05g18326

intracellular PFAM PF00253
intracellular Panther PTHR19836
Mitochondrial/chloroplast ribosomal protein S14/S29 KOG KOG1741
small subunit ribosomal protein S14 KO K02954
mitochondrial ribosomal protein S14 AT AT2G34520

Glyma05g18342

oxidoreductase activity PFAM PF00033
oxidoreductase activity PFAM PF00032
respiratory electron transport chain Panther PTHR19271
Cytochrome b KOG KOG4663
Ubiquinol--cytochrome c reductase. EC 1.10.2.2
ubiquinol-cytochrome c reductase cytochrome b subunit [EC:1.10.2.2] KO K00412
Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal AT AT2G07727

Glyma05g18359

phosphate binding PFAM PF00737
photosystem II reaction center protein H AT ATCG00710

Glyma05g18376

Glyma05g18393

ATP binding PFAM PF00006
ATP hydrolysis coupled proton transport PFAM PF00306
ATP SYNTHASE Panther PTHR15184
F0F1-type ATP synthase, alpha subunit KOG KOG1353
ATPase, F1 complex, alpha subunit protein AT AT2G07698

Glyma05g18410

Transferase family PFAM PF02458
transferase activity, transferring acyl groups other than amino-acyl groups PFAM PF02458
HXXXD-type acyl-transferase family protein AT AT5G67150

Glyma05g18620

SNRNP SM FAMILY MEMBER Panther PTHR11193
LSM domain PFAM PF01423
SNRNP SM FAMILY MEMBER Panther PTHR11193
Small nuclear ribonucleoprotein family protein AT AT4G30330

Glyma05g18835

Putative cyclase PFAM PF04199
Cyclase family protein AT AT4G35220

Glyma05g19050

AP2 domain PFAM PF00847
sequence-specific DNA binding transcription factor activity PFAM PF00847
cooperatively regulated by ethylene and jasmonate 1 AT AT3G50260

Glyma05g19250

PLC-like phosphodiesterases superfamily protein AT AT5G67130

Glyma05g19332

Domain of unknown function DUF223 PFAM PF02721
Replication factor-A C terminal domain PFAM PF08646

Glyma05g19414

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT3G59040

Glyma05g19497

S-locus lectin protein kinase family protein AT AT4G21390

Glyma05g19580

Nicotinate phosphoribosyltransferase (NAPRTase) family PFAM PF04095
NICOTINATE PHOSPHORIBOSYLTRANSFERASE Panther PTHR11098
Nicotinic acid phosphoribosyltransferase KOG KOG2511
Nicotinate phosphoribosyltransferase. EC 2.4.2.11
E2.4.2.11, pncB; nicotinate phosphoribosyltransferase [EC:2.4.2.11 ] [COG:COG1488 ] [GO:0004516 ] KO K00763
pyridine nucleotide biosynthetic process GO GO:0019363
cellular_component GO GO:0005575
nicotinate nucleotide salvage GO GO:0019358
nicotinate phosphoribosyltransferase activity GO GO:0004516
nicotinate phosphoribosyltransferase activity PFAM PF04095
NICOTINATE PHOSPHORIBOSYLTRANSFERASE Panther PTHR11098
Nicotinic acid phosphoribosyltransferase KOG KOG2511
nicotinate phosphoribosyltransferase EC 2.4.2.11
nicotinate phosphoribosyltransferase [EC:2.4.2.11] KO K00763
nicotinate phosphoribosyltransferase 2 AT AT2G23420

Glyma05g19600

SUBFAMILY NOT NAMED Panther PTHR16212:SF4
SUBFAMILY NOT NAMED Panther PTHR16212:SF4
ARM repeat superfamily protein AT AT3G27670

Glyma05g19611

Ribosomal protein S21 family protein AT AT3G27160

Glyma05g19620

Harpin-induced protein 1 (Hin1) PFAM PF07320
Late embryogenesis abundant protein PFAM PF03168
AT AT1G45688

Glyma05g19630

Protein kinase domain PFAM PF00069
MAPKK-RELATED SERINE/THREONINE PROTEIN KINASES Panther PTHR22986
MEKK and related serine/threonine protein kinases KOG KOG0198
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
MAPKK-RELATED SERINE/THREONINE PROTEIN KINASES Panther PTHR22986
MEKK and related serine/threonine protein kinases KOG KOG0198
mitogen-activated protein kinase kinase kinase 21 AT AT4G36950

Glyma05g19661

NADH DEHYDROGENASE Panther PTHR22773
NADH:ubiquinone reductase (H+-translocating) EC 1.6.5.3
NADH dehydrogenase I subunit 2 [EC:1.6.5.3] KO K05573
NADH-Ubiquinone/plastoquinone (complex I) protein AT ATCG00890

Glyma05g19690

2OG-Fe(II) oxygenase superfamily PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
oxidoreductase activity PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein AT AT1G78550

Glyma05g19747

Glyma05g19804

GAG/POL/ENV POLYPROTEIN Panther PTHR10178

Glyma05g19862

Protein of unknown function, DUF547 AT AT5G60720

Glyma05g19920

Helix-loop-helix DNA-binding domain PFAM PF00010
CENTROMERE-BINDING PROTEIN 1, CBP-1 Panther PTHR12565:SF7
transcription regulator activity PFAM PF00010
CENTROMERE-BINDING PROTEIN 1, CBP-1 Panther PTHR12565:SF7
basic helix-loop-helix (bHLH) DNA-binding superfamily protein AT AT5G67060

Glyma05g20150

PYRUVATE KINASE Panther PTHR11817
potassium ion binding PFAM PF00224
Pyruvate kinase, alpha/beta domain PFAM PF02887
potassium ion binding Panther PTHR11817
Pyruvate kinase family protein AT AT3G52990

Glyma05g20160

Lipase (class 3) PFAM PF01764
triglyceride lipase activity PFAM PF01764
alpha/beta-Hydrolases superfamily protein AT AT5G42930

Glyma05g20221

cytomatrix protein-related AT AT1G19980

Glyma05g20280

cellular iron ion homeostasis PFAM PF00210
cellular iron ion homeostasis Panther PTHR11431
ferritin 2 AT AT3G11050

Glyma05g20340

Remorin, C-terminal region PFAM PF03763
Remorin family protein AT AT1G45207

Glyma05g20400

Amino acid kinase family protein AT AT3G18680

Glyma05g20460

HEAT SHOCK TRANSCRIPTION FACTOR Panther PTHR10015
sequence-specific DNA binding PFAM PF00447
HEAT SHOCK TRANSCRIPTION FACTOR Panther PTHR10015
heat shock factor 4 AT AT4G36990

Glyma05g20485

Spliceosome subunit KOG KOG0796
AT AT3G50370

Glyma05g20510

Dihydrouridine synthase (Dus) PFAM PF01207
TRNA-DIHYDROURIDINE SYNTHASE Panther PTHR11082
tRNA-dihydrouridine synthase KOG KOG2335
Oxidoreductases. EC 1.-.-.-
DUS4; tRNA-dihydrouridine synthase 4 [EC:1.-.-.- ] [COG:COG0042 ] [GO:0017150 ] KO K05545
tRNA dihydrouridine synthase activity PFAM PF01207
histidine biosynthetic process PFAM PF00977
tRNA dihydrouridine synthase activity Panther PTHR11082
tRNA-dihydrouridine synthase KOG KOG2335
Oxidoreductases. EC 1.-.-.-
tRNA-dihydrouridine synthase 4 [EC:1.-.-.-] KO K05545
FMN-linked oxidoreductases superfamily protein AT AT5G67220

Glyma05g20710

WRKY DNA -binding domain PFAM PF03106
Plant zinc cluster domain PFAM PF10533
sequence-specific DNA binding PFAM PF03106
WRKY DNA-binding protein 15 AT AT2G23320

Glyma05g20910

Glycosyltransferase family 43 PFAM PF03360
BETA-1,3-GLUCURONYLTRANSFERASE Panther PTHR10896
Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 KOG KOG1476
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity PFAM PF03360
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity Panther PTHR10896
Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 KOG KOG1476
Nucleotide-diphospho-sugar transferases superfamily protein AT AT5G67230

Glyma05g20930

Papain family cysteine protease PFAM PF00112
CYSTEINE PROTEASE FAMILY C1-RELATED Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
Cathepsin propeptide inhibitor domain (I29) PFAM PF08246
cysteine-type peptidase activity PFAM PF00112
cysteine-type peptidase activity Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
Granulin repeat cysteine protease family protein AT AT1G47128

Glyma05g20940

Rer1 family PFAM PF03248
RER1 PROTEIN Panther PTHR10743
Golgi proteins involved in ER retention (RER) KOG KOG1688
integral to membrane PFAM PF03248
integral to membrane Panther PTHR10743
Golgi proteins involved in ER retention (RER) KOG KOG1688
Rer1 family protein AT AT4G39220

Glyma05g20956

TRANSPOSASE-LIKE PROTEIN Panther PTHR11697:SF9
TTF-type zinc finger protein with HAT dimerisation domain AT AT1G19260

Glyma05g20973

protein binding PFAM PF00646
F-BOX/LEUCINE RICH REPEAT PROTEIN Panther PTHR23125
Leucine rich repeat proteins, some proteins contain F-box KOG KOG1947
SKP1/ASK1-interacting protein 2 AT AT5G67250

Glyma05g20990

Cyclin, C-terminal domain PFAM PF02984
CYCLINS Panther PTHR10177
G1/S-specific cyclin D KOG KOG0656
Cyclin, N-terminal domain PFAM PF00134
nucleus PFAM PF02984
CYCLINS Panther PTHR10177
G1/S-specific cyclin D KOG KOG0656
cyclin D3, plant KO K14505
CYCLIN D3;2 AT AT5G67260

Glyma05g21030

Protein kinase domain PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine rich repeat N-terminal domain PFAM PF08263
protein binding PFAM PF00560
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine-rich repeat protein kinase family protein AT AT4G37250

Glyma05g21050

DNAJ (HSP40) HOMOLOG, SUBFAMILY C, MEMBER 3 Panther PTHR11821:SF68
DNAJ (HSP40) HOMOLOG, SUBFAMILY C, MEMBER 3 Panther PTHR11821:SF68
homolog of mamallian P58IPK AT AT5G03160

Glyma05g21081

Pectate lyase PFAM PF00544
Pectin lyase-like superfamily protein AT AT3G53190

Glyma05g21110

FAD dependent oxidoreductase PFAM PF01266
FAD NAD BINDING OXIDOREDUCTASES Panther PTHR13847
Possible oxidoreductase KOG KOG2852
Pyridine nucleotide-disulphide oxidoreductase PFAM PF00070
oxidoreductase activity PFAM PF01266
monooxygenase activity PFAM PF01494
tRNA processing PFAM PF01134
FAD NAD BINDING OXIDOREDUCTASES Panther PTHR13847
Possible oxidoreductase KOG KOG2852
FAD-dependent oxidoreductase family protein AT AT5G67290

Glyma05g21137

cysteine-type endopeptidase activity PFAM PF01650
cysteine-type endopeptidase activity Panther PTHR12000
beta vacuolar processing enzyme AT AT1G62710

Glyma05g21164

potassium ion binding PFAM PF00224
potassium ion binding Panther PTHR11817
Pyruvate kinase KOG KOG2323
Pyruvate kinase family protein AT AT3G52990

Glyma05g21192

DNA binding PFAM PF02892

Glyma05g21220

Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
myb proto-oncogene protein, plant KO K09422
Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
myb proto-oncogene protein, plant KO K09422
myb domain protein 73 AT AT4G37260

Glyma05g21240

Protein of unknown function (DUF581) PFAM PF04570
Protein of unknown function (DUF581) PFAM PF04570
Protein of unknown function (DUF581) AT AT1G53903

Glyma05g21260

LIPOXYGENASE Panther PTHR11771
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen PFAM PF00305
metal ion binding Panther PTHR11771
lipoxygenase 1 AT AT1G55020

Glyma05g21270

Plant phosphoribosyltransferase C-terminal PFAM PF08372
SYNAPTOTAGMIN Panther PTHR10024
protein binding PFAM PF00168
Plant phosphoribosyltransferase C-terminal PFAM PF08372
SYNAPTOTAGMIN Panther PTHR10024
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein AT AT3G03680

Glyma05g21280

haloacid dehalogenase-like hydrolase PFAM PF00702
CATION-TRANSPORTING ATPASE Panther PTHR11939
Cation transport ATPase KOG KOG0207
Activity=calcium-transporting ATPase; Pathway=betanidin degradation SoyCyc PWY-5461
nucleotide binding PFAM PF00122
catalytic activity PFAM PF00702
CATION-TRANSPORTING ATPASE Panther PTHR11939
Cation transport ATPase KOG KOG0207
heavy metal atpase 1 AT AT4G37270

Glyma05g21295

nucleic acid binding PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432

Glyma05g21310

Glyma05g21320

MRG PFAM PF05712
MALE-SPECIFIC LETHAL-3 - RELATED Panther PTHR10880
Dosage compensation regulatory complex/histone acetyltransferase complex, subunit MSL-3/MRG15/EAF3, and related CHROMO domain-containing proteins KOG KOG3001
RNA binding activity-knot of a chromodomain PFAM PF11717
nucleus PFAM PF05712
nucleus Panther PTHR10880
Dosage compensation regulatory complex/histone acetyltransferase complex, subunit MSL-3/MRG15/EAF3, and related CHROMO domain-containing proteins KOG KOG3001
mortality factor 4-like protein 1 KO K11339
MRG family protein AT AT4G37280

Glyma05g21333

Copper transport protein family AT AT3G25855

Glyma05g21346

proton-transporting two-sector ATPase complex, proton-transporting domain PFAM PF00137
H+-transporting two-sector ATPase EC 3.6.3.14
F-type H+-transporting ATPase subunit c [EC:3.6.3.14] KO K02110
ATP synthase subunit C family protein AT ATCG00140

Glyma05g21360

AT AT4G37290

Glyma05g21365

PHOSPHOGLUCOMUTASE Panther PTHR22573:SF4
phosphoglucosamine mutase family protein AT AT5G17530

Glyma05g21370

Ribosomal protein S26e PFAM PF01283
40S RIBOSOMAL PROTEIN S26 Panther PTHR12538
40s ribosomal protein S26 KOG KOG1768
RP-S26e, RPS26; small subunit ribosomal protein S26e [GO:0005843 ] KO K02976
chloroplast GO GO:0009507
cytosolic small ribosomal subunit GO GO:0022627
membrane GO GO:0016020
ribosome biogenesis GO GO:0042254
cytosolic ribosome GO GO:0022626
translation GO GO:0006412
ribosome GO GO:0005840
structural constituent of ribosome GO GO:0003735
intracellular PFAM PF01283
intracellular Panther PTHR12538
40s ribosomal protein S26 KOG KOG1768
small subunit ribosomal protein S26e KO K02976
Ribosomal protein S26e family protein AT AT2G40510

Glyma05g21400

Glyma05g21411

Glyma05g21420

Protein kinase domain PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
protein phosphorylation PFAM PF07714
Protein kinase domain PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Protein kinase superfamily protein AT AT2G23200

Glyma05g21440

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Di-glucose binding within endoplasmic reticulum PFAM PF11721
protein phosphorylation PFAM PF00069
protein phosphorylation PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Protein kinase superfamily protein AT AT2G23200

Glyma05g21470

Armadillo/beta-catenin-like repeat PFAM PF00514
hydrolase activity, acting on acid anhydrides PFAM PF05879
plant U-box 8 AT AT4G21350

Glyma05g21483

double-stranded RNA binding PFAM PF00035
dsRNA-binding protein 2 AT AT2G28380

Glyma05g21496

SOLUTE CARRIER FAMILY 35 Panther PTHR11132
Nucleotide-sugar transporter family protein AT AT5G05820

Glyma05g21510

DENN (AEX-3) domain-containing protein AT AT5G35560

Glyma05g21531

RAD50 - RELATED Panther PTHR18937:SF8
Structural maintenance of chromosomes (SMC) family protein AT AT2G27170

Glyma05g21551

DNA binding PFAM PF02892
Protein of unknown function (DUF 659) PFAM PF04937
protein dimerization activity PFAM PF05699
hAT transposon superfamily AT AT4G15020

Glyma05g21570

Polyprenyl synthetase PFAM PF00348
gb def: putative isopentenyl pyrophosphate isomerase, fps [halobacterium sp. nrc-1] Panther PTHR12001:SF19
Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase KOG KOG0776
Activity=dimethylallyltranstransferase; Pathway=geranyl diphosphate biosynthesis SoyCyc PWY-5122
Activity=dimethylallyltranstransferase; Pathway=trans, trans-farnesyl diphosphate biosynthesis SoyCyc PWY-5123
Activity=dimethylallyltranstransferase; Pathway=superpathway of geranylgeranyldiphosphate biosynthesis II (via MEP) SoyCyc PWY-5121
Activity=dimethylallyltranstransferase; Pathway=superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) SoyCyc PWY-5910
Activity=dimethylallyltranstransferase; Pathway=superpathway of isoflavonoids (via naringenin) SoyCyc PWY-3097
Activity=dimethylallyltranstransferase; Pathway=kievitone biosynthesis SoyCyc PWY-4681
Activity=dimethylallyltranstransferase; Pathway=wighteone and luteone biosynthesis SoyCyc PWY-4502
Activity=dimethylallyltranstransferase; Pathway=Geranyldiphosphate biosynthesis SoyCyc PWY-5122
Activity=dimethylallyltranstransferase; Pathway=trans,trans-farnesyl diphosphate biosynthesis SoyCyc PWY-5123
Activity=dimethylallyltranstransferase; Pathway=superpathway of isoflavonoids via naringenin SoyCyc PWY-3097
Activity=dimethylallyltranstransferase; Pathway=superpathway of geranylgeranyldiphosphate biosynthesis II via MEP SoyCyc PWY-5121
Activity=dimethylallyltranstransferase; Pathway=superpathway of geranylgeranyldiphosphate biosynthesis I via mevalonate SoyCyc PWY-5910
Activity=dimethylallyltranstransferase; Pathway=kievitone biosynthesis SoyCyc PWY-4681
isoprenoid biosynthetic process PFAM PF00348
GERANYLGERANYL PYROPHOSPHATE SYNTHASE Panther PTHR12001
Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase KOG KOG0776
geranyl diphosphate synthase 1 AT AT2G34630
dimethylallyltranstransferase EC 2.5.1.1
geranyl diphosphate synthase [EC:2.5.1.1] KO K14066
Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase KOG KOG0777

Glyma05g21580

WD domain, G-beta repeat PFAM PF00400
WD40 REPEAT PROTEIN Panther PTHR22846
Beta-transducin family (WD-40 repeat) protein KOG KOG0273
LisH PFAM PF08513
WD domain, G-beta repeat PFAM PF00400
WD40 REPEAT PROTEIN Panther PTHR22846
Beta-transducin family (WD-40 repeat) protein KOG KOG0273
WD-40 repeat family protein AT AT5G67320

Glyma05g21600

SUBTILISIN/KEXIN-RELATED SERINE PROTEASE Panther PTHR10795
serine-type endopeptidase activity PFAM PF00082
SUBTILISIN/KEXIN-RELATED SERINE PROTEASE Panther PTHR10795
Subtilase family protein AT AT1G04110

Glyma05g21620

zinc finger protein 7 AT AT1G24625

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