Genes Covered By A Chromosome Alteration FN300011.03.01.M4.2

Gene Name

Gene Annotation

Glyma08g28730

DVL family PFAM PF08137
DVL family PFAM PF08137
ROTUNDIFOLIA like 21 AT AT1G67265

Glyma08g28750

Allene oxide cyclase PFAM PF06351
Allene-oxide cyclase. EC 5.3.99.6
allene oxide cyclase [EC:5.3.99.6] KO K10525
Activity=Allene-oxide cyclase; Pathway=jasmonic acid biosynthesis SoyCyc PWY-735
Activity=Allene-oxide cyclase; Pathway=superpathway of lipoxygenase SoyCyc PWY-5433
Activity=Allene-oxide cyclase; Pathway=jasmonic acid biosynthesis SoyCyc PWY-735
chloroplast PFAM PF06351
allene-oxide cyclase EC 5.3.99.6
allene oxide cyclase [EC:5.3.99.6] KO K10525
allene oxide cyclase 4 AT AT1G13280

Glyma08g28760

Glyma08g28765

Glyma08g28770

AT AT5G16030

Glyma08g28780

Glyma08g28790

NHL domain-containing protein AT AT2G01410

Glyma08g28800

Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PFAM PF01248
RIBOSOMAL PROTEIN L30 Panther PTHR11449
60S ribosomal protein L30 KOG KOG2988
RP-L30e, RPL30; large subunit ribosomal protein L30e [GO:0005842 ] KO K02908
cytosolic large ribosomal subunit GO GO:0022625
cytosolic ribosome GO GO:0022626
translation GO GO:0006412
structural constituent of ribosome GO GO:0003735
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PFAM PF01248
intracellular Panther PTHR11449
60S ribosomal protein L30 KOG KOG2988
large subunit ribosomal protein L30e KO K02908
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein AT AT1G36240

Glyma08g28810

Acetyltransferase (GNAT) family PFAM PF00583
N-TERMINAL ACETYLTRANSFERASE Panther PTHR23091
N-acetyltransferase activity PFAM PF00583
N-TERMINAL ACETYLTRANSFERASE Panther PTHR23091
N-acetyltransferase KOG KOG3139
Acyl-CoA N-acyltransferases (NAT) superfamily protein AT AT2G38130

Glyma08g28835

sequence-specific DNA binding transcription factor activity PFAM PF00847
Integrase-type DNA-binding superfamily protein AT AT5G61890

Glyma08g28860

RNA recognition motif 2 PFAM PF04059
RNA recognition motif 2 PFAM PF04059
MEI2-like protein 1 AT AT5G61960

Glyma08g28880

Homeodomain-like superfamily protein AT AT2G33550

Glyma08g28890

Ankyrin repeat PFAM PF00023
Putative GTPase activating proteins (GAPs) KOG KOG0521
Putative GTPase activating protein for Arf PFAM PF01412
CENTAURIN/ARF Panther PTHR23180
protein binding PFAM PF03114
protein binding PFAM PF00169
ARF GTPase activator activity PFAM PF01412
protein binding PFAM PF00023
CENTAURIN/ARF Panther PTHR23180
Putative GTPase activating proteins (GAPs) KOG KOG0521
ARF GTPase-activating protein AT AT5G13300

Glyma08g28900

Protein kinase domain PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Protein kinase superfamily protein AT AT5G13290

Glyma08g28910

Serine carboxypeptidase PFAM PF00450
SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE Panther PTHR11802
Serine carboxypeptidases (lysosomal cathepsin A) KOG KOG1282
serine-type carboxypeptidase activity PFAM PF00450
serine-type carboxypeptidase activity Panther PTHR11802
Serine carboxypeptidases (lysosomal cathepsin A) KOG KOG1282
serine carboxypeptidase-like 45 AT AT1G28110

Glyma08g28920

BRCA1 C Terminus (BRCT) domain PFAM PF00533
RNA POLYMERASE II CTD PHOSPHATASE Panther PTHR23081
protein binding PFAM PF03031
intracellular PFAM PF00533
RNA POLYMERASE II CTD PHOSPHATASE Panther PTHR23081
C-terminal domain phosphatase-like 3 AT AT2G33540

Glyma08g28950

SAM domain (Sterile alpha motif) PFAM PF00536
SCP160 Panther PTHR10627:SF2
RNA-binding protein Bicaudal-C KOG KOG4374
protein binding PFAM PF07647
SAM domain (Sterile alpha motif) PFAM PF00536
SCP160 Panther PTHR10627:SF2
RNA-binding protein Bicaudal-C KOG KOG4374
Sterile alpha motif (SAM) domain-containing protein AT AT3G48800

Glyma08g28962

RING FINGER PROTEIN Panther PTHR10825:SF1
RING finger protein AT AT5G13250
RING FINGER PROTEIN Panther PTHR10825:SF3

Glyma08g28974

Dirigent-like protein PFAM PF03018
NUCLEOPORIN-RELATED Panther PTHR21495
Disease resistance-responsive (dirigent-like protein) family protein AT AT2G39430

Glyma08g28986

Glyma08g28998

DNA binding PFAM PF02892
Protein of unknown function (DUF 659) PFAM PF04937
protein dimerization activity PFAM PF05699
hAT transposon superfamily AT AT4G15020

Glyma08g29010

SET domain PFAM PF00856
PHD FINGER PROTEINS Panther PTHR13793
Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases KOG KOG1080
PWWP domain PFAM PF00855
nucleus PFAM PF05964
nucleus PFAM PF05965
protein binding PFAM PF00856
PHD FINGER PROTEINS Panther PTHR13793
trithorax-like protein 2 AT AT1G05830

Glyma08g29030

Importin-beta N-terminal domain PFAM PF03810
IMPORTIN (RAN-BINDING PROTEIN) Panther PTHR10997
Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) KOG KOG1991
protein transporter activity PFAM PF03810
intracellular protein transport PFAM PF08506
IMPORTIN (RAN-BINDING PROTEIN) Panther PTHR10997
Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) KOG KOG1991
ARM repeat superfamily protein AT AT2G31660

Glyma08g29040

ASPARTYL PROTEASES Panther PTHR13683
Aspartyl protease KOG KOG1339
aspartic-type endopeptidase activity PFAM PF00026
aspartic-type endopeptidase activity Panther PTHR13683
Aspartyl protease KOG KOG1339
Eukaryotic aspartyl protease family protein AT AT1G05840

Glyma08g29050

NB-ARC domain PFAM PF00931
Apoptotic ATPase KOG KOG4658
apoptosis PFAM PF00931
Apoptotic ATPase KOG KOG4658
NB-ARC domain-containing disease resistance protein AT AT3G46530

Glyma08g29060

Protein phosphatase 2C PFAM PF00481
PROTEIN PHOSPHATASE 2C Panther PTHR13832
Serine/threonine protein phosphatase KOG KOG0698
catalytic activity PFAM PF00481
PROTEIN PHOSPHATASE 2C Panther PTHR13832
Serine/threonine protein phosphatase KOG KOG0698
Protein phosphatase 2C family protein AT AT3G02750

Glyma08g29090

Chitinase class I PFAM PF00182
CHITINASE-RELATED Panther PTHR22595
Predicted chitinase KOG KOG4742
chitin catabolic process PFAM PF00182
CHITINASE-RELATED Panther PTHR22595
Predicted chitinase KOG KOG4742
Chitinase family protein AT AT1G05850

Glyma08g29100

P21-Rho-binding domain PFAM PF00786
GTPASE ACTIVATING PROTEIN Panther PTHR23177:SF2
protein binding PFAM PF00786
GTPASE ACTIVATING PROTEIN Panther PTHR23177:SF2
ROP-interactive CRIB motif-containing protein 4 AT AT5G16490

Glyma08g29110

Exostosin family PFAM PF03016
EXOSTOSIN (HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED Panther PTHR11062
Acetylglucosaminyltransferase EXT1/exostosin 1 KOG KOG1021
membrane PFAM PF03016
EXOSTOSIN (HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED Panther PTHR11062
Acetylglucosaminyltransferase EXT1/exostosin 1 KOG KOG1021
Exostosin family protein AT AT4G13990

Glyma08g29130

Aldo/keto reductase family PFAM PF00248
ALDO/KETO REDUCTASE Panther PTHR11732
Voltage-gated shaker-like K+ channel, subunit beta/KCNAB KOG KOG1575
Aldo/keto reductase family PFAM PF00248
oxidoreductase activity Panther PTHR11732
Voltage-gated shaker-like K+ channel, subunit beta/KCNAB KOG KOG1575
NAD(P)-linked oxidoreductase superfamily protein AT AT1G60710

Glyma08g29140

Ycf1 PFAM PF05758
Ycf1 protein AT ATCG01130

Glyma08g29150

Protein of unknown function (DUF1664) PFAM PF07889
Protein of unknown function (DUF1664) PFAM PF07889
Protein of unknown function (DUF1664) AT AT1G24265

Glyma08g29160

VRR-NUC domain PFAM PF08774
Uncharacterized conserved protein KOG KOG2143
nucleic acid binding PFAM PF08797
hydrolase activity, acting on ester bonds PFAM PF08774
Uncharacterized conserved protein KOG KOG2143
zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides AT AT1G48360

Glyma08g29170

F-box domain PFAM PF00646
protein binding PFAM PF00646
F-box family protein AT AT5G49610

Glyma08g29180

Glyma08g29195

Glyma08g29210

Uncharacterised protein family UPF0005 PFAM PF01027
Predicted membrane protein KOG KOG4711
response to aluminum ion PFAM PF11744
transport PFAM PF04632
Predicted membrane protein KOG KOG4711
Aluminium activated malate transporter family protein AT AT1G25480

Glyma08g29420

AT AT3G25805

Glyma08g29460

Tat binding protein 1(TBP-1)-interacting protein (TBPIP) PFAM PF07106
TBP-1 INTERACTING PROTEIN Panther PTHR15938
TBP-1 interacting protein KOG KOG4603
PSMC3IP; 26S proteasome regulatory subunit, ATPase 3, interacting protein KO K06695
Tat binding protein 1(TBP-1)-interacting protein (TBPIP) PFAM PF07106
TBP-1 INTERACTING PROTEIN Panther PTHR15938
TBP-1 interacting protein KOG KOG4603
Arabidopsis Hop2 homolog AT AT1G13330

Glyma08g29470

Eukaryotic protein of unknown function, DUF292 PFAM PF03398
UNCHARACTERIZED DUF292 Panther PTHR12161
Spindle pole body protein KOG KOG2027
Regulator of Vps4 activity in the MVB pathway PFAM PF03398
UNCHARACTERIZED DUF292 Panther PTHR12161
Spindle pole body protein KOG KOG2027
Regulator of Vps4 activity in the MVB pathway protein AT AT1G13340

Glyma08g29500

AQUAPORIN TRANSPORTER Panther PTHR19139
transport PFAM PF00230
transport Panther PTHR19139
NOD26-like major intrinsic protein 1 AT AT4G19030

Glyma08g29710

F-box domain PFAM PF00646
protein binding PFAM PF00646
F-box and associated interaction domains-containing protein AT AT4G12560

Glyma08g29920

AT AT1G68440

Glyma08g30140

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PFAM PF08541
response to light stimulus GO GO:0009416
endoplasmic reticulum GO GO:0005783
response to cold GO GO:0009409
unidimensional cell growth GO GO:0009826
cuticle development GO GO:0042335
wax biosynthetic process GO GO:0010025
very long-chain fatty acid metabolic process GO GO:0000038
catalytic activity GO GO:0003824
transferase activity, transferring acyl groups other than amino-acyl groups GO GO:0016747
Activity=fatty acid elongase; Pathway=sciadonic acid biosynthesis SoyCyc PWY-6598
Activity=fatty acid elongase; Pathway=wax esters biosynthesis I SoyCyc PWY-5884
fatty acid biosynthetic process PFAM PF08392
acyltransferase activity PFAM PF00195
acyltransferase activity PFAM PF02797
lipid biosynthetic process PFAM PF08541
3-ketoacyl-CoA synthase 6 AT AT1G68530

Glyma08g30150

Homocysteine S-methyltransferase PFAM PF02574
METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED Panther PTHR21091
Homocysteine S-methyltransferase KOG KOG1579
homocysteine S-methyltransferase activity PFAM PF02574
METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED Panther PTHR21091
Homocysteine S-methyltransferase KOG KOG1579
homocysteine S-methyltransferase EC 2.1.1.10
homocysteine S-methyltransferase [EC:2.1.1.10] KO K00547
Homocysteine S-methyltransferase family protein AT AT3G25900
5-METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE Panther PTHR21091:SF4

Glyma08g30433

RFWD3 PROTEIN Panther PTHR16047
Transducin/WD40 repeat-like superfamily protein AT AT5G03450

Glyma08g30716

sequence-specific DNA binding transcription factor activity PFAM PF00847
Integrase-type DNA-binding superfamily protein AT AT1G68550

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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