Genes Covered By A Chromosome Alteration FN250100.02.01.M4.2

Gene Name

Gene Annotation

Glyma01g37190

Homeobox domain PFAM PF00046
sequence-specific DNA binding PFAM PF00046
Homeodomain-like superfamily protein AT AT2G17950

Glyma01g37200

Glyma01g37215

Auxin responsive protein PFAM PF02519
SAUR family protein KO K14488
SAUR-like auxin-responsive protein family AT AT2G21220

Glyma01g37230

Glyma01g37240

M protein repeat PFAM PF02370
Plant protein of unknown function (DUF869) PFAM PF05911
Plant protein of unknown function (DUF869) AT AT4G36120

Glyma01g37250

Ribosomal Proteins L2, C-terminal domain PFAM PF03947
RIBOSOMAL PROTEIN L2 Panther PTHR13691
60s ribosomal protein L2/L8 KOG KOG2309
RP-L8e, RPL8; large subunit ribosomal protein L8e [GO:0005842 ] KO K02938
protein binding GO GO:0005515
nucleolus GO GO:0005730
vacuolar membrane GO GO:0005774
chloroplast GO GO:0009507
embryo development ending in seed dormancy GO GO:0009793
plasma membrane GO GO:0005886
cytosolic large ribosomal subunit GO GO:0022625
cytosolic ribosome GO GO:0022626
vacuole GO GO:0005773
ribosome GO GO:0005840
translation GO GO:0006412
structural constituent of ribosome GO GO:0003735
intracellular PFAM PF00181
intracellular PFAM PF03947
intracellular Panther PTHR13691
60s ribosomal protein L2/L8 KOG KOG2309
large subunit ribosomal protein L8e KO K02938
Ribosomal protein L2 family AT AT4G36130

Glyma01g37270

NAD dependent epimerase/dehydratase family PFAM PF01370
NAD DEPENDENT EPIMERASE/DEHYDRATASE Panther PTHR10366
GDP-mannose 4,6 dehydratase KOG KOG1372
GDP-mannose 4,6-dehydratase. EC 4.2.1.47
E4.2.1.47, gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47 ] [COG:COG1089 ] [GO:0008446 ] KO K01711
protein binding GO GO:0005515
cellular metabolic process GO GO:0044237
GDP-mannose metabolic process GO GO:0019673
nucleotide-sugar metabolic process GO GO:0009225
intracellular GO GO:0005622
metabolic process GO GO:0008152
'de novo' GDP-L-fucose biosynthetic process GO GO:0042351
GDP-mannose 4,6-dehydratase activity GO GO:0008446
unidimensional cell growth GO GO:0009826
cytosol GO GO:0005829
Activity=GDP-mannose 4,6-dehydratase; Pathway=GDP-L-fucose biosynthesis I (from GDP-D-mannose) SoyCyc PWY-66
Activity=GDP-mannose 4,6-dehydratase; Pathway=colanic acid building blocks biosynthesis SoyCyc COLANSYN-PWY
Activity=GDP-mannose 4,6-dehydratase; Pathway=colanic acid building blocks biosynthesis SoyCyc COLANSYN-PWY
Activity=GDP-mannose 4,6-dehydratase; Pathway=GDP-alpha-D-perosamine biosynthesis SoyCyc PWY-5739
Activity=GDP-mannose 4,6-dehydratase; Pathway=GDP-L-fucose biosynthesis I from GDP-D-mannose SoyCyc PWY-66
coenzyme binding PFAM PF01370
dTDP-4-dehydrorhamnose reductase activity PFAM PF04321
NAD DEPENDENT EPIMERASE/DEHYDRATASE Panther PTHR10366
GDP-mannose 4,6 dehydratase KOG KOG1372
GDP-mannose 4,6-dehydratase EC 4.2.1.47
GDPmannose 4,6-dehydratase [EC:4.2.1.47] KO K01711
NAD(P)-binding Rossmann-fold superfamily protein AT AT3G51160

Glyma01g37290

AT AT5G66290

Glyma01g37296

Glyma01g37303

Glyma01g37310

No apical meristem (NAM) protein PFAM PF02365
regulation of transcription, DNA-dependent PFAM PF02365
vascular related NAC-domain protein 1 AT AT2G18060

Glyma01g37320

ATP synthase subunit C PFAM PF00137
VACUOLAR ATP SYNTHASE PROTEOLIPID SUBUNIT Panther PTHR10263
Vacuolar H+-ATPase V0 sector, subunits c/c' KOG KOG0232
H(+)-transporting two-sector ATPase. EC 3.6.3.14
ATPeVPL, ATP6L; V-type H+-transporting ATPase 16kDa proteolipid subunit [EC:3.6.3.14 ] [COG:COG0636 ] [GO:0003936 ] KO K02155
vacuolar proton-transporting V-type ATPase, V0 domain GO GO:0000220
vacuolar membrane GO GO:0005774
proton transport GO GO:0015992
proton-transporting ATPase activity, rotational mechanism GO GO:0046961
protein binding GO GO:0005515
plasma membrane GO GO:0005886
vacuole GO GO:0005773
ATPase activity GO GO:0016887
ATP synthesis coupled proton transport GO GO:0015986
proton-transporting two-sector ATPase complex, proton-transporting domain PFAM PF00137
VACUOLAR ATP SYNTHASE PROTEOLIPID SUBUNIT Panther PTHR10263
Vacuolar H+-ATPase V0 sector, subunits c/c' KOG KOG0232
H+-transporting two-sector ATPase EC 3.6.3.14
V-type H+-transporting ATPase 16kDa proteolipid subunit [EC:3.6.3.14] KO K02155
vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 AT AT1G75630

Glyma01g37330

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
protein binding PFAM PF00560
Protein tyrosine kinase PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine-rich receptor-like protein kinase family protein AT AT4G36180

Glyma01g37341

microtubule motor activity PFAM PF00225
Domain of unknown function (DUF3490) PFAM PF11995
KINESIN HEAVY CHAIN Panther PTHR16012
Kinesin-like protein KOG KOG0242
ATP binding microtubule motor family protein AT AT3G51150

Glyma01g37350

PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) Panther PTHR10804
cellular process PFAM PF00557
PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) Panther PTHR10804
Metallopeptidase M24 family protein AT AT4G29490

Glyma01g37360

Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFAM PF00903
LACTOYLGLUTATHIONE LYASE Panther PTHR10374
Glyoxalase KOG KOG2944
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFAM PF00903
LACTOYLGLUTATHIONE LYASE Panther PTHR10374
Glyoxalase KOG KOG2944
Lactoylglutathione lyase / glyoxalase I family protein AT AT1G80160

Glyma01g37370

B-box zinc finger PFAM PF00643
intracellular PFAM PF00643
B-box type zinc finger family protein AT AT4G38960

Glyma01g37380

Uncharacterised protein family (UPF0183) PFAM PF03676
FAMILY NOT NAMED Panther PTHR13465
Uncharacterized conserved protein KOG KOG2819
Uncharacterised protein family (UPF0183) PFAM PF03676
UPF0183 PROTEIN Panther PTHR13465
Uncharacterized conserved protein KOG KOG2819
AT AT3G51130

Glyma01g37393

protein binding PFAM PF02201
transcription initiation, DNA-dependent PFAM PF03126
protein binding PFAM PF02213
GRB10 INTERACTING GYF PROTEIN Panther PTHR14445
RNA polymerase I transcription factor UAF KOG KOG1946
DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding AT AT3G51120

Glyma01g37406

protein binding PFAM PF02213
GRB10 INTERACTING GYF PROTEIN Panther PTHR14445
DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding AT AT3G51120

Glyma01g37420

Protein of unknown function (DUF726) PFAM PF05277
FAMILY NOT NAMED Panther PTHR17920
Uncharacterized conserved protein KOG KOG2385
Protein of unknown function (DUF726) PFAM PF05277
UNCHARACTERIZED Panther PTHR17920
Uncharacterized conserved protein KOG KOG2385
Protein of unknown function (DUF726) AT AT4G36210

Glyma01g37430

Cytochrome P450 PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156
Acting on paired donors, with incorporation or reduction of EC 1.14.-.-
ferulate-5-hydroxylase [EC:1.14.-.-] KO K09755
Activity=monooxygenase; Pathway=luteolin biosynthesis SoyCyc PWY-5060
Activity=monooxygenase; Pathway=flavonol biosynthesis SoyCyc PWY-3101
Activity=monooxygenase; Pathway=leucodelphinidin biosynthesis SoyCyc PWY-5152
Activity=monooxygenase; Pathway=leucopelargonidin and leucocyanidin biosynthesis SoyCyc PWY1F-823
Activity=monooxygenase; Pathway=suberin biosynthesis SoyCyc PWY-1121
Activity=monooxygenase; Pathway=brassinosteroid biosynthesis II SoyCyc PWY-2582
Activity=monooxygenase; Pathway=phenylpropanoid biosynthesis SoyCyc PWY-361
Activity=monooxygenase; Pathway=rosmarinic acid biosynthesis I SoyCyc PWY-5048
Activity=monooxygenase; Pathway=brassinosteroid biosynthesis I SoyCyc PWY-699
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156
Acting on paired donors, with incorporation or reduction of EC 1.14.-.-
ferulate-5-hydroxylase [EC:1.14.-.-] KO K09755
ferulic acid 5-hydroxylase 1 AT AT4G36220

Glyma01g37440

Glyma01g37450

GATA zinc finger PFAM PF00320
SUBFAMILY NOT NAMED Panther PTHR22949:SF3
GATA-4/5/6 transcription factors KOG KOG1601
sequence-specific DNA binding PFAM PF00320
SUBFAMILY NOT NAMED Panther PTHR22949:SF3
GATA-4/5/6 transcription factors KOG KOG1601
GATA transcription factor 5 AT AT5G66320

Glyma01g37460

Leucine Rich Repeat PFAM PF00560
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
protein binding PFAM PF00560
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Leucine-rich repeat (LRR) family protein AT AT5G66330

Glyma01g37470

K-box region PFAM PF01486
MADS BOX PROTEIN Panther PTHR11945
MADS box transcription factor KOG KOG0014
sequence-specific DNA binding PFAM PF00319
nucleus PFAM PF01486
MADS BOX PROTEIN Panther PTHR11945
MADS box transcription factor KOG KOG0014
K-box region and MADS-box transcription factor family protein AT AT3G54340

Glyma01g37480

Ubiquitin-conjugating enzyme PFAM PF00179
UBIQUITIN-CONJUGATING ENZYME E2 Panther PTHR11621
Ubiquitin conjugating enzyme KOG KOG0427
Ubiquitin--protein ligase. EC 6.3.2.19
ubiquitin-conjugating enzyme E2 W [EC:6.3.2.19] KO K10688
response to gibberellin stimulus GO GO:0009739
cellular_component GO GO:0005575
leaf morphogenesis GO GO:0009965
negative regulation of flower development GO GO:0009910
protein ubiquitination GO GO:0016567
ubiquitin-dependent protein catabolic process GO GO:0006511
small conjugating protein ligase activity GO GO:0019787
ubiquitin-protein ligase activity GO GO:0004842
acid-amino acid ligase activity PFAM PF00179
protein binding PFAM PF05773
UBIQUITIN-CONJUGATING ENZYME E2 Panther PTHR11621
Ubiquitin conjugating enzyme KOG KOG0427
ubiquitinÂ—protein ligase EC 6.3.2.19
ubiquitin-conjugating enzyme E2 W [EC:6.3.2.19] KO K10688
ubiquitin-conjugating enzyme 16 AT AT1G75440

Glyma01g37490

FAD linked oxidases, C-terminal domain PFAM PF02913
D-LACTATE DEHYDROGENASE Panther PTHR11748
Proteins containing the FAD binding domain KOG KOG1232
flavin adenine dinucleotide binding PFAM PF01565
flavin adenine dinucleotide binding PFAM PF02913
D-LACTATE DEHYDROGENASE Panther PTHR11748
Proteins containing the FAD binding domain KOG KOG1232
FAD-linked oxidases family protein AT AT4G36400

Glyma01g37500

TRAM domain PFAM PF01938
RADICAL SAM PROTEINS Panther PTHR11918
CDK5 activator-binding protein KOG KOG2492
4 iron, 4 sulfur cluster binding PFAM PF00919
iron-sulfur cluster binding PFAM PF04055
TRAM domain PFAM PF01938
RADICAL SAM PROTEINS Panther PTHR11918
CDK5 activator-binding protein KOG KOG2492
Methylthiotransferase AT AT4G36390

Glyma01g37510

Cytochrome P450 PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP4/CYP19/CYP26 subfamilies KOG KOG0157

Activity=oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen; Pathway=phaseic acid biosynthesis

SoyCyc

PWY-5271

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP4/CYP19/CYP26 subfamilies KOG KOG0157
Cytochrome P450 superfamily protein AT AT4G36380

Glyma01g37520

Methyltransferase domain PFAM PF08242
DIMETHYLADENOSINE TRANSFERASE Panther PTHR11727
Ribosomal RNA adenine dimethylase KOG KOG0820
Methyltransferases. EC 2.1.1.-
KO K02528
rRNA modification PFAM PF00398
Putative RNA methylase family UPF0020 PFAM PF01170
methyltransferase activity PFAM PF01209
protein methyltransferase activity PFAM PF06325
methyltransferase activity PFAM PF05175
methyltransferase activity PFAM PF08241
rRNA modification Panther PTHR11727
Ribosomal RNA adenine dimethylase KOG KOG0820
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase EC 2.1.1.183
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] KO K14191
Ribosomal RNA adenine dimethylase family protein AT AT5G66360

Glyma01g37530

Glyma01g37541

hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF01301
PFAM PF02449
sugar binding PFAM PF02140
hydrolase activity, hydrolyzing O-glycosyl compounds Panther PTHR23421
Beta-galactosidase KOG KOG0496
beta-galactosidase 3 AT AT4G36360

Glyma01g37550

Thioredoxin PFAM PF00085
THIOREDOXIN-RELATED Panther PTHR10438
Thioredoxin KOG KOG0907
cell redox homeostasis PFAM PF00085
glycerol ether metabolic process Panther PTHR10438
Thioredoxin KOG KOG0907
thioredoxin H-type 1 AT AT3G51030

Glyma01g37560

Protein of unknown function (DUF778) PFAM PF05608
FAMILY NOT NAMED Panther PTHR20921
Uncharacterized conserved protein KOG KOG3150
Protein of unknown function (DUF778) PFAM PF05608
UNCHARACTERIZED Panther PTHR20921
Uncharacterized conserved protein KOG KOG3150
RTE1-homolog AT AT3G51040

Glyma01g37571

Walls Are Thin 1 AT AT1G75500

Glyma01g37580

FG-GAP repeat PFAM PF01839
FG-GAP repeat-containing protein AT AT3G51050

Glyma01g37590

Domain of unknown function (DUF702) PFAM PF05142
Domain of unknown function (DUF702) PFAM PF05142
Lateral root primordium (LRP) protein-related AT AT5G66350

Glyma01g37600

Methyltransferase domain PFAM PF08241
METHLYTRANSFERASE, UBIE/COQ5 FAMILY Panther PTHR10108:SF26
methyltransferase activity PFAM PF03141
Methyltransferase domain PFAM PF08241
METHLYTRANSFERASE, UBIE/COQ5 FAMILY Panther PTHR10108:SF26
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein AT AT3G51070

Glyma01g37610

Glutaredoxin PFAM PF00462
GLUTAREDOXIN Panther PTHR10168
Glutaredoxin and related proteins KOG KOG1752
protein disulfide oxidoreductase activity PFAM PF00462
GLUTAREDOXIN Panther PTHR10168
Glutaredoxin and related proteins KOG KOG1752
Glutaredoxin family protein AT AT1G77370

Glyma01g37620

Leucine Rich Repeat PFAM PF00560
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Apoptotic ATPase KOG KOG4658
apoptosis PFAM PF00931
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Apoptotic ATPase KOG KOG4658
Disease resistance protein (CC-NBS-LRR class) family AT AT5G35450

Glyma01g37630

Peroxidase PFAM PF00141
Peroxidase. EC 1.11.1.7
E1.11.1.7; peroxidase [EC:1.11.1.7 ] [GO:0004601 ] KO K00430
peroxidase activity PFAM PF00141
peroxidase EC 1.11.1.7
peroxidase [EC:1.11.1.7] KO K00430
Peroxidase superfamily protein AT AT5G66390

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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