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Integrating Genetics and Genomics to Advance Soybean Research

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Genes Covered By A Chromosome Alteration FN200350.01.03.M4.3

Gene NameGene Annotation
Glyma05g00220
  • Cytochrome P450PFAMPF00067
  • CYTOCHROME P450PantherPTHR19383
  • Cytochrome P450 CYP2 subfamilyKOGKOG0156
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenPFAMPF00067
  • CYTOCHROME P450PantherPTHR19383
  • Cytochrome P450 CYP2 subfamilyKOGKOG0156
  • cytochrome P450, family 78, subfamily A, polypeptide 10ATAT1G74110
Glyma05g00240
  • ABC transporterPFAMPF00005
  • ATP-BINDING CASSETTE TRANSPORTERPantherPTHR19242
  • Peptide exporter, ABC superfamilyKOGKOG0058
  • ATPase activity, coupled to transmembrane movement of substancesPFAMPF00664
  • ATPase activityPFAMPF00005
  • ATP-BINDING CASSETTE TRANSPORTERPantherPTHR19242
  • Peptide exporter, ABC superfamilyKOGKOG0058
  • transporter associated with antigen processing protein 2ATAT5G39040
Glyma05g00250
  • Rhomboid familyPFAMPF01694
  • RHOMBOID-RELATEDPantherPTHR22936
  • Integral membrane protease of the rhomboid family involved in different forms of regulated intramembrane proteolysisKOGKOG2980
  • serine-type endopeptidase activityPFAMPF01694
  • serine-type endopeptidase activityPantherPTHR22936
  • Integral membrane protease of the rhomboid family involved in different forms of regulated intramembrane proteolysisKOGKOG2980
  • RHOMBOID-like protein 12ATAT1G18600
Glyma05g00260
  • Translation initiation factor 1A / IF-1PFAMPF01176
  • IF-1, infA; translation initiation factor IF-1 [COG:COG0361 ] [GO:0003743 ]KOK02518
  • translation initiation factor activityPFAMPF01176
  • translation initiation factor IF-1KOK02518
  • Nucleic acid-binding, OB-fold-like proteinATAT4G11175
Glyma05g00270
  • Kelch motifPFAMPF07646
  • KELCH REPEAT DOMAINPantherPTHR23244
  • Kelch repeat-containing proteinsKOGKOG0379
  • protein bindingPFAMPF01344
  • protein bindingPFAMPF07646
  • KELCH REPEAT DOMAINPantherPTHR23244
  • Kelch repeat-containing proteinsKOGKOG0379
  • Galactose oxidase/kelch repeat superfamily proteinATAT1G18610
Glyma05g00280
  • PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYNDROME CRITICAL REGION PROTEIN 5)-RELATEDPantherPTHR21726
  • PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYNDROME CRITICAL REGION PROTEIN 5)-RELATEDPantherPTHR21726
  • ATAT1G74160
Glyma05g00300
  • TCP family transcription factorPFAMPF03634
  • TCP family transcription factorPFAMPF03634
  • TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5ATAT5G60970
Glyma05g00310
Glyma05g00320
Glyma05g00330
  • RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)PFAMPF00076
  • RNA-BINDING RAS-GAP SH3 BINDING PROTEIN RELATEDPantherPTHR10693
  • RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domainsKOGKOG0116
  • intracellularPFAMPF02136
  • nucleic acid bindingPFAMPF00076
  • RNA-BINDING RAS-GAP SH3 BINDING PROTEIN RELATEDPantherPTHR10693
  • RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domainsKOGKOG0116
  • Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domainATAT5G60980
Glyma05g00341
  • mitochondrial import receptor subunit TOM5 homologATAT5G08040
Glyma05g00351
  • Protein of unknown function (DUF1675)PFAMPF07897
  • nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing proteinATAT3G07250
Glyma05g00360
  • Glycerophosphoryl diester phosphodiesterase familyPFAMPF03009
  • GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASEPantherPTHR23344
  • Glycerophosphoryl diester phosphodiesteraseKOGKOG2258
  • Glycerophosphodiester phosphodiesterase.EC3.1.4.46
