Genes Covered By A Chromosome Alteration FN300096.01.01.M4.5

Gene Name

Gene Annotation

Glyma14g10290

Squalene epoxidase PFAM PF08491
MONOOXYGENASE Panther PTHR13789
Squalene monooxygenase KOG KOG1298
Squalene monooxygenase. EC 1.14.99.7
E1.14.99.7, SQLE; squalene monooxygenase [EC:1.14.99.7 ] [GO:0004506 ] KO K00511
response to jasmonic acid stimulus GO GO:0009753
response to wounding GO GO:0009611
response to water deprivation GO GO:0009414
squalene monooxygenase activity GO GO:0004506
sterol biosynthetic process GO GO:0016126
Activity=squalene_epoxidase; Pathway=plant sterol biosynthesis SoyCyc PWY-2541
Activity=squalene_epoxidase; Pathway=cholesterol biosynthesis I SoyCyc PWY66-341
Activity=squalene_epoxidase; Pathway=epoxysqualene biosynthesis SoyCyc PWY-5670
Activity=squalene_epoxidase; Pathway=plant sterol biosynthesis SoyCyc PWY-2541
Activity=squalene_epoxidase; Pathway=cholesterol biosynthesis I SoyCyc PWY66-341
Activity=squalene_epoxidase; Pathway=cholesterol biosynthesis III via desmosterol SoyCyc PWY66-4
Activity=squalene_epoxidase; Pathway=ergosterol biosynthesis SoyCyc ERGOSTEROL-SYN-PWY
Activity=squalene_epoxidase; Pathway=epoxysqualene biosynthesis SoyCyc PWY-5670
Activity=squalene_epoxidase; Pathway=cholesterol biosynthesis II via 24,25-dihydrolanosterol SoyCyc PWY66-3
Thi4 family PFAM PF01946
monooxygenase activity PFAM PF01494
oxidoreductase activity PFAM PF00890
squalene monooxygenase activity PFAM PF08491
MONOOXYGENASE Panther PTHR13789
Squalene monooxygenase KOG KOG1298
transferred now EC 1.14.13.132 EC 1.14.99.7
squalene monooxygenase [EC:1.14.99.7] KO K00511
FAD/NAD(P)-binding oxidoreductase family protein AT AT1G58440

Glyma14g10300

DnaJ domain PFAM PF00226
DNAJ/HSP40 Panther PTHR11821
heat shock protein binding PFAM PF00226
DNAJ/HSP40 Panther PTHR11821
Chaperone DnaJ-domain superfamily protein AT AT4G07990

Glyma14g10310

Methyltransferase domain PFAM PF08241
AT AT3G49720

Glyma14g10320

Domain of unknown function DUF221 PFAM PF02714
PROBABLE MEMBRANE PROTEIN DUF221-RELATED Panther PTHR13018
Uncharacterized conserved protein KOG KOG1134
membrane PFAM PF02714
PROBABLE MEMBRANE PROTEIN DUF221-RELATED Panther PTHR13018
Uncharacterized conserved protein KOG KOG1134
lipases;hydrolases, acting on ester bonds AT AT1G58520

Glyma14g10330

embryo defective 1273 AT AT1G49510

Glyma14g10340

Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Transcription factor, Myb superfamily KOG KOG0048
myb proto-oncogene protein, plant KO K09422
Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Transcription factor, Myb superfamily KOG KOG0048
myb proto-oncogene protein, plant KO K09422
myb domain protein 84 AT AT3G49690

Glyma14g10370

Homeobox associated leucine zipper PFAM PF02183
HOMEOBOX PROTEIN Panther PTHR19418
sequence-specific DNA binding PFAM PF00046
nucleus PFAM PF02183
HOMEOBOX PROTEIN Panther PTHR19418
homeobox from Arabidopsis thaliana AT AT5G06710

Glyma14g10401

nucleic acid binding PFAM PF00098
zinc ion binding;nucleic acid binding AT AT2G01050

Glyma14g10430

ELK domain PFAM PF03789
HOMEOBOX PROTEIN Panther PTHR11850
Transcription factor MEIS1 and related HOX domain proteins KOG KOG0773
nucleus PFAM PF03790
nucleus PFAM PF03791
nucleus PFAM PF03789
PFAM PF05920
sequence-specific DNA binding PFAM PF00046
HOMEOBOX PROTEIN Panther PTHR11850
Transcription factor MEIS1 and related HOX domain proteins KOG KOG0773
KNOTTED-like from Arabidopsis thaliana AT AT4G08150

Glyma14g10456

hydrolase activity, acting on glycosyl bonds PFAM PF02018
hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF00331
glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein AT AT1G58370

Glyma14g10483

Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Transcription factor, Myb superfamily KOG KOG0048
myb proto-oncogene protein, plant KO K09422
myb domain protein 68 AT AT5G65790
myb domain protein 87 AT AT4G37780

Glyma14g10510

ENTH domain PFAM PF01417
EPSIN/ENT-RELATED Panther PTHR12276
Equilibrative nucleoside transporter protein KOG KOG2056
ENTH domain PFAM PF01417
EPSIN/ENT-RELATED Panther PTHR12276
Equilibrative nucleoside transporter protein KOG KOG2056
ENTH/VHS family protein AT AT5G11710

Glyma14g10520

KH domain PFAM PF00013
POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED Panther PTHR12124
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process PFAM PF01612
RNA binding PFAM PF00013
POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED Panther PTHR12124
3\'-5\' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein AT AT2G25910

Glyma14g10530

hydroxyproline-rich glycoprotein family protein AT AT2G25930

Glyma14g10541

Arabidopsis proteins of unknown function PFAM PF03080
Protein of Unknown Function (DUF239) AT AT5G25950
Protein of Unknown Function (DUF239) AT AT1G55360

Glyma14g10550

Transketolase, C-terminal domain PFAM PF02780
DEHYDROGENASE RELATED Panther PTHR11624
Pyruvate dehydrogenase E1, beta subunit KOG KOG0524
Transketolase, pyrimidine binding domain PFAM PF02779
catalytic activity PFAM PF02780
DEHYDROGENASE RELATED Panther PTHR11624
Pyruvate dehydrogenase E1, beta subunit KOG KOG0524
Transketolase family protein AT AT2G34590

Glyma14g10561

tRNA binding PFAM PF01409
aminoacyl-tRNA ligase activity PFAM PF00152
PHENYLALANYL-TRNA SYNTHETASE RELATED Panther PTHR11538
phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative AT AT4G39280

Glyma14g10571

Eukaryotic protein of unknown function (DUF866) PFAM PF05907
UNCHARACTERIZED Panther PTHR12857
Uncharacterized conserved protein KOG KOG1296
AT AT4G32930

Glyma14g10580

Domain of unknown function, DUF266 PFAM PF03267
membrane PFAM PF02485
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein AT AT5G11730

Glyma14g10590

Glyma14g10605

Protein of unknown function (DUF1639) PFAM PF07797
Protein of unknown function (DUF1639) AT AT1G55340

Glyma14g10620

Peptidase C13 family PFAM PF01650
HEMOGLOBINASE FAMILY MEMBER Panther PTHR12000
Asparaginyl peptidases KOG KOG1348
cathepsin V [EC:3.4.22.43] KO K01376
cysteine-type endopeptidase activity PFAM PF01650
cysteine-type endopeptidase activity Panther PTHR12000
Asparaginyl peptidases KOG KOG1348
legumain EC 3.4.22.34
legumain [EC:3.4.22.34] KO K01369
gamma vacuolar processing enzyme AT AT4G32940
alpha-vacuolar processing enzyme AT AT2G25940

Glyma14g10633

PHAX RNA-binding domain PFAM PF10258
CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 Panther PTHR13135
AT AT3G20430

Glyma14g10646

PROTEIN PHOSPHATASE 2C Panther PTHR13832
Protein phosphatase 2C family protein AT AT5G26010

Glyma14g10660

Metallothionein PFAM PF01439
metal ion binding PFAM PF01439
metallothionein 2A AT AT3G09390

Glyma14g10670

KH domain PFAM PF07650
RNA-BINDING PROTEIN RELATED Panther PTHR10288
K-homology type RNA binding proteins KOG KOG1676
RNA binding PFAM PF00013
KH domain PFAM PF07650
RNA-BINDING PROTEIN RELATED Panther PTHR10288
K-homology type RNA binding proteins KOG KOG1676
far upstream element-binding protein KO K13210
KH domain-containing protein AT AT2G25970

Glyma14g10680

NADH ubiquinone oxidoreductase, 20 Kd subunit PFAM PF01058
NADH DEHYDROGENASE Panther PTHR11995
NADH-ubiquinone oxidoreductase, NUFS7/PSST/20 kDa subunit KOG KOG1687
NADH dehydrogenase (ubiquinone). EC 1.6.5.3
NDUFS7; NADH dehydrogenase (ubiquinone) Fe-S protein 7 [EC:1.6.5.3 1.6.99.3 ] [GO:0008137 0003954 ] KO K03940
NADH dehydrogenase. EC 1.6.99.3
NADH dehydrogenase (ubiquinone) activity PFAM PF01058
4 iron, 4 sulfur cluster binding Panther PTHR11995
NADH-ubiquinone oxidoreductase, NUFS7/PSST/20 kDa subunit KOG KOG1687
NADH:ubiquinone reductase (H+-translocating) EC 1.6.5.3
NADH dehydrogenase EC 1.6.99.3
NADH dehydrogenase (ubiquinone) Fe-S protein 7 [EC:1.6.5.3 1.6.99.3] KO K03940
NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial AT AT5G11770

Glyma14g10701

AT AT5G11780

Glyma14g10720

Ndr family PFAM PF03096
N-MYC DOWNSTREAM REGULATED Panther PTHR11034
Differentiation-related gene 1 protein (NDR1 protein), related proteins KOG KOG2931
Ndr family PFAM PF03096
alpha/beta hydrolase fold PFAM PF00561
N-MYC DOWNSTREAM REGULATED Panther PTHR11034
Differentiation-related gene 1 protein (NDR1 protein), related proteins KOG KOG2931
N-MYC downregulated-like 2 AT AT5G11790
N-MYC downregulated-like 1 AT AT5G56750

Glyma14g10730

Polyketide cyclase / dehydrase and lipid transport PFAM PF10604
Polyketide cyclase / dehydrase and lipid transport PFAM PF10604
response to biotic stimulus PFAM PF00407
abscisic acid receptor PYR/PYL family KO K14496
PYR1-like 2 AT AT2G26040

Glyma14g10740

Myb-like DNA-binding domain PFAM PF00249
TELOMERIC REPEAT BINDING PROTEIN Panther PTHR21717:SF7
Myb-like DNA-binding domain PFAM PF00249
TRANSCRIPTIONAL ADAPTOR 2 (ADA2)-RELATED Panther PTHR12374
myb-like transcription factor family protein AT AT5G47390

Glyma14g10750

Sodium/hydrogen exchanger family PFAM PF00999
FAMILY NOT NAMED Panther PTHR16254
Predicted K+/H+-antiporter KOG KOG1650
integral to membrane GO GO:0016021
endomembrane system GO GO:0012505
transmembrane transport GO GO:0055085
membrane GO GO:0016020
potassium:hydrogen antiporter activity GO GO:0015386
potassium ion transmembrane transporter activity GO GO:0015079
potassium ion transport GO GO:0006813
cation transport GO GO:0006812
cation transport PFAM PF00999
POTASSIUM/PROTON ANTIPORTER-RELATED Panther PTHR16254
Predicted K+/H+-antiporter KOG KOG1650
K+ efflux antiporter 6 AT AT5G11800

Glyma14g10760

AT AT5G11810

Glyma14g10770

Protein of unknown function (DUF778) PFAM PF05608
FAMILY NOT NAMED Panther PTHR20921
Uncharacterized conserved protein KOG KOG3150
Protein of unknown function (DUF778) PFAM PF05608
UNCHARACTERIZED Panther PTHR20921
Uncharacterized conserved protein KOG KOG3150
Protein of unknown function (DUF778) AT AT2G26070

Glyma14g10780

Protein of unknown function (DUF1230) PFAM PF06799
Protein of unknown function (DUF1230) PFAM PF06799
Protein of unknown function (DUF1230) AT AT5G11840

Glyma14g10790

Protein kinase domain PFAM PF00069
SERINE-THREONINE PROTEIN KINASE Panther PTHR23257
Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs KOG KOG0192
mitogen-activated protein kinase kinase kinase EC 2.7.11.25
ZAK, MLTK; sterile alpha motif and leucine zipper containing kinase AZK KO K04424
Protein tyrosine kinase PFAM PF07714
Serine/threonine protein kinase KOG KOG0580
protein phosphorylation PFAM PF07714
Protein kinase domain PFAM PF00069
SERINE-THREONINE PROTEIN KINASE Panther PTHR23257
Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs KOG KOG0192
mitogen-activated protein kinase kinase kinase EC 2.7.11.25
sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25] KO K04424
Protein kinase superfamily protein AT AT5G11850
Serine/threonine protein kinase KOG KOG0580

Glyma14g10801

Hydroxyproline-rich glycoprotein family protein AT AT3G25690

Glyma14g10810

AT AT5G60030

Glyma14g10820

Glycine cleavage system P-protein PFAM PF02347
GLYCINE DEHYDROGENASE Panther PTHR11773
Glycine dehydrogenase (decarboxylating) KOG KOG2040
Glycine dehydrogenase (decarboxylating). EC 1.4.4.2
E1.4.4.2A, gcvPA; glycine dehydrogenase subunit 1 [EC:1.4.4.2 ] [COG:COG0403 ] [GO:0004375 ] KO K00282
E1.4.4.2B, gcvPB; glycine dehydrogenase subunit 2 [EC:1.4.4.2 ] [COG:COG1003 ] [GO:0004375 ] KO K00283
ATP binding GO GO:0005524
oxidation-reduction process GO GO:0055114
glycine metabolic process GO GO:0006544
response to cadmium ion GO GO:0046686
protein binding GO GO:0005515
apoplast GO GO:0048046
chloroplast GO GO:0009507
mitochondrion GO GO:0005739
glycine catabolic process GO GO:0006546
chloroplast envelope GO GO:0009941
glycine decarboxylation via glycine cleavage system GO GO:0019464
glycine cleavage complex GO GO:0005960
glycine dehydrogenase (decarboxylating) activity GO GO:0004375
Activity=glycine dehydrogenase (decarboxylating); Pathway=glycine cleavage complex SoyCyc GLYCLEAV-PWY
Activity=Glycine dehydrogenase decarboxylating; Pathway=Glycine cleavage complex SoyCyc GLYCLEAV-PWY
glycine dehydrogenase (decarboxylating) activity PFAM PF02347
lyase activity PFAM PF01212
glycine dehydrogenase (decarboxylating) activity Panther PTHR11773
Glycine dehydrogenase (decarboxylating) KOG KOG2040
glycine dehydrogenase (decarboxylating) EC 1.4.4.2
glycine dehydrogenase [EC:1.4.4.2] KO K00281
glycine decarboxylase P-protein 2 AT AT2G26080

Glyma14g10830

GATA zinc finger PFAM PF00320
TRANSCRIPTION FACTOR GATA (GATA BINDING FACTOR) Panther PTHR10071
sequence-specific DNA binding PFAM PF00320
TRANSCRIPTION FACTOR GATA (GATA BINDING FACTOR) Panther PTHR10071
cytokinin-responsive gata factor 1 AT AT4G26150

Glyma14g10841

metal ion transport PFAM PF02535
ZINC-IRON TRANSPORTER Panther PTHR11040
Fe2+/Zn2+ regulated transporter KOG KOG1558
zinc transporter 4 precursor AT AT1G10970

Glyma14g10850

ParA/MinD ATPase like PFAM PF10609
NUCLEOTIDE-BINDING PROTEIN NBP35(YEAST)-RELATED Panther PTHR23264
Predicted ATPase, nucleotide-binding KOG KOG3022
Anion-transporting ATPase PFAM PF02374
PFAM PF09140
CobQ/CobB/MinD/ParA nucleotide binding domain PFAM PF01656
ParA/MinD ATPase like PFAM PF10609
NUCLEOTIDE-BINDING PROTEIN NBP35(YEAST)-RELATED Panther PTHR23264
Predicted ATPase, nucleotide-binding KOG KOG3022
nucleotide binding protein 35 AT AT5G50960

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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