Genes Covered By A Chromosome Alteration FN300080.01.01.M4.4

Gene Name

Gene Annotation

Glyma18g03220

Chlorophyll A-B binding protein PFAM PF00504
CHLOROPHYLL A/B BINDING PROTEIN Panther PTHR21649
light-harvesting complex II chlorophyll a/b binding protein 4 KO K08915
Chlorophyll A-B binding protein PFAM PF00504
photosynthesis, light harvesting Panther PTHR21649
light harvesting complex photosystem II AT AT2G40100

Glyma18g03231

Yippee putative zinc-binding protein PFAM PF03226
FAD NAD BINDING OXIDOREDUCTASES Panther PTHR13847
Predicted Yippee-type zinc-binding protein KOG KOG3399
Yippee family putative zinc-binding protein AT AT2G40110

Glyma18g03240

Arginine-tRNA-protein transferase, C terminus PFAM PF04377
FAMILY NOT NAMED Panther PTHR21367
Arginyl-tRNA-protein transferase KOG KOG1193
Arginyltransferase. EC 2.3.2.8
arginine-tRNA-protein transferase [EC:2.3.2.8] KO K00685
protein arginylation PFAM PF04376
protein arginylation PFAM PF04377
ARGININE-TRNA-PROTEIN TRANSFERASE 1 Panther PTHR21367
Arginyl-tRNA-protein transferase KOG KOG1193
arginyltransferase EC 2.3.2.8
arginine-tRNA-protein transferase [EC:2.3.2.8] KO K00685
arginine-tRNA protein transferase 1 AT AT5G05700

Glyma18g03250

AT AT2G40070

Glyma18g03256

chorismate binding enzyme PFAM PF00425
AMINOBENZOATE/ANTHRANILATE SYNTHASE Panther PTHR11236
ADC synthase superfamily protein AT AT3G55870

Glyma18g03263

oxo-acid-lyase activity PFAM PF04715
chorismate binding enzyme PFAM PF00425
AMINOBENZOATE/ANTHRANILATE SYNTHASE Panther PTHR11236
Isochorismate synthase KOG KOG1223
anthranilate synthase alpha subunit 1 AT AT5G05730

Glyma18g03270

chorismate binding enzyme PFAM PF00425
AMINOBENZOATE/ANTHRANILATE SYNTHASE Panther PTHR11236
Isochorismate synthase KOG KOG1223
Activity=anthranilate synthase; Pathway=tryptophan biosynthesis SoyCyc TRPSYN-PWY
Activity=anthranilate synthase; Pathway=tryptophan biosynthesis SoyCyc TRPSYN-PWY
Activity=anthranilate synthase; Pathway=superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis SoyCyc COMPLETE-ARO-PWY
oxo-acid-lyase activity PFAM PF04715
chorismate binding enzyme PFAM PF00425
AMINOBENZOATE/ANTHRANILATE SYNTHASE Panther PTHR11236
Isochorismate synthase KOG KOG1223
anthranilate synthase EC 4.1.3.27
anthranilate synthase component I [EC:4.1.3.27] KO K01657
anthranilate synthase alpha subunit 1 AT AT5G05730

Glyma18g03280

Transmembrane amino acid transporter protein PFAM PF01490
AMINO ACID TRANSPORTER Panther PTHR22950
Amino acid transporters KOG KOG1303
endomembrane system GO GO:0012505
positive gravitropism GO GO:0009958
auxin binding GO GO:0010011
root cap development GO GO:0048829
Golgi apparatus GO GO:0005794
lateral root formation GO GO:0010311
root hair cell differentiation GO GO:0048765
endosome GO GO:0005768
establishment of planar polarity GO GO:0001736
auxin polar transport GO GO:0009926
auxin influx transmembrane transporter activity GO GO:0010328
plasma membrane GO GO:0005886
response to nematode GO GO:0009624
cell surface GO GO:0009986
membrane GO GO:0016020
amino acid transmembrane transporter activity GO GO:0015171
amino acid transport GO GO:0006865
response to ethylene stimulus GO GO:0009723
response to auxin stimulus GO GO:0009733
transporter activity GO GO:0005215
auxin influx GO GO:0060919
Transmembrane amino acid transporter protein PFAM PF01490
AMINO ACID TRANSPORTER Panther PTHR22950
Amino acid transporters KOG KOG1303
Transmembrane amino acid transporter family protein AT AT2G38120

Glyma18g03290

Ribosomal protein L10 PFAM PF00466
60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER Panther PTHR21141
60S acidic ribosomal protein P0 KOG KOG0815
ribosome biogenesis PFAM PF00466
translational elongation PFAM PF00428
60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER Panther PTHR21141
60S acidic ribosomal protein P0 KOG KOG0815
Ribosomal protein L10 family protein AT AT3G09200

Glyma18g03300

60s Acidic ribosomal protein PFAM PF00428
60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER Panther PTHR21141
60S acidic ribosomal protein P0 KOG KOG0815
membrane GO GO:0016020
ribosome biogenesis GO GO:0042254
copper ion binding GO GO:0005507
response to zinc ion GO GO:0010043
response to cadmium ion GO GO:0046686
response to salt stress GO GO:0009651
cytosol GO GO:0005829
plasma membrane GO GO:0005886
chloroplast GO GO:0009507
nucleolus GO GO:0005730
cytosolic ribosome GO GO:0022626
nucleus GO GO:0005634
response to cold GO GO:0009409
translational elongation GO GO:0006414
ribosome GO GO:0005840
translation GO GO:0006412
structural constituent of ribosome GO GO:0003735
ribosome biogenesis PFAM PF00466
60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER Panther PTHR21141
60S acidic ribosomal protein P0 KOG KOG0815
Ribosomal protein L10 family protein AT AT3G09200

Glyma18g03310

Hs1pro-1 protein C-terminus PFAM PF07014
Hs1pro-1 N-terminus PFAM PF07231
Hs1pro-1 protein C-terminus PFAM PF07014
ortholog of sugar beet HS1 PRO-1 2 AT AT2G40000

Glyma18g03330

Major intrinsic protein PFAM PF00230
AQUAPORIN TRANSPORTER Panther PTHR19139
transport PFAM PF00230
transport Panther PTHR19139
plasma membrane intrinsic protein 1;5 AT AT4G23400

Glyma18g03340

Mov34/MPN/PAD-1 family PFAM PF01398
EIF3F-RELATED Panther PTHR10540
Translation initiation factor 3, subunit f (eIF-3f) KOG KOG2975
protein binding PFAM PF01398
EIF3F-RELATED Panther PTHR10540
Translation initiation factor 3, subunit f (eIF-3f) KOG KOG2975
translation initiation factor eIF-3 subunit 5 KO K03249
eukaryotic translation initiation factor 2 AT AT2G39990

Glyma18g03350

Homeobox domain PFAM PF00046
sequence-specific DNA binding PFAM PF00046
WUSCHEL related homeobox 5 AT AT3G11260

Glyma18g03360

Mov34/MPN/PAD-1 family PFAM PF01398
EIF3F-RELATED Panther PTHR10540
26S proteasome regulatory complex, subunit RPN8/PSMD7 KOG KOG1556
RPN8, PSMD7; 26S proteasome regulatory subunit N8 KO K03038
protein catabolic process GO GO:0030163
embryo development ending in seed dormancy GO GO:0009793
nucleus GO GO:0005634
proteasome complex GO GO:0000502
leaf morphogenesis GO GO:0009965
ubiquitin-dependent protein catabolic process GO GO:0006511
proteasome regulatory particle, lid subcomplex GO GO:0008541
molecular_function GO GO:0003674
protein binding PFAM PF01398
EIF3F-RELATED Panther PTHR10540
26S proteasome regulatory complex, subunit RPN8/PSMD7 KOG KOG1556
26S proteasome regulatory subunit N8 KO K03038
RP non-ATPase subunit 8A AT AT5G05780

Glyma18g03380

Transferase family PFAM PF02458
transferase activity, transferring acyl groups other than amino-acyl groups PFAM PF02458
HXXXD-type acyl-transferase family protein AT AT2G39980

Glyma18g03390

C2 domain PFAM PF00168
FAMILY NOT NAMED Panther PTHR22949
protein binding PFAM PF00168
WHITE COLLAR 2 PROTEIN (WC2) Panther PTHR22949
Calcium-dependent lipid-binding (CaLB domain) family protein AT AT1G07310

Glyma18g03400

Mitochondrial carrier protein PFAM PF00153
MITOCHONDRIAL CARRIER PROTEIN RELATED Panther PTHR11896
Predicted mitochondrial carrier protein KOG KOG0769
Mitochondrial carrier protein PFAM PF00153
MITOCHONDRIAL CARRIER PROTEIN RELATED Panther PTHR11896
Predicted mitochondrial carrier protein KOG KOG0769
solute carrier family 25 member 17 KO K13354
Mitochondrial substrate carrier family protein AT AT2G39970

Glyma18g03420

F-BOX/LEUCINE RICH REPEAT PROTEIN Panther PTHR23125
Leucine rich repeat proteins, some proteins contain F-box KOG KOG1947
F-BOX/LEUCINE RICH REPEAT PROTEIN Panther PTHR23125
Leucine rich repeat proteins, some proteins contain F-box KOG KOG1947
coronatine-insensitive protein 1 KO K13463
RNI-like superfamily protein AT AT2G39940

Glyma18g03430

Myb-like DNA-binding domain PFAM PF00249
TRANSCRIPTIONAL ADAPTOR 2 (ADA2)-RELATED Panther PTHR12374
Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains KOG KOG0724
Myb-like DNA-binding domain PFAM PF00249
TRANSCRIPTIONAL ADAPTOR 2 (ADA2)-RELATED Panther PTHR12374
Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains KOG KOG0724
Duplicated homeodomain-like superfamily protein AT AT3G11280

Glyma18g03440

Fructose-1-6-bisphosphatase PFAM PF00316
FRUCTOSE-1,6-BISPHOSPHATASE-RELATED Panther PTHR11556
Fructose-1,6-bisphosphatase KOG KOG1458
Sedoheptulose-bisphosphatase. EC 3.1.3.37
E3.1.3.37; sedoheptulose-bisphosphatase [EC:3.1.3.37 ] [GO:0050278 ] KO K01100
reductive pentose-phosphate cycle GO GO:0019253
defense response to bacterium GO GO:0042742
apoplast GO GO:0048046
chloroplast stroma GO GO:0009570
thylakoid GO GO:0009579
sedoheptulose-bisphosphatase activity GO GO:0050278
carbohydrate biosynthetic process GO GO:0016051
starch biosynthetic process GO GO:0019252
chloroplast GO GO:0009507
sucrose biosynthetic process GO GO:0005986
phosphoric ester hydrolase activity GO GO:0042578
chloroplast envelope GO GO:0009941
protein binding GO GO:0005515
carbohydrate metabolic process GO GO:0005975
Activity=sedoheptulose-bisphosphatase; Pathway=Calvin-Benson-Bassham cycle SoyCyc CALVIN-PWY
Activity=sedoheptulose-bisphosphatase; Pathway=oxygenic photosynthesis SoyCyc PHOTOALL-PWY
Activity=sedoheptulose-bisphosphatase; Pathway=Calvin-Benson-Bassham cycle SoyCyc CALVIN-PWY
phosphoric ester hydrolase activity PFAM PF00316
phosphoric ester hydrolase activity Panther PTHR11556
Fructose-1,6-bisphosphatase KOG KOG1458
sedoheptulose-bisphosphatase EC 3.1.3.37
sedoheptulose-bisphosphatase [EC:3.1.3.37] KO K01100
sedoheptulose-bisphosphatase AT AT3G55800

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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