  • E3.1.4.46, glpQ; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46 ] [COG:COG0584 ] [GO:0008889 ]KOK01126
  • Activity=glycerophosphodiester phosphodiesterase; Pathway=glycerophosphodiester degradationSoyCycPWY-6952
  • Activity=glycerophosphodiester phosphodiesterase; Pathway=glycerol and glycerophosphodiester degradationSoyCycPWY0-381
  • Activity=Glycerophosphodiester phosphodiesterase; Pathway=Glycerol degradation ISoyCycPWY0-381
  • glycerophosphodiester phosphodiesterase activityPFAMPF03009
  • glycerophosphodiester phosphodiesterase activityPantherPTHR23344
  • Glycerophosphoryl diester phosphodiesteraseKOGKOG2258
  • glycerophosphodiester phosphodiesteraseEC3.1.4.46
  • glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]KOK01126
  • PLC-like phosphodiesterases superfamily proteinATAT1G74210
Glyma05g00370
  • Replication factor-A C terminal domainPFAMPF08646
  • REPLICATION FACTOR A 1, RFA1PantherPTHR23273
  • Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteinsKOGKOG0851
  • nucleusPFAMPF04057
  • nucleic acid bindingPFAMPF01336
  • Replication factor-A C terminal domainPFAMPF08646
  • REPLICATION FACTOR A 1, RFA1PantherPTHR23273
  • Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteinsKOGKOG0851
  • replication factor A1KOK07466
  • RPA70-kDa subunit BATAT5G08020
Glyma05g00380
Glyma05g00390
  • PresenilinPFAMPF01080
  • PRESENILINPantherPTHR10202
  • PresenilinKOGKOG2736
  • PSENN, PSN; presenilin, non-vertebrateKOK06060
  • aspartic-type endopeptidase activityPFAMPF01080
  • aspartic-type endopeptidase activityPantherPTHR10202
  • PresenilinKOGKOG2736
  • Presenilin-2ATAT2G29900
Glyma05g00400
  • RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)PFAMPF00076
  • RNA-BINDING PROTEINPantherPTHR10432
  • Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily)KOGKOG0121
  • nucleic acid bindingPFAMPF00076
  • RNA-BINDING PROTEINPantherPTHR10432
  • Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily)KOGKOG0121
  • glycine-rich RNA-binding protein 3ATAT5G61030
Glyma05g00411
Glyma05g00420
  • Ferric reductase NAD binding domainPFAMPF08030
  • NADPH OXIDASEPantherPTHR11972
  • Ferric reductase, NADH/NADPH oxidase and related proteinsKOGKOG0039
  • oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptorPFAMPF08414
  • flavin adenine dinucleotide bindingPFAMPF01794
  • FAD-binding domainPFAMPF08022
  • Ferric reductase NAD binding domainPFAMPF08030
  • NADPH OXIDASEPantherPTHR11972
  • Ferric reductase, NADH/NADPH oxidase and related proteinsKOGKOG0039
  • respiratory burst oxidase protein FATAT1G64060
Glyma05g00430
Glyma05g00445
  • heat shock protein bindingPFAMPF00226
  • Zinc-finger double-stranded RNA-bindingPFAMPF12171
  • DNAJ/HSP40PantherPTHR11821
  • U1-like Zn-finger-containing protein, probabl erole in RNA processing/splicingKOGKOG3408
  • DNAJ heat shock N-terminal domain-containing proteinATAT1G74250
Glyma05g00460
  • Histone deacetylase domainPFAMPF00850
  • HISTONE DEACETYLASEPantherPTHR10625
  • Histone deacetylase complex, catalytic component RPD3KOGKOG1342
  • Histone deacetylase domainPFAMPF00850
  • HISTONE DEACETYLASEPantherPTHR10625
  • Histone deacetylase complex, catalytic component RPD3KOGKOG1342
  • histone deacetylaseEC3.5.1.98
  • histone deacetylase 6/10 [EC:3.5.1.98]KOK11407
  • histone deacetylase 5ATAT5G61060
Glyma05g00470
Glyma05g00480
Glyma05g00490
  • Predicted membrane proteinPFAMPF10160
  • Predicted membrane proteinKOGKOG4536
  • Predicted membrane proteinPFAMPF10160
  • Predicted membrane proteinKOGKOG4536
  • Protein of unknown function, transmembrane-40ATAT3G05010
Glyma05g00500
  • Cytochrome P450PFAMPF00067
  • CYTOCHROME P450PantherPTHR19383
  • Cytochrome P450 CYP2 subfamilyKOGKOG0156
  • Activity=flavonoid 3'-monooxygenase; Pathway=luteolin biosynthesisSoyCycPWY-5060
  • Activity=flavonoid 3'-monooxygenase; Pathway=flavonol biosynthesisSoyCycPWY-3101
  • Activity=flavonoid 3'-monooxygenase; Pathway=leucodelphinidin biosynthesisSoyCycPWY-5152
  • Activity=flavonoid 3'-monooxygenase; Pathway=leucopelargonidin and leucocyanidin biosynthesisSoyCycPWY1F-823
  • Activity=flavonoid 3'-monooxygenase; Pathway=leucopelargonidin and leucocyanidin biosynthesisSoyCycPWY1F-823
  • Activity=flavonoid 3'-monooxygenase; Pathway=leucodelphinidin biosynthesisSoyCycPWY-5152
  • Activity=flavonoid 3'-monooxygenase; Pathway=syringetin biosynthesisSoyCycPWY-5391
  • Activity=flavonoid 3'-monooxygenase; Pathway=flavonol biosynthesisSoyCycPWY-3101
  • Activity=flavonoid 3'-monooxygenase; Pathway=luteolin biosynthesisSoyCycPWY-5060
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenPFAMPF00067
  • CYTOCHROME P450PantherPTHR19383
  • Cytochrome P450 CYP2 subfamilyKOGKOG0156
  • Cytochrome P450 superfamily proteinATAT5G07990
Glyma05g00510
  • Cytochrome P450PFAMPF00067
  • CYTOCHROME P450PantherPTHR19383
  • Cytochrome P450 CYP2 subfamilyKOGKOG0156
  • Activity=flavonoid 3'-monooxygenase; Pathway=luteolin biosynthesisSoyCycPWY-5060
  • Activity=flavonoid 3'-monooxygenase; Pathway=flavonol biosynthesisSoyCycPWY-3101
  • Activity=flavonoid 3'-monooxygenase; Pathway=leucodelphinidin biosynthesisSoyCycPWY-5152
  • Activity=flavonoid 3'-monooxygenase; Pathway=leucopelargonidin and leucocyanidin biosynthesisSoyCycPWY1F-823
  • Activity=flavonoid 3'-monooxygenase; Pathway=leucopelargonidin and leucocyanidin biosynthesisSoyCycPWY1F-823
  • Activity=flavonoid 3'-monooxygenase; Pathway=leucodelphinidin biosynthesisSoyCycPWY-5152
  • Activity=flavonoid 3'-monooxygenase; Pathway=syringetin biosynthesisSoyCycPWY-5391
  • Activity=flavonoid 3'-monooxygenase; Pathway=flavonol biosynthesisSoyCycPWY-3101
  • Activity=flavonoid 3'-monooxygenase; Pathway=luteolin biosynthesisSoyCycPWY-5060
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenPFAMPF00067
  • CYTOCHROME P450PantherPTHR19383
  • Cytochrome P450 CYP2 subfamilyKOGKOG0156
  • flavonoid 3'-monooxygenaseEC1.14.13.21
  • flavonoid 3'-monooxygenase [EC:1.14.13.21]KOK05280
  • Cytochrome P450 superfamily proteinATAT5G07990
Glyma05g00521
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenPFAMPF00067
  • CYTOCHROME P450PantherPTHR19383
  • Cytochrome P450 superfamily proteinATAT5G07990
Glyma05g00530
  • Cytochrome P450PFAMPF00067
  • CYTOCHROME P450PantherPTHR19383
  • Cytochrome P450 CYP2 subfamilyKOGKOG0156
  • Activity=flavonoid 3'-monooxygenase; Pathway=luteolin biosynthesisSoyCycPWY-5060
  • Activity=flavonoid 3'-monooxygenase; Pathway=flavonol biosynthesisSoyCycPWY-3101
  • Activity=flavonoid 3'-monooxygenase; Pathway=leucodelphinidin biosynthesisSoyCycPWY-5152
  • Activity=flavonoid 3'-monooxygenase; Pathway=leucopelargonidin and leucocyanidin biosynthesisSoyCycPWY1F-823
  • Activity=flavonoid 3'-monooxygenase; Pathway=leucopelargonidin and leucocyanidin biosynthesisSoyCycPWY1F-823
  • Activity=flavonoid 3'-monooxygenase; Pathway=leucodelphinidin biosynthesisSoyCycPWY-5152
  • Activity=flavonoid 3'-monooxygenase; Pathway=syringetin biosynthesisSoyCycPWY-5391
  • Activity=flavonoid 3'-monooxygenase; Pathway=flavonol biosynthesisSoyCycPWY-3101
  • Activity=flavonoid 3'-monooxygenase; Pathway=luteolin biosynthesisSoyCycPWY-5060
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenPFAMPF00067
  • CYTOCHROME P450PantherPTHR19383
  • Cytochrome P450