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Integrating Genetics and Genomics to Advance Soybean Research

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Genes Covered By A Chromosome Alteration FN300042.01.01.M4.5

Gene NameGene Annotation
Glyma20g05950
Glyma20g06075
  • inter-alpha-trypsin inhibitor heavy chain-relatedATAT1G19110
Glyma20g06200
  • Clathrin adaptor complex small chainPFAMPF01217
  • CLATHRIN COAT ASSEMBLY PROTEINPantherPTHR11753
  • Clathrin adaptor complex, small subunitKOGKOG0934
  • clathrin coat of trans-Golgi network vesicleGOGO:0030130
  • clathrin adaptor complexGOGO:0030131
  • membrane coatGOGO:0030117
  • clathrin vesicle coatGOGO:0030125
  • vesicle-mediated transportGOGO:0016192
  • protein transportGOGO:0015031
  • transportGOGO:0006810
  • intracellular protein transportGOGO:0006886
  • protein transporter activityGOGO:0008565
  • Clathrin adaptor complex small chainPFAMPF01217
  • protein transporter activityPantherPTHR11753
  • Clathrin adaptor complex, small subunitKOGKOG0934
  • Clathrin adaptor complex small chain family proteinATAT4G35410
Glyma20g06210
  • ZIP Zinc transporterPFAMPF02535
  • ZINC-IRON TRANSPORTERPantherPTHR11040
  • Fe2+/Zn2+ regulated transporterKOGKOG1558
  • metal ion transportPFAMPF02535
  • ZINC-IRON TRANSPORTERPantherPTHR11040
  • Fe2+/Zn2+ regulated transporterKOGKOG1558
  • zinc transporter 1 precursorATAT3G12750
Glyma20g06223
Glyma20g06236
Glyma20g06250
Glyma20g06271
  • KATANIN P80 SUBUNITPantherPTHR19845
  • Transducin/WD40 repeat-like superfamily proteinATAT1G11160
Glyma20g06290
  • Protease inhibitor/seed storage/LTP familyPFAMPF00234
  • Protease inhibitor/seed storage/LTP familyPFAMPF00234
  • Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily proteinATAT3G22142
Glyma20g06540
  • Leucine Rich RepeatPFAMPF00560
  • SERINE-THREONINE PROTEIN KINASE, PLANT-TYPEPantherPTHR23258
  • Leucine rich repeat N-terminal domainPFAMPF08263
  • protein bindingPFAMPF00560
  • SERINE-THREONINE PROTEIN KINASE, PLANT-TYPEPantherPTHR23258
  • Leucine-rich repeat (LRR) family proteinATAT3G17640
Glyma20g06571
  • nucleobase, nucleoside, nucleotide and nucleic acid metabolic processPFAMPF01612
  • 3\'-5\' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing proteinATAT2G25910
Glyma20g06600
  • nodulin MtN21 /EamA-like transporter family proteinATAT5G07050
Glyma20g06615
Glyma20g06631
Glyma20g06645
  • TRANSCRIPTIONAL ADAPTOR 2 (ADA2)-RELATEDPantherPTHR12374
  • homolog of yeast ADA2 2AATAT3G07740
Glyma20g06660
Glyma20g06670
Glyma20g06680
  • NUDIX domainPFAMPF00293
  • NUDIX HYDROLASE RELATEDPantherPTHR13994
  • Predicted NUDIX hydrolase FGF-2 and related proteinsKOGKOG0648
  • hydrolase activityPFAMPF00293
  • NUDIX HYDROLASE RELATEDPantherPTHR13994
  • Predicted NUDIX hydrolase FGF-2 and related proteinsKOGKOG0648
  • nudix hydrolase homolog 2ATAT5G47650
Glyma20g06700
Glyma20g06725
Glyma20g06750
Glyma20g06760
Glyma20g06780
  • NB-ARC domainPFAMPF00931
  • Leucine Rich RepeatPFAMPF00560
  • LEUCINE-RICH REPEAT-CONTAINING PROTEINPantherPTHR23155
  • Apoptotic ATPaseKOGKOG4658
  • innate immune responsePFAMPF01582
  • apoptosisPFAMPF00931
  • PFAMPF05729
  • LEUCINE-RICH REPEAT-CONTAINING PROTEINPantherPTHR23155
  • Apoptotic ATPaseKOGKOG4658
  • disease resistance protein (TIR-NBS-LRR class), putativeATAT5G17680
Glyma20g06810
  • Plant protein of unknown function (DUF868)PFAMPF05910
  • Plant protein of unknown function (DUF868)PFAMPF05910
  • Plant protein of unknown function (DUF868)ATAT2G04220
Glyma20g06820
  • Glycosyl hydrolase family 9PFAMPF00759
  • ENDO-1,4-BETA-GLUCANASEPantherPTHR22298
  • hydrolase activity, hydrolyzing O-glycosyl compoundsPFAMPF00759
  • ENDO-1,4-BETA-GLUCANASEPantherPTHR22298
  • Six-hairpin glycosidases superfamily proteinATAT1G65610
Glyma20g06830
Glyma20g06900
Glyma20g06970
Glyma20g07040
Glyma20g07051
Glyma20g07060
  • AMP-binding enzymePFAMPF00501
  • AMP DEPENDENT LIGASE/SYNTHETASEPantherPTHR11968
  • Acyl-CoA synthetaseKOGKOG1180
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=fatty acid activationSoyCycPWY-5143
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=linoleate biosynthesis I (plants)SoyCycPWY-5995
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=fatty acid β-oxidation II (core pathway)SoyCycPWY-5136
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=superpathway of glyoxylate cycle and fatty acid degradationSoyCycPWY-561
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=stearate biosynthesis I animalsSoyCycPWY-5972
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=fatty acid activationSoyCycPWY-5143
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=fatty acid beta-oxidation II core pathwaySoyCycPWY-5136
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=fatty acid beta-oxidation ISoyCycFAO-PWY
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=delta-linolenate biosynthesis II animalsSoyCycPWY-6000
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=linoleate biosynthesis II animalsSoyCycPWY-6001
  • catalytic activityPFAMPF00501
  • AMP DEPENDENT LIGASE/SYNTHETASEPantherPTHR11968
  • Acyl-CoA synthetaseKOGKOG1180
  • AMP-dependent synthetase and ligase family proteinATAT2G04350
Glyma20g07270
Glyma20g07280
  • AMP-binding enzymePFAMPF00501
  • AMP DEPENDENT LIGASE/SYNTHETASEPantherPTHR11968
  • Acyl-CoA synthetaseKOGKOG1180
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=fatty acid activationSoyCycPWY-5143
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=linoleate biosynthesis I (plants)SoyCycPWY-5995
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=fatty acid β-oxidation II (core pathway)SoyCycPWY-5136
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=superpathway of glyoxylate cycle and fatty acid degradationSoyCycPWY-561
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=stearate biosynthesis I animalsSoyCycPWY-5972
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=fatty acid activationSoyCycPWY-5143
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=fatty acid beta-oxidation II core pathwaySoyCycPWY-5136
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=fatty acid beta-oxidation ISoyCycFAO-PWY
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=delta-linolenate biosynthesis II animalsSoyCycPWY-6000
  • Activity=Long-chain-fatty-acid-CoA ligase; Pathway=linoleate biosynthesis II animalsSoyCycPWY-6001
  • catalytic activityPFAMPF00501
  • AMP DEPENDENT LIGASE/SYNTHETASEPantherPTHR11968
  • Acyl-CoA synthetaseKOGKOG1180
  • long-chain-fatty-acid—CoA ligaseEC6.2.1.3
  • long-chain acyl-CoA synthetase [EC:6.2.1.3]KOK01897
  • AMP-dependent synthetase and ligase family proteinATAT2G04350
Glyma20g07300
Glyma20g07443
  • ribosomePFAMPF00572
  • ribosomePantherPTHR11545
  • Mitochondrial/chloroplast ribosomal protein L13KOGKOG3203
  • large subunit ribosomal protein L13KOK02871
  • Ribosomal protein L13 family proteinATAT3G01790






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