Genes Covered By A Chromosome Alteration FN300078.01.01.M4.4

Gene Name

Gene Annotation

Glyma16g01960

Inorganic pyrophosphatase PFAM PF00719
INORGANIC PYROPHOSPHATASE Panther PTHR10286
phosphate metabolic process PFAM PF00719
phosphate metabolic process Panther PTHR10286
pyrophosphorylase 1 AT AT1G01050

Glyma16g01970

Protein tyrosine kinase PFAM PF07714
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED Panther PTHR22982
Serine/threonine-protein kinase involved in autophagy KOG KOG0595
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED Panther PTHR22982
Serine/threonine protein kinase KOG KOG0583
Protein kinase superfamily protein AT AT3G61960

Glyma16g01980

Myb-like DNA-binding domain PFAM PF00249
Myb-like DNA-binding domain PFAM PF00249
LATE ELONGATED HYPOCOTYL KO K12133
Homeodomain-like superfamily protein AT AT1G01060

Glyma16g01990

2OG-Fe(II) oxygenase superfamily PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
oxidoreductase activity PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein AT AT4G10490

Glyma16g02010

photosystem I P subunit AT AT2G46820

Glyma16g02020

Helix-loop-helix DNA-binding domain PFAM PF00010
transcription regulator activity PFAM PF00010
basic helix-loop-helix (bHLH) DNA-binding superfamily protein AT AT3G61950

Glyma16g02030

Cation efflux family PFAM PF01545
CATION EFFLUX PROTEIN/ ZINC TRANSPORTER Panther PTHR11562
Zn2+ transporter KOG KOG1482
cation transmembrane transporter activity PFAM PF01545
cation transmembrane transporter activity Panther PTHR11562
Zn2+ transporter KOG KOG1482
metal tolerance protein A2 AT AT3G58810

Glyma16g02040

Harpin-induced protein 1 (Hin1) PFAM PF07320
Late embryogenesis abundant protein PFAM PF03168
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family AT AT4G01410

Glyma16g02050

CCT motif PFAM PF06203
SENSOR HISTIDINE KINASE-RELATED Panther PTHR23283
two-component response regulator activity PFAM PF00072
protein binding PFAM PF06203
SENSOR HISTIDINE KINASE-RELATED Panther PTHR23283
pseudo-response regulator 5 AT AT5G24470

Glyma16g02070

Surfeit locus protein 2 (SURF2) PFAM PF05477
Surfeit locus protein 2 (SURF2) PFAM PF05477
Surfeit locus protein 2 (SURF2) AT AT5G40570

Glyma16g02080

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
Predicted RNA-binding protein (RRM superfamily) KOG KOG0114
nucleic acid binding PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
Predicted RNA-binding protein (RRM superfamily) KOG KOG0114
RNA-binding (RRM/RBD/RNP motifs) family protein AT AT1G01080

Glyma16g02090

Dehydrogenase E1 component PFAM PF00676
PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT (BACTERIAL AND ORGANELLAR) Panther PTHR11516
Pyruvate dehydrogenase E1, alpha subunit KOG KOG0225
Pyruvate dehydrogenase (lipoamide). EC 1.2.4.1
E1.2.4.1A, pdhA; pyruvate dehydrogenase E1 component, alpha subunit [EC:1.2.4.1 ] [COG:COG1071 ] [GO:0004739 ] KO K00161
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor PFAM PF00676
catalytic activity PFAM PF02775
Transketolase, thiamine diphosphate binding domain PFAM PF00456
PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT (BACTERIAL AND ORGANELLAR) Panther PTHR11516
Pyruvate dehydrogenase E1, alpha subunit KOG KOG0225
pyruvate dehydrogenase (acetyl-transferring) EC 1.2.4.1
pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] KO K00161
pyruvate dehydrogenase E1 alpha AT AT1G01090

Glyma16g02100

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
WD REPEAT DOMAIN-CONTAINING FAMILY Panther PTHR15574
Nucleolar GTPase/ATPase p130 KOG KOG2992
Region in Clathrin and VPS PFAM PF00637
VACUOLAR PROTEIN SORTING VPS41 Panther PTHR12616
Nucleolar GTPase/ATPase p130 KOG KOG2992
transducin family protein / WD-40 repeat family protein AT AT4G00800

Glyma16g02110

Glycosyl transferases group 1 PFAM PF00534
GLYCOSYLTRANSFERASE Panther PTHR12526
Glycogen (starch) synthase. EC 2.4.1.11
E2.4.1.11, GYS; glycogen(starch) synthase [EC:2.4.1.11 ] [COG:COG0297 ] [GO:0004373 ] [CAZy:GT3 GT5 ] KO K00693
Activity=NDP-glucose-starch glucosyltransferase; Pathway=starch biosynthesis SoyCyc PWY-622
Starch synthase catalytic domain PFAM PF08323
biosynthetic process PFAM PF00534
GLYCOSYLTRANSFERASE Panther PTHR12526
UDP-Glycosyltransferase superfamily protein AT AT1G32900

Glyma16g02121

nucleic acid binding PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
Predicted RNA-binding protein SEB4 (RRM superfamily) KOG KOG0149
RNA-binding (RRM/RBD/RNP motifs) family protein AT AT2G46780

Glyma16g02131

WD domain, G-beta repeat PFAM PF00400
FAMILY NOT NAMED Panther PTHR19862
Transducin/WD40 repeat-like superfamily protein AT AT3G05090

Glyma16g02140

AT AT3G61920

Glyma16g02150

PA domain PFAM PF02225
SUBTILISIN/KEXIN-RELATED SERINE PROTEASE Panther PTHR10795
identical protein binding PFAM PF05922
serine-type endopeptidase activity PFAM PF00082
SUBTILISIN/KEXIN-RELATED SERINE PROTEASE Panther PTHR10795
Subtilisin-like serine endopeptidase family protein AT AT5G67090

Glyma16g02160

PA domain PFAM PF02225
SUBTILISIN/KEXIN-RELATED SERINE PROTEASE Panther PTHR10795
identical protein binding PFAM PF05922
serine-type endopeptidase activity PFAM PF00082
SUBTILISIN/KEXIN-RELATED SERINE PROTEASE Panther PTHR10795
Subtilisin-like serine endopeptidase family protein AT AT5G67090

Glyma16g02171

SUBTILISIN/KEXIN-RELATED SERINE PROTEASE Panther PTHR10795
Subtilisin-like serine endopeptidase family protein AT AT5G67090

Glyma16g02180

S1/P1 Nuclease PFAM PF02265
DNA catabolic process PFAM PF02265
endonuclease 2 AT AT1G68290

Glyma16g02190

Peptidase inhibitor I9 PFAM PF05922
SUBTILISIN/KEXIN-RELATED SERINE PROTEASE Panther PTHR10795
identical protein binding PFAM PF05922
serine-type endopeptidase activity PFAM PF00082
SUBTILISIN/KEXIN-RELATED SERINE PROTEASE Panther PTHR10795
Subtilisin-like serine endopeptidase family protein AT AT5G67090

Glyma16g02200

No apical meristem (NAM) protein PFAM PF02365
regulation of transcription, DNA-dependent PFAM PF02365
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein AT AT2G46770

Glyma16g02215

nucleic acid binding PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
Predicted RNA-binding protein SEB4 (RRM superfamily) KOG KOG0149
RNA-binding (RRM/RBD/RNP motifs) family protein AT AT2G46780

Glyma16g02230

Glyma16g02240

IQ calmodulin-binding motif PFAM PF00612
protein binding PFAM PF00612
IQ-domain 17 AT AT4G00820

Glyma16g02250

FAD binding domain PFAM PF01565
D-LACTATE DEHYDROGENASE Panther PTHR11748
D-arabinono-1, 4-lactone oxidase KOG KOG4730
flavin adenine dinucleotide binding PFAM PF01565
D-arabinono-1,4-lactone oxidase activity PFAM PF04030
D-LACTATE DEHYDROGENASE Panther PTHR11748
D-arabinono-1, 4-lactone oxidase KOG KOG4730
D-arabinono-1,4-lactone oxidase family protein AT AT2G46760

Glyma16g02270

FAD binding domain PFAM PF01565
D-LACTATE DEHYDROGENASE Panther PTHR11748
D-arabinono-1, 4-lactone oxidase KOG KOG4730
flavin adenine dinucleotide binding PFAM PF01565
D-arabinono-1,4-lactone oxidase activity PFAM PF04030
D-LACTATE DEHYDROGENASE Panther PTHR11748
D-arabinono-1, 4-lactone oxidase KOG KOG4730
D-arabinono-1,4-lactone oxidase family protein AT AT2G46760

Glyma16g02280

FAD binding domain PFAM PF01565
GULONOLACTONE OXIDASE Panther PTHR13878
D-arabinono-1, 4-lactone oxidase KOG KOG4730
flavin adenine dinucleotide binding PFAM PF01565
D-arabinono-1,4-lactone oxidase activity PFAM PF04030
GULONOLACTONE OXIDASE Panther PTHR13878
D-arabinono-1, 4-lactone oxidase KOG KOG4730
D-arabinono-1,4-lactone oxidase family protein AT AT2G46760

Glyma16g02290

NAF domain PFAM PF03822
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED Panther PTHR22982
Serine/threonine protein kinase KOG KOG0583
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
signal transduction PFAM PF03822
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED Panther PTHR22982
Serine/threonine protein kinase KOG KOG0583
CBL-interacting protein kinase 9 AT AT1G01140

Glyma16g02300

Glyma16g02310

SSXT protein (N-terminal region) PFAM PF05030
SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN Panther PTHR23107
Calcium-responsive transcription coactivator KOG KOG3227
SSXT protein (N-terminal region) PFAM PF05030
SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN Panther PTHR23107
Calcium-responsive transcription coactivator KOG KOG3227
GRF1-interacting factor 3 AT AT4G00850

Glyma16g02320

Helix-loop-helix DNA-binding domain PFAM PF00010
MYC Panther PTHR11514
transcription regulator activity PFAM PF00010
MYC Panther PTHR11514
Basic helix-loop-helix (bHLH) DNA-binding family protein AT AT1G32640

Glyma16g02340

Protein kinase domain PFAM PF00069
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED Panther PTHR22982
Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily KOG KOG0032
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
PFAM PF06293
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED Panther PTHR22982
Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily KOG KOG0032
CDPK-related kinase 3 AT AT2G46700

Glyma16g02350

Auxin responsive protein PFAM PF02519
Auxin responsive protein PFAM PF02519
SAUR family protein KO K14488
SAUR-like auxin-responsive protein family AT AT2G46690

Glyma16g02370

Auxin responsive protein PFAM PF02519
Auxin responsive protein PFAM PF02519
SAUR-like auxin-responsive protein family AT AT2G46690

Glyma16g02381

Glyma16g02390

Homeobox associated leucine zipper PFAM PF02183
HOMEOBOX PROTEIN Panther PTHR19418
homeobox-leucine zipper protein KO K09338
sequence-specific DNA binding PFAM PF00046
nucleus PFAM PF02183
HOMEOBOX PROTEIN Panther PTHR19418
homeobox-leucine zipper protein KO K09338
homeobox 7 AT AT2G46680

Glyma16g02400

Cytochrome P450 PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156
Acting on paired donors, with incorporation or reduction of EC 1.14.-.-
beta-carotene 15,15'-monooxygenase [EC:1.14.99.36] KO K00517
cytochrome P450, family 78, subfamily A, polypeptide 6 AT AT2G46660

Glyma16g02410

Cytochrome b5-like Heme/Steroid binding domain PFAM PF00173
CYTOCHROME B5 Panther PTHR19359
Cytochrome b5 KOG KOG0537
heme binding PFAM PF00173
CYTOCHROME B5 Panther PTHR19359
Cytochrome b5 KOG KOG0537
cytochrome B5 isoform E AT AT5G53560

Glyma16g02420

AT AT2G46640

Glyma16g02430

AT AT1G63310

Glyma16g02440

AT AT3G61870

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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