SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Full functionality of the SoyBase site requires that JavaScript be enabled.

Please turn on JavaScript in your browser's preferences. If you are using a selective JavaScript blocking plugin such as NoScript, add
www.soybase.org to the exclude filter.

← Mutant Description Page

Genes Covered By A Chromosome Alteration FN300130.01.01.M4.4

Gene Name

Gene Annotation

ARF GTPase activator activity PFAM PF01412
CENTAURIN/ARF Panther PTHR23180
Predicted GTPase-activating protein KOG KOG0702
ArfGap/RecO-like zinc finger domain-containing protein AT AT4G32630

transport PFAM PF00916
molybdate transporter 1 AT AT2G25680

Plant organelle RNA recognition domain PFAM PF11955
Ubiquitin carboxyl-terminal hydrolase family protein AT AT4G08940

X8 domain PFAM PF07983
hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF00332
X8 domain PFAM PF07983
O-Glycosyl hydrolases family 17 protein AT AT3G13560

TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED Panther PTHR12228
TAFII55 protein conserved region PFAM PF04658
transcription factor TFIID complex PFAM PF04658
TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED Panther PTHR12228
TBP-associated factor 7 AT AT1G55300
transcription initiation factor TFIID subunit 7 KO K03132

Transcription factor Pcc1 PFAM PF09341
AT AT5G53045

zinc ion binding PFAM PF05495
Zinc finger, C3HC4 type (RING finger) PFAM PF00097
RING FINGER AND CHY ZINC FINGER DOMAIN CONTAINING 1 Panther PTHR21319
Zn-finger protein KOG KOG1940
CHY-type/CTCHY-type/RING-type Zinc finger protein AT AT5G25560

Protein of unknown function (DUF581) PFAM PF04570
Protein of unknown function (DUF581) PFAM PF04570
Protein of unknown function (DUF581) AT AT2G25690

VPRBP PROTEIN-RELATED Panther PTHR13129
DDB1-CUL4 associated factor 1 AT AT4G31160

Endonuclease V PFAM PF04493
SUBFAMILY NOT NAMED Panther PTHR21670:SF4
Predicted endonuclease KOG KOG4417
gb def: Hypothetical protein Panther PTHR21670:SF5
deoxyribonuclease V EC 3.1.21.7
deoxyribonuclease V [EC:3.1.21.7] KO K05982
DNA repair PFAM PF04493
SUBFAMILY NOT NAMED Panther PTHR21670:SF4
Predicted endonuclease KOG KOG4417
deoxyribonuclease V EC 3.1.21.7
deoxyribonuclease V [EC:3.1.21.7] KO K05982
endonuclease V family protein AT AT4G31150

X8 domain PFAM PF07983
hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF00332
X8 domain PFAM PF07983
O-Glycosyl hydrolases family 17 protein AT AT4G31140

HEMOLYSIN-RELATED Panther PTHR22777
Domain of unknown function DUF21 PFAM PF01595
HEMOLYSIN-RELATED Panther PTHR22777
CBS domain-containing protein / transporter associated domain-containing protein AT AT3G13070

Protein of unknown function (DUF1218) PFAM PF06749
Protein of unknown function (DUF1218) PFAM PF06749
Protein of unknown function (DUF1218) AT AT4G31130

Transcription factor Pcc1 PFAM PF09341
AT AT5G53045

cwf21 PFAM PF08312
Splicing coactivator SRm160/300, subunit SRm300 KOG KOG1869
AT AT3G49601

Protein of unknown function (DUF1997) PFAM PF09366
Protein of unknown function (DUF1997) AT AT4G31115

mRNA processing PFAM PF01824
mRNA processing PFAM PF01348
FAMILY NOT NAMED Panther PTHR21464
maturase K AT ATCG00040

NADH dehydrogenase activity PFAM PF05676
NADH dehydrogenase activity Panther PTHR20900
NADH:ubiquinone oxidoreductase, NDUFB7/B18 subunit KOG KOG3468
NADH-ubiquinone oxidoreductase B18 subunit, putative AT AT2G02050

MraW methylase family PFAM PF01795
S-ADENOSYL-METHYLTRANSFERASE MRAW Panther PTHR11265
Putative SAM dependent methyltransferases KOG KOG2782
methyltransferase activity PFAM PF01795
methyltransferase activity Panther PTHR11265
Putative SAM dependent methyltransferases KOG KOG2782
mraW methylase family protein AT AT5G10910

Ggamma-subunit 1 AT AT3G63420

Ubiquitin carboxyl-terminal hydrolase PFAM PF00443
UBIQUITIN SPECIFIC PROTEASE FAMILY C19-RELATED Panther PTHR10420
Ubiquitin carboxyl-terminal hydrolase KOG KOG1863
ubiquitin thiolesterase activity PFAM PF00443
UBIQUITIN SPECIFIC PROTEASE FAMILY C19-RELATED Panther PTHR10420
Ubiquitin carboxyl-terminal hydrolase KOG KOG1863
ubiquitin thiolesterase EC 3.1.2.15
ubiquitin carboxyl-terminal hydrolase 48 [EC:3.1.2.15] KO K11858
ubiquitin-specific protease 26 AT AT3G49600

Predicted integral membrane metal-binding protein (DUF2296) PFAM PF10058
FAMILY NOT NAMED Panther PTHR22166
Predicted membrane protein KOG KOG2846
Predicted integral membrane metal-binding protein (DUF2296) PFAM PF10058
FAMILY NOT NAMED Panther PTHR22166
Predicted membrane protein KOG KOG2846
Protein of unknown function (DUF2296) AT AT4G31080

Predicted SPOUT methyltransferase PFAM PF02590
hypothetical protein KO K00783
rRNA processing PFAM PF02590
hypothetical protein KO K00783
methyltransferases AT AT5G10620

structural molecule activity PFAM PF04755
Plastid-lipid associated protein PAP / fibrillin family protein AT AT5G19940

Domain of unknown function, DUF266 PFAM PF03267
membrane PFAM PF02485
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein AT AT4G31350

AT AT5G38880

SUBFAMILY NOT NAMED Panther PTHR21251:SF7
SUBFAMILY NOT NAMED Panther PTHR21251:SF7
selenium binding AT AT4G31360

Fasciclin domain PFAM PF02469
FASCICLIN-like arabinogalactan protein 3 precursor AT AT2G24450

flowering promoting factor 1 AT AT5G24860

Replication protein A C terminal PFAM PF08784
REPLICATION PROTEIN A-RELATED Panther PTHR13989
Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit KOG KOG3108
replication factor A2 KO K10739
nucleic acid binding PFAM PF01336
Replication protein A C terminal PFAM PF08784
REPLICATION PROTEIN A-RELATED Panther PTHR13989
Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit KOG KOG3108
replication factor A2 KO K10739
replicon protein A2 AT AT2G24490

CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, ALPHA SUBUNIT, TCPA Panther PTHR11353:SF20
CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, ALPHA SUBUNIT, TCPA Panther PTHR11353:SF20
aminopeptidase P1 AT AT4G36760

embryo defective 2737 AT AT5G53860

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain