Genes Covered By A Chromosome Alteration FN300080.01.01.M4.2

Gene Name

Gene Annotation

Glyma06g23530

Transferase family PFAM PF02458
transferase activity, transferring acyl groups other than amino-acyl groups PFAM PF02458
HXXXD-type acyl-transferase family protein AT AT1G03390

Glyma06g23560

Acyl-ACP thioesterase PFAM PF01643
Thiolester hydrolases. EC 3.1.2.-
fatty acyl-ACP thioesterase B [EC:3.1.2.14 3.1.2.-] KO K10781
Oleoyl-[acyl-carrier protein] hydrolase. EC 3.1.2.14
Activity=oleoyl-[acyl-carrier-protein] hydrolase; Pathway=acyl-ACP thioesterase pathway SoyCyc PWY-5142
Activity=oleoyl-[acyl-carrier-protein] hydrolase; Pathway=superpathway of fatty acid biosynthesis II (plant) SoyCyc PWY-5156
Activity=oleoyl-[acyl-carrier-protein] hydrolase; Pathway=oleate biosynthesis I (plants) SoyCyc PWY-5147
Activity=oleoyl-[acyl-carrier-protein] hydrolase; Pathway=palmitate biosynthesis II (bacteria and plants) SoyCyc PWY-5971
Activity=oleoyl-[acyl-carrier-protein] hydrolase; Pathway=palmitoleate biosynthesis II SoyCyc PWY-5366
Activity=oleoyl-[acyl-carrier-protein] hydrolase; Pathway=stearate biosynthesis II (plants) SoyCyc PWY-5989
Activity=oleoyl-[acyl-carrier-protein] hydrolase; Pathway=palmitoleate biosynthesis SoyCyc PWY-5366
Activity=oleoyl-[acyl-carrier-protein] hydrolase; Pathway=oleate biosynthesis I plants SoyCyc PWY-5147
Activity=oleoyl-[acyl-carrier-protein] hydrolase; Pathway=stearate biosynthesis II plants SoyCyc PWY-5989
Activity=oleoyl-[acyl-carrier-protein] hydrolase; Pathway=acyl-ACP thioesterase pathway SoyCyc PWY-5142
Activity=oleoyl-[acyl-carrier-protein] hydrolase; Pathway=palmitate biosynthesis II bacteria and plants SoyCyc PWY-5971
Activity=oleoyl-[acyl-carrier-protein] hydrolase; Pathway=cis-vaccenate biosynthesis SoyCyc PWY-5973
Activity=oleoyl-[acyl-carrier-protein] hydrolase; Pathway=petroselinate biosynthesis SoyCyc PWY-5367
Activity=oleoyl-[acyl-carrier-protein] hydrolase; Pathway=superpathway of fatty acid biosynthesis II plant SoyCyc PWY-5156
thiolester hydrolase activity PFAM PF12590
fatty acid biosynthetic process PFAM PF01643
Thiolester hydrolases. EC 3.1.2.-
oleoyl-[acyl-carrier-protein] hydrolase EC 3.1.2.14
fatty acyl-ACP thioesterase B [EC:3.1.2.14 3.1.2.-] KO K10781
fatty acyl-ACP thioesterases B AT AT1G08510

Glyma06g23570

Snf7 PFAM PF03357
SNF7-RELATED Panther PTHR10476
Vacuolar sorting protein VPS24 KOG KOG3229
ESCRT III complex GO GO:0000815
vesicle-mediated transport GO GO:0016192
protein transport PFAM PF03357
SNF7-RELATED Panther PTHR10476
Vacuolar sorting protein VPS24 KOG KOG3229
charged multivesicular body protein 3 KO K12193
SNF7 family protein AT AT5G22950

Glyma06g23580

Domain of unknown function (DUF1767) PFAM PF08585
FAMILY NOT NAMED Panther PTHR13681
Domain of unknown function (DUF1767) PFAM PF08585
FAMILY NOT NAMED Panther PTHR13681
Domain of unknown function (DUF1767) AT AT5G19950

Glyma06g23590

Protein kinase domain PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine rich repeat N-terminal domain PFAM PF08263
protein binding PFAM PF00560
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine-rich repeat protein kinase family protein AT AT2G26730

Glyma06g23620

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT5G55740

Glyma06g23630

Protein of unknown function (DUF2921) PFAM PF11145
Protein of unknown function (DUF2921) AT AT1G52780

Glyma06g23730

ataxia-telangiectasia mutated AT AT3G48190

Glyma06g23830

GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE Panther PTHR11699:SF49
oxidoreductase activity PFAM PF00171
GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE Panther PTHR11699:SF49
auxin response factor 4 AT AT5G60450

Glyma06g23848

Ras family PFAM PF00071
RAB15, 13, 10, 1, 35, 5, AND 8 Panther PTHR11708:SF225
RAB GTPase homolog 8 AT AT3G53610

Glyma06g23866

MORN repeat PFAM PF02493
PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED Panther PTHR23084
Histone H3 K4-specific methyltransferase SET7/9 family protein AT AT4G17080

Glyma06g23884

nucleic acid binding PFAM PF01096
DNA-DIRECTED RNA POLYMERASE Panther PTHR11239
TFIIB zinc-binding protein AT AT3G25940

Glyma06g23902

Myb-like DNA-binding domain PFAM PF00249
Homeodomain-like superfamily protein AT AT2G03500

Glyma06g23920

Piwi domain PFAM PF02171
EUKARYOTIC TRANSLATION INITIATION FACTOR 2C Panther PTHR22891
Translation initiation factor 2C (eIF-2C) and related proteins KOG KOG1041
Domain of unknown function (DUF1785) PFAM PF08699
protein binding PFAM PF02170
protein binding PFAM PF02171
EUKARYOTIC TRANSLATION INITIATION FACTOR 2C Panther PTHR22891
Translation initiation factor 2C (eIF-2C) and related proteins KOG KOG1041
Stabilizer of iron transporter SufD / Polynucleotidyl transferase AT AT5G43810

Glyma06g23931

nucleic acid binding PFAM PF00098

Glyma06g23940

GRAS family transcription factor PFAM PF03514
Transcriptional regulator DELLA protein N terminal PFAM PF12041
GRAS family transcription factor PFAM PF03514
GRAS family transcription factor family protein AT AT2G01570

Glyma06g23950

F-box domain PFAM PF00646
AT AT5G19970

Glyma06g23990

WRKY DNA -binding domain PFAM PF03106
sequence-specific DNA binding PFAM PF03106
WRKY DNA-binding protein 40 AT AT1G80840

Glyma06g24020

pleiotropic drug resistance 12 AT AT1G15520

Glyma06g24030

Transducin/WD40 repeat-like superfamily protein AT AT5G17370

Glyma06g24046

PRA1 family protein PFAM PF03208
PRENYLATED RAB ACCEPTOR 1-RELATED Panther PTHR19317
prenylated RAB acceptor 1.B4 AT AT2G38360

Glyma06g24063

actin binding PFAM PF01115
actin binding Panther PTHR10619
Subunits of heterodimeric actin filament capping protein Capz superfamily AT AT1G71790

Glyma06g24080

TRANSLATIONAL ACTIVATOR GCN1-RELATED Panther PTHR23346:SF7
TRANSLATIONAL ACTIVATOR GCN1-RELATED Panther PTHR23346:SF7
ILITYHIA AT AT1G64790

Glyma06g24105

ataxia-telangiectasia mutated AT AT3G48190

Glyma06g24130

2OG-Fe(II) oxygenase superfamily PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
oxidoreductase activity PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein AT AT1G12010

Glyma06g24151

Protein of unknown function (DUF 659) PFAM PF04937
hAT dimerisation domain-containing protein / transposase-related AT AT5G33406

Glyma06g24170

VESICLE DOCKING PROTEIN P115 Panther PTHR10013
VESICLE DOCKING PROTEIN P115 Panther PTHR10013
golgin candidate 6 AT AT3G27530

Protein of unknown function (DUF861) PFAM PF05899
PFAM PF06249
RmlC-like cupins superfamily protein AT AT4G10300

Glyma06g24441

Protein of unknown function (DUF803) PFAM PF05653
membrane PFAM PF00892
UNCHARACTERIZED Panther PTHR12570
Protein of unknown function (DUF803) AT AT1G71900

Glyma06g24450

FAMILY NOT NAMED Panther PTHR23114
hydrolase activity PFAM PF00293
FAMILY NOT NAMED Panther PTHR23114
decapping 2 AT AT5G13570

Glyma06g24470

SOUL heme-binding protein PFAM PF04832
HEME-BINDING PROTEIN-RELATED Panther PTHR11220
Uncharacterized conserved protein (DUF2358) PFAM PF10184
SOUL heme-binding protein PFAM PF04832
HEME-BINDING PROTEIN-RELATED Panther PTHR11220
SOUL heme-binding family protein AT AT5G20140

Glyma06g24480

Chalcone and stilbene synthases, C-terminal domain PFAM PF02797
response to light stimulus GO GO:0009416
response to cold GO GO:0009409
membrane GO GO:0016020
transferase activity, transferring acyl groups other than amino-acyl groups GO GO:0016747
catalytic activity GO GO:0003824
Activity=fatty acid elongase; Pathway=sciadonic acid biosynthesis SoyCyc PWY-6598
Activity=fatty acid elongase; Pathway=wax esters biosynthesis I SoyCyc PWY-5884
fatty acid biosynthetic process PFAM PF08392
acyltransferase activity PFAM PF00195
lipid biosynthetic process PFAM PF08541
Chalcone and stilbene synthases, C-terminal domain PFAM PF02797
3-ketoacyl-CoA synthase 11 AT AT2G26640

Glyma06g24500

Histone-like transcription factor (CBF/NF-Y) and archaeal histone PFAM PF00808
HISTONE H2A Panther PTHR23430
Histone 2A KOG KOG1757
nucleolus GO GO:0005730
flower development GO GO:0009908
nucleus GO GO:0005634
detection of temperature stimulus GO GO:0016048
nucleosome GO GO:0000786
defense response to bacterium GO GO:0042742
regulation of flower development GO GO:0009909
vacuole GO GO:0005773
DNA binding GO GO:0003677
protein binding GO GO:0005515
DNA binding PFAM PF00125
HISTONE H2A Panther PTHR23430
Histone 2A KOG KOG1757
histone H2A KO K11251
histone H2A protein 9 AT AT1G52740

Glyma06g24511

Leucine rich repeat N-terminal domain PFAM PF08263
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Leucine-rich repeat protein kinase family protein AT AT5G07150

Glyma06g24520

Endoplasmic reticulum protein ERp29, C-terminal domain PFAM PF07749
PROTEIN DISULFIDE ISOMERASE Panther PTHR18929
Thioredoxin/protein disulfide isomerase KOG KOG0191
cell redox homeostasis PFAM PF00085
endoplasmic reticulum PFAM PF07749
PROTEIN DISULFIDE ISOMERASE Panther PTHR18929
Thioredoxin-like protein KOG KOG0910
thioredoxin family protein AT AT2G47470

Glyma06g24540

Cytochrome P450 PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP4/CYP19/CYP26 subfamilies KOG KOG0157
Activity=steroid hydroxylase; Pathway=camptothecin biosynthesis SoyCyc PWY-6326
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP4/CYP19/CYP26 subfamilies KOG KOG0157
Cytochrome P450 superfamily protein AT AT2G26710

Glyma06g24555

Myosin heavy chain-related protein AT AT1G22260

Glyma06g24570

AT AT1G78810

Glyma06g24600

Methyltransferase domain PFAM PF08242
PROTEIN ARGININE N-METHYLTRANSFERASE Panther PTHR11006
Protein arginine N-methyltransferase PRMT1 and related enzymes KOG KOG1499
lipid biosynthetic process PFAM PF02353
protein methyltransferase activity PFAM PF06325
methyltransferase activity PFAM PF05175
methyltransferase activity PFAM PF05185
methyltransferase activity PFAM PF08241
PROTEIN ARGININE N-METHYLTRANSFERASE Panther PTHR11006
Protein arginine N-methyltransferase PRMT1 and related enzymes KOG KOG1499
protein arginine methyltransferase 10 AT AT1G04870

Glyma06g24610

Zinc knuckle PFAM PF00098
MULE transposase domain PFAM PF10551
FRS (FAR1 Related Sequences) transcription factor family AT AT4G15090

Glyma06g24620

Protein kinase domain PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Protein tyrosine kinase PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Protein kinase superfamily protein AT AT5G20050

Glyma06g24640

Phospholipase/Carboxylesterase PFAM PF02230
LYSOPHOSPHOLIPASE-RELATED Panther PTHR10655
Lysophospholipase KOG KOG2112
hydrolase activity PFAM PF02230
Serine hydrolase (FSH1) PFAM PF03959
LYSOPHOSPHOLIPASE-RELATED Panther PTHR10655
Lysophospholipase KOG KOG2112
alpha/beta-Hydrolases superfamily protein AT AT5G20060

Glyma06g24655

nucleic acid binding PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
ortholog of human splicing factor SC35 AT AT5G64200

Glyma06g24671

hydrolase activity PFAM PF02230
LYSOPHOSPHOLIPASE-RELATED Panther PTHR10655
alpha/beta-Hydrolases superfamily protein AT AT5G20060

Glyma06g24685

Panther PTHR10178:SF21

Glyma06g24701

PPPDE putative peptidase domain PFAM PF05903
UNCHARACTERIZED Panther PTHR12378
PPPDE putative thiol peptidase family protein AT AT4G17486

Glyma06g24715

PIF1 helicase PFAM PF05970
HELICASE-RELATED Panther PTHR10492
DNA helicase PIF1/RRM3 KOG KOG0987
PIF1 helicase AT AT3G51690

Glyma06g24730

Myb-like DNA-binding domain PFAM PF00249
TELOMERIC REPEAT BINDING PROTEIN Panther PTHR21717:SF5
Myb-like DNA-binding domain PFAM PF00249
gb def: Telomeric repeat binding factor 1 Panther PTHR21717:SF4
myb-like HTH transcriptional regulator family protein AT AT5G58340

Glyma06g24760

Early nodulin 93 ENOD93 protein PFAM PF03386
Early nodulin 93 ENOD93 protein PFAM PF03386
early nodulin-related AT AT5G25940

Glyma06g24770

Zn-finger in Ran binding protein and others PFAM PF00641
FAMILY NOT NAMED Panther PTHR23111
intracellular PFAM PF00641
ZINC FINGER PROTEIN Panther PTHR23111
Ran BP2/NZF zinc finger-like superfamily protein AT AT2G26695

Glyma06g24780

NUDIX domain PFAM PF00293
MUTT/NUDIX HYDROLASE Panther PTHR22769
NADH pyrophosphatase I of the Nudix family of hydrolases KOG KOG3084
hydrolase activity PFAM PF09296
metal ion binding PFAM PF09297
hydrolase activity PFAM PF00293
MUTT/NUDIX HYDROLASE Panther PTHR22769
NADH pyrophosphatase I of the Nudix family of hydrolases KOG KOG3084
NAD+ diphosphatase EC 3.6.1.22
NAD+ diphosphatase [EC:3.6.1.22] KO K03426
nudix hydrolase homolog 19 AT AT5G20070

Glyma06g24820

Choline/ethanolamine kinase PFAM PF01633
CHOLINE/ETHANOALAMINE KINASE RELATED Panther PTHR22603
Ethanolamine kinase KOG KOG4720
phosphotransferase activity, alcohol group as acceptor PFAM PF01633
Phosphotransferase enzyme family PFAM PF01636
CHOLINE/ETHANOALAMINE KINASE RELATED Panther PTHR22603
Ethanolamine kinase KOG KOG4720
Protein kinase superfamily protein AT AT2G26830

Glyma06g24830

Domain of unknown function (DUF1977) PFAM PF09320
DNAJ/HSP40 Panther PTHR11821
heat shock protein binding PFAM PF00226
Domain of unknown function (DUF1977) PFAM PF09320
DNAJ/HSP40 Panther PTHR11821
Molecular chaperone (DnaJ superfamily) KOG KOG0714
Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977) AT AT3G57340

Glyma06g24870

Peptidase C13 family PFAM PF01650
HEMOGLOBINASE FAMILY MEMBER Panther PTHR12000
Gpi-anchor transamidase KOG KOG1349
cysteine-type endopeptidase activity PFAM PF01650
cysteine-type endopeptidase activity Panther PTHR12000
Gpi-anchor transamidase KOG KOG1349
Peptidase C13 family AT AT1G08750

Glyma06g24950

Plant protein of unknown function (DUF869) PFAM PF05911
Plant protein of unknown function (DUF869) AT AT2G23360

Glyma06g25030

DNA-directed RNA polymerase activity PFAM PF00940
DNA-directed RNA polymerase activity Panther PTHR10102
Mitochondrial/chloroplast DNA-directed RNA polymerase RPO41, provides primers for DNA replication-initiation KOG KOG1038
DNA-directed RNA polymerase EC 2.7.7.6
DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6] KO K10908
DNA/RNA polymerases superfamily protein AT AT2G24120

Glyma06g25110

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine rich repeat N-terminal domain PFAM PF08263
protein binding PFAM PF00560
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine-rich receptor-like protein kinase family protein AT AT2G24130

Glyma06g25310

Methyl-CpG binding domain PFAM PF01429
nucleus PFAM PF01429
methyl-CPG-binding domain 10 AT AT1G15340

Glyma06g25331

nucleoporin-related AT AT5G20200

Glyma06g25350

nucleoporin-related AT AT5G20200

Glyma06g25380

nucleoporin-related AT AT5G20200

Glyma06g25390

NB-ARC domain-containing disease resistance protein AT AT1G50180

Glyma06g25480

Gamma interferon inducible lysosomal thiol reductase (GILT) PFAM PF03227
GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE (GILT)-RELATED Panther PTHR13234
Gamma-interferon inducible lysosomal thiol reductase KOG KOG3160
Thioredoxin superfamily protein AT AT1G07080

Glyma06g25570

Putative serine esterase (DUF676) PFAM PF05057
UNCHARACTERIZED Panther PTHR12482
Predicted alpha/beta hydrolase KOG KOG4372
alpha/beta-Hydrolases superfamily protein AT AT4G25770

Glyma06g25660

CARBAMOYLTRANSFERASE RELATED Panther PTHR11405
carbamoyl-phosphate synthase activity PFAM PF00988
CARBAMOYLTRANSFERASE RELATED Panther PTHR11405
carbamoyl phosphate synthetase A AT AT3G27740

Glyma06g25670

CENTAURIN/ARF Panther PTHR23180
CENTAURIN/ARF Panther PTHR23180
Calcium-dependent ARF-type GTPase activating protein family AT AT4G21160

Glyma06g25880

Inositol monophosphatase family PFAM PF00459
INOSITOL MONOPHOSPHATASE Panther PTHR20854
Inositol monophosphatase KOG KOG2951
inositol or phosphatidylinositol phosphatase activity PFAM PF00459
inositol or phosphatidylinositol phosphatase activity Panther PTHR20854
Inositol monophosphatase KOG KOG2951
inositol-phosphate phosphatase EC 3.1.3.25
myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] KO K01092
myo-inositol monophosphatase like 1 AT AT1G31190

Glyma06g25890

Glyma06g25900

SOLUTE CARRIER FAMILY 35 Panther PTHR11132
Nucleotide-sugar transporter VRG4/SQV-7 KOG KOG1444
Triose-phosphate Transporter family PFAM PF03151
SOLUTE CARRIER FAMILY 35 Panther PTHR11132
Nucleotide-sugar transporter VRG4/SQV-7 KOG KOG1444
Nucleotide/sugar transporter family protein AT AT4G32272

Glyma06g26017

Glyma06g26134

Glyma06g26252

PDI-like 1-2 AT AT1G77510

Glyma06g26370

phloem protein 2-A9 AT AT1G31200

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain