Genes Covered By A Chromosome Alteration FN201753.01.01.M4.2

Gene Name

Gene Annotation

Glyma15g34770

AP2 domain PFAM PF00847
sequence-specific DNA binding transcription factor activity PFAM PF00847
Integrase-type DNA-binding superfamily protein AT AT3G54320

Glyma15g34791

Protein of unknown function (DUF1295) PFAM PF06966
protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity PFAM PF04140
Farnesyl cysteine-carboxyl methyltransferase KOG KOG2628
protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferases AT AT5G59500

Glyma15g34810

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
sugar binding PFAM PF01453
recognition of pollen PFAM PF00954
PAN-like domain PFAM PF08276
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
protein serine/threonine kinase activity PFAM PF11883
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
S-locus lectin protein kinase family protein AT AT4G27290

Glyma15g34821

HELICASE SKI2-RELATED Panther PTHR11752:SF2
DEAD/DEAH box helicase, putative AT AT1G70070

Glyma15g34831

membrane PFAM PF00892
nodulin MtN21 /EamA-like transporter family protein AT AT5G40240

Glyma15g34840

FAR1 DNA-binding domain PFAM PF03101
FAR1 DNA-binding domain PFAM PF03101
FAR1-related sequence 3 AT AT2G27110

Glyma15g34870

Core histone H2A/H2B/H3/H4 PFAM PF00125
HISTONE H3 Panther PTHR11426
Histones H3 and H4 KOG KOG1745
chloroplast GO GO:0009507
nucleosome GO GO:0000786
nucleosome assembly GO GO:0006334
DNA binding GO GO:0003677
protein binding GO GO:0005515
DNA binding PFAM PF00125
nucleosome Panther PTHR11426
Histones H3 and H4 KOG KOG1745
histone H3 KO K11253
Histone superfamily protein AT AT5G10390

Glyma15g35070

EF hand PFAM PF00036
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED Panther PTHR22982
Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily KOG KOG0032
protein autophosphorylation GO GO:0046777
calcium-dependent protein serine/threonine kinase activity GO GO:0009931
response to symbiont GO GO:0009608
calmodulin-dependent protein kinase activity GO GO:0004683
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
EF hand PFAM PF00036
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED Panther PTHR22982
Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily KOG KOG0032
calmodulin-domain protein kinase cdpk isoform 2 AT AT3G10660

Glyma15g35080

Basic region leucine zipper PFAM PF07716
CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Panther PTHR22952
Basic region leucine zipper PFAM PF07716
protein dimerization activity PFAM PF00170
CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Panther PTHR22952
ABA-responsive element binding protein 3 AT AT3G56850

Glyma15g35110

Glyma15g35120

PHOSPHOLIPASE D Panther PTHR18896
PHOSPHOLIPASE D Panther PTHR18896
phospholipase D delta AT AT4G35790

Glyma15g35130

Cupin domain PFAM PF07883
nutrient reservoir activity PFAM PF00190
Cupin domain PFAM PF07883
RmlC-like cupins superfamily protein AT AT5G61750

Glyma15g35156

protein binding PFAM PF00240
Ubiquitin-2 like Rad60 SUMO-like PFAM PF11976
UBIQUITIN Panther PTHR10666
Ubiquitin/60s ribosomal protein L40 fusion KOG KOG0003
ubiquitin extension protein 1 AT AT3G52590

Glyma15g35183

nucleic acid binding PFAM PF01107

Glyma15g35210

Glyma15g35221

Glyma15g35230

THIAMINE PYROPHOSPHATE ENZYMES Panther PTHR18968
THIAMINE PYROPHOSPHATE ENZYMES Panther PTHR18968
pyruvate decarboxylase-2 AT AT5G54960

Glyma15g35240

Sad1 / UNC-like C-terminal PFAM PF07738
SAD1/UNC-84-LIKE PROTEIN 2 Panther PTHR12911
Spindle pole body protein, contains UNC-84 domain KOG KOG2687
Sad1 / UNC-like C-terminal PFAM PF07738
SAD1/UNC-84-LIKE PROTEIN 2 Panther PTHR12911
Spindle pole body protein, contains UNC-84 domain KOG KOG2687
SAD1/UNC-84 domain protein 1 AT AT5G04990

Glyma15g35250

Endonuclease/Exonuclease/phosphatase family PFAM PF03372
INOSITOL 5-PHOSPHATASE Panther PTHR11200
Inositol polyphosphate 5-phosphatase and related proteins KOG KOG0565
Endonuclease/Exonuclease/phosphatase family PFAM PF03372
INOSITOL 5-PHOSPHATASE Panther PTHR11200
Inositol polyphosphate 5-phosphatase and related proteins KOG KOG0565
DNAse I-like superfamily protein AT AT5G04980

Glyma15g35263

Glyma15g35276

Glyma15g35290

Pectinesterase PFAM PF01095
pectinesterase activity PFAM PF04043
cell wall modification PFAM PF01095
pectinesterase EC 3.1.1.11
pectinesterase [EC:3.1.1.11] KO K01051
Plant invertase/pectin methylesterase inhibitor superfamily AT AT3G10720

Glyma15g35330

Prenyltransferase and squalene oxidase repeat PFAM PF00432
Oxidosqualene-lanosterol cyclase and related proteins KOG KOG0497
Activity=β-amyrin_synthase, Cycloartenol synthase, beta-amyrin synthase; Pathway=plant sterol biosynthesis SoyCyc PWY-2541
Activity=β-amyrin_synthase, Cycloartenol synthase, beta-amyrin synthase; Pathway=lanosterol biosynthesis SoyCyc PWY-6132
Activity=β-amyrin_synthase, Cycloartenol synthase, beta-amyrin synthase; Pathway=cholesterol biosynthesis I SoyCyc PWY66-341
Activity=β-amyrin_synthase, Cycloartenol synthase, beta-amyrin synthase; Pathway=lupeol biosynthesis SoyCyc PWY-112
Activity=β-amyrin_synthase, Cycloartenol synthase, beta-amyrin synthase; Pathway=soybean saponin I biosynthesis SoyCyc PWY-5203
Activity=β-amyrin_synthase, Cycloartenol synthase, beta-amyrin synthase; Pathway=α-amyrin biosynthesis SoyCyc PWY-5377
catalytic activity PFAM PF00432
Oxidosqualene-lanosterol cyclase and related proteins KOG KOG0497
cycloartenol synthase 1 AT AT2G07050

Glyma15g35351

Calcium-binding endonuclease/exonuclease/phosphatase family AT AT5G54130

Glyma15g35371

DNA photolyase activity PFAM PF03441
DNA PHOTOLYASE Panther PTHR11455
cryptochrome 2 AT AT1G04400

Glyma15g35390

Pectinesterase PFAM PF01095
Activity=pectinesterase; Pathway=homogalacturonan degradation SoyCyc PWY-1081
Activity=pectinesterase; Pathway=homogalacturonan degradation SoyCyc PWY-1081
pectinesterase activity PFAM PF04043
cell wall modification PFAM PF01095
root hair specific 12 AT AT3G10710

Glyma15g35410

NADH:flavin oxidoreductase / NADH oxidase family PFAM PF00724
NADH OXIDOREDUCTASE-RELATED Panther PTHR22893
NADH:flavin oxidoreductase/12-oxophytodienoate reductase KOG KOG0134
Activity=12-oxophytodienoate reductase; Pathway=jasmonic acid biosynthesis SoyCyc PWY-735
Activity=12-oxophytodienoate reductase; Pathway=superpathway of lipoxygenase SoyCyc PWY-5433
Activity=12-oxophytodienoate reductase; Pathway=jasmonic acid biosynthesis SoyCyc PWY-735
FMN binding PFAM PF00724
NADH OXIDOREDUCTASE-RELATED Panther PTHR22893
NADH:flavin oxidoreductase/12-oxophytodienoate reductase KOG KOG0134
12-oxophytodienoate reductase 2 AT AT1G76690

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AT ATCG01070

Glyma15g35440

Major Facilitator Superfamily PFAM PF07690
DRUG TRANSPORTER-RELATED Panther PTHR10074
Permease of the major facilitator superfamily KOG KOG2615
transmembrane transport PFAM PF07690
transmembrane transporter activity PFAM PF00083
DRUG TRANSPORTER-RELATED Panther PTHR10074
Permease of the major facilitator superfamily KOG KOG2615
zinc induced facilitator-like 1 AT AT5G13750

Glyma15g35445

RETROELEMENT POL POLYPROTEIN-RELATED Panther PTHR10178:SF22

Glyma15g35450

SET domain PFAM PF00856
SET DOMAIN PROTEINS Panther PTHR22884
Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing KOG KOG1082
histone binding PFAM PF02182
histone lysine methylation PFAM PF05033
protein binding PFAM PF00856
SET DOMAIN PROTEINS Panther PTHR22884
Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing KOG KOG1082
SU(VAR)3-9 homolog 3 AT AT1G73100
SU(VAR)3-9 homolog 1 AT AT5G04940

Glyma15g35460

PA domain PFAM PF02225
SUBTILISIN/KEXIN-RELATED SERINE PROTEASE Panther PTHR10795
identical protein binding PFAM PF05922
serine-type endopeptidase activity PFAM PF00082
PA domain PFAM PF02225
SUBTILISIN/KEXIN-RELATED SERINE PROTEASE Panther PTHR10795
Subtilisin-like serine endopeptidase family protein AT AT1G20160

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain