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Integrating Genetics and Genomics to Advance Soybean Research

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← Mutant Description Page

Genes Covered By A Chromosome Alteration FN201557.01.01.M4.1

Gene Name

Gene Annotation

NPH3 family PFAM PF03000
protein binding PFAM PF00651
response to light stimulus PFAM PF03000
Phototropic-responsive NPH3 family protein AT AT5G48800

AT AT2G30230

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Panther PTHR12183
Predicted E3 ubiquitin ligase KOG KOG1571
acid-amino acid ligase activity PFAM PF12483
UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Panther PTHR12183
Predicted E3 ubiquitin ligase KOG KOG1571
E3 Ubiquitin ligase family protein AT AT1G54150
Predicted E3 ubiquitin ligase KOG KOG4172

DNA binding PFAM PF02892
Protein of unknown function (DUF 659) PFAM PF04937
protein dimerization activity PFAM PF05699
hAT transposon superfamily AT AT4G15020

AT AT4G13200

Cytochrome b5-like Heme/Steroid binding domain PFAM PF00173
CYTOCHROME B5 Panther PTHR19359
Cytochrome b5 KOG KOG0537
heme binding PFAM PF00173
CYTOCHROME B5 Panther PTHR19359
Cytochrome b5 KOG KOG0537
cytochrome B5 isoform B AT AT2G32720

SRF-type transcription factor (DNA-binding and dimerisation domain) PFAM PF00319
MADS BOX PROTEIN Panther PTHR11945
MADS box transcription factor KOG KOG0014
sequence-specific DNA binding PFAM PF00319
MADS BOX PROTEIN Panther PTHR11945
MADS box transcription factor KOG KOG0014
AGAMOUS-like 80 AT AT5G48670

Rhomboid family PFAM PF01694
RHOMBOID-RELATED Panther PTHR22936
Rhomboid family proteins KOG KOG2289
serine-type endopeptidase activity PFAM PF01694
serine-type endopeptidase activity Panther PTHR22936
Rhomboid family proteins KOG KOG2289
RHOMBOID-like 1 AT AT2G29050

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
nucleic acid binding PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
RNA-binding (RRM/RBD/RNP motifs) family protein AT AT4G14300

sugar binding PFAM PF01453
recognition of pollen PFAM PF00954
PAN-like domain PFAM PF08276
protein phosphorylation PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
S-locus lectin protein kinase family protein AT AT1G11330

nucleic acid binding PFAM PF00098
zinc ion binding;nucleic acid binding AT AT2G01050

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Panther PTHR12183
Predicted E3 ubiquitin ligase KOG KOG0320
UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Panther PTHR12183
Predicted E3 ubiquitin ligase KOG KOG0320
RING/U-box superfamily protein AT AT3G25030

DNA-3-methyladenine glycosylase I activity PFAM PF03352
DNA glycosylase superfamily protein AT AT3G12710

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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