Genes Covered By A Chromosome Alteration FN300012.02.BC1F3.1

Gene Name

Gene Annotation

Glyma01g06700

Hemimethylated DNA-binding protein YccV like PFAM PF08755
nucleotide-excision repair PFAM PF02151
Hemimethylated DNA-binding protein YccV like PFAM PF08755
uvrB/uvrC motif-containing protein AT AT2G03390

Glyma01g06720

Glycosyl hydrolases family 18 PFAM PF00704
hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF00704
chitinase A AT AT5G24090

Glyma01g06730

Macro domain PFAM PF01661
GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED Panther PTHR11106
Hismacro and SEC14 domain-containing proteins KOG KOG2633
Macro domain PFAM PF01661
GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED Panther PTHR11106
Hismacro and SEC14 domain-containing proteins KOG KOG2633
appr-1-p processing enzyme family protein AT AT1G69340

Glyma01g06740

AT AT2G03420

Glyma01g06750

26S proteasome regulatory complex, subunit PSMD10 KOG KOG4412
PSMD10; 26S proteasome non-ATPase regulatory subunit 10 KO K06694
Ankyrin repeat PFAM PF00023
ANKYRIN REPEAT-CONTAINING Panther PTHR18958
protein binding PFAM PF00023
ANKYRIN REPEAT-CONTAINING Panther PTHR18958
26S proteasome regulatory complex, subunit PSMD10 KOG KOG4412
26S proteasome non-ATPase regulatory subunit 10 KO K06694
Ankyrin repeat family protein AT AT2G03430

Glyma01g06762

HELICASE-RELATED Panther PTHR10492

Glyma01g06774

ANION EXCHANGE PROTEIN-RELATED Panther PTHR11453:SF6
HCO3- transporter family AT AT1G15460

Glyma01g06787

HSP40, SUBFAMILY B, MEMBERS 1,4,5 Panther PTHR11821:SF42
Chaperone DnaJ-domain superfamily protein AT AT5G49580

Glyma01g06800

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
FAMILY NOT NAMED Panther PTHR13139
FAMILY NOT NAMED Panther PTHR13139
RING/U-box superfamily protein AT AT1G69330

Glyma01g06810

Remorin, C-terminal region PFAM PF03763
Remorin, C-terminal region PFAM PF03763
Remorin family protein AT AT1G13920

Glyma01g06820

2OG-Fe(II) oxygenase superfamily PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
oxidoreductase activity PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
senescence-related gene 1 AT AT1G17020

Glyma01g06830

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
mitochondrial editing factor 21 AT AT2G20540

Glyma01g06840

Leucine Rich Repeat PFAM PF00560
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Golgi apparatus GO GO:0005794
signal transduction GO GO:0007165
protein binding PFAM PF00560
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Leucine-rich repeat (LRR) family protein AT AT5G61240

Glyma01g06850

CLAVATA3/ESR-RELATED 9 AT AT1G26600

Glyma01g06860

SNARE domain PFAM PF05739
SYNAPTOSOMAL ASSOCIATED PROTEIN Panther PTHR19305
SNAP-25 (synaptosome-associated protein) component of SNARE complex KOG KOG3065
synaptosomal-associated protein, 29kDa KO K08509
protein binding PFAM PF05739
SYNAPTOSOMAL ASSOCIATED PROTEIN Panther PTHR19305
SNAP-25 (synaptosome-associated protein) component of SNARE complex KOG KOG3065
synaptosomal-associated protein, 29kDa KO K08509
soluble N-ethylmaleimide-sensitive factor adaptor protein 30 AT AT1G13890

Glyma01g06870

WRKY DNA -binding domain PFAM PF03106
sequence-specific DNA binding PFAM PF03106
WRKY DNA-binding protein 57 AT AT1G69310

Glyma01g06880

Zinc finger, C2H2 type PFAM PF00096
ZINC FINGER PROTEIN Panther PTHR11389
ZINC FINGER PROTEIN Panther PTHR11389
C2H2-like zinc finger protein AT AT1G26610

Glyma01g06902

intracellular PFAM PF00164
intracellular Panther PTHR11652
ribosomal protein S12A AT ATCG00065

Glyma01g06924

ACT-like superfamily protein AT AT2G36840

Glyma01g06947

dihydrodipicolinate reductase activity PFAM PF01113
dihydrodipicolinate reductase activity Panther PTHR20836
Dihydrodipicolinate reductase, bacterial/plant AT AT5G52100

Glyma01g06970

UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PFAM PF03720
UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE Panther PTHR11374
UDP-glucose/GDP-mannose dehydrogenase KOG KOG2666
UDP-glucose 6-dehydrogenase. EC 1.1.1.22
E1.1.1.22, ugd; UDPglucose 6-dehydrogenase [EC:1.1.1.22 ] [COG:COG1004 ] [GO:0003979 ] KO K00012
endomembrane system GO GO:0012505
cell wall GO GO:0005618
coenzyme binding GO GO:0050662
cytosol GO GO:0005829
oxidation-reduction process GO GO:0055114
nucleus GO GO:0005634
NAD binding GO GO:0051287
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO GO:0016616
binding GO GO:0005488
metabolic process GO GO:0008152
oxidoreductase activity GO GO:0016491
UDP-glucose 6-dehydrogenase activity GO GO:0003979
catalytic activity GO GO:0003824
Activity=UDP-glucose 6-dehydrogenase; Pathway=UDP-sugars interconversion SoyCyc PWY-5114
Activity=UDP-glucose 6-dehydrogenase; Pathway=galactose degradation III SoyCyc PWY-3821
Activity=UDP-glucose 6-dehydrogenase; Pathway=UDP-D-xylose and UDP-D-glucuronate biosynthesis SoyCyc PWY-4821
Activity=UDP-glucose 6-dehydrogenase; Pathway=colanic acid building blocks biosynthesis SoyCyc COLANSYN-PWY
Activity=UDP-glucose 6-dehydrogenase; Pathway=UDP-D-xylose biosynthesis SoyCyc PWY-4821
Activity=UDP-glucose 6-dehydrogenase; Pathway=UDP-sugars interconversion SoyCyc PWY-5114
Activity=UDP-glucose 6-dehydrogenase; Pathway=Galactose degradation II SoyCyc PWY-3821
Activity=UDP-glucose 6-dehydrogenase; Pathway=colanic acid building blocks biosynthesis SoyCyc COLANSYN-PWY
NAD binding PFAM PF03721
NAD binding PFAM PF00984
NAD binding PFAM PF03720
UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE Panther PTHR11374
UDP-glucose/GDP-mannose dehydrogenase KOG KOG2666
UDP-glucose 6-dehydrogenase EC 1.1.1.22
UDPglucose 6-dehydrogenase [EC:1.1.1.22] KO K00012
UDP-glucose 6-dehydrogenase family protein AT AT3G29360

Glyma01g06980

Glycosyl hydrolase family 1 PFAM PF00232
GLYCOSIDE HYDROLASES Panther PTHR10353
Beta-glucosidase, lactase phlorizinhydrolase, and related proteins KOG KOG0626
hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF00232
hydrolase activity, hydrolyzing O-glycosyl compounds Panther PTHR10353
Beta-glucosidase, lactase phlorizinhydrolase, and related proteins KOG KOG0626
beta glucosidase 40 AT AT1G26560

Glyma01g06995

hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF00232
hydrolase activity, hydrolyzing O-glycosyl compounds Panther PTHR10353
beta glucosidase 40 AT AT1G26560

Glyma01g07010

Cobalamin synthesis protein cobW C-terminal domain PFAM PF07683
COBW-RELATED Panther PTHR13748
Cobalamin synthesis protein KOG KOG2743
CobW/HypB/UreG, nucleotide-binding domain PFAM PF02492
Cobalamin synthesis protein cobW C-terminal domain PFAM PF07683
COBW-RELATED Panther PTHR13748
Cobalamin synthesis protein KOG KOG2743
Cobalamin biosynthesis CobW-like protein AT AT1G26520

Glyma01g07020

Methyltransferase domain PFAM PF08241
METHYLTRANSFERASE Panther PTHR10108
methyltransferase activity PFAM PF03141
Methyltransferase domain PFAM PF08241
METHYLTRANSFERASE Panther PTHR10108
QUASIMODO2 LIKE 1 AT AT1G13860
QUASIMODO2 LIKE 2 AT AT2G03480

Glyma01g07040

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Pentatricopeptide repeat (PPR) superfamily protein AT AT1G26500

Glyma01g07046

Replication factor-A C terminal domain PFAM PF08646

Glyma01g07053

PIF1 helicase PFAM PF05970
HELICASE-RELATED Panther PTHR10492
DNA helicase PIF1/RRM3 KOG KOG0987
PIF1 helicase AT AT5G28780

Glyma01g07060

Exostosin family PFAM PF03016
EXOSTOSIN (HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED Panther PTHR11062
Acetylglucosaminyltransferase EXT1/exostosin 1 KOG KOG1021
membrane PFAM PF03016
EXOSTOSIN (HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED Panther PTHR11062
Acetylglucosaminyltransferase EXT1/exostosin 1 KOG KOG1021
exostosin family protein AT AT3G45400

Glyma01g07070

14-3-3 protein PFAM PF00244
14-3-3 Panther PTHR18860
Multifunctional chaperone (14-3-3 family) KOG KOG0841
protein phosphorylated amino acid binding GO GO:0045309
14-3-3 protein PFAM PF00244
protein domain specific binding Panther PTHR18860
Multifunctional chaperone (14-3-3 family) KOG KOG0841
general regulatory factor 12 AT AT1G26480

Glyma01g07080

Glyma01g07091

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT1G26460

Glyma01g07100

X8 domain PFAM PF07983
X8 domain PFAM PF07983
plasmodesmata callose-binding protein 3 AT AT1G18650

Glyma01g07110

alpha/beta hydrolase fold PFAM PF00561
ALPHA/BETA HYDROLASE RELATED Panther PTHR10992
Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) KOG KOG1454
alpha/beta hydrolase fold PFAM PF00561
ALPHA/BETA HYDROLASE RELATED Panther PTHR10992
Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) KOG KOG1454
alpha/beta-Hydrolases superfamily protein AT AT1G13820

Glyma01g07120

Fatty acid elongase 3-ketoacyl-CoA synthase 1 PFAM PF07168
Fatty acid elongase 3-ketoacyl-CoA synthase 1 PFAM PF07168
PFAM PF06800
ureide permease 2 AT AT2G03530

Glyma01g07130

Cytochrome b(N-terminal)/b6/petB PFAM PF00033
CYTOCHROME B Panther PTHR19271
PETB; cytochrome b6 [COG:COG1290 ] KO K02635
oxidoreductase activity PFAM PF00033
respiratory electron transport chain Panther PTHR19271
cytochrome b6 KO K02635
photosynthetic electron transfer B AT ATCG00720

Glyma01g07140

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
ATP binding;nucleic acid binding;helicases AT AT1G12700

Glyma01g07150

Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein AT AT3G51950

Glyma01g07155

gb def: serine-threonine phosophatase 2c [toxoplasma gondii] Panther PTHR13832:SF25

Glyma01g07160

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
ATP binding;nucleic acid binding;helicases AT AT1G12700

Glyma01g07175

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Pentatricopeptide repeat (PPR) superfamily protein AT AT5G50280

Glyma01g07190

Protein of unknown function, DUF647 PFAM PF04884
FAMILY NOT NAMED Panther PTHR12770
Uncharacterized conserved protein KOG KOG4249
Protein of unknown function, DUF647 PFAM PF04884
FAMILY NOT NAMED Panther PTHR12770
Uncharacterized conserved protein KOG KOG4249
Protein of unknown function, DUF647 AT AT1G13770

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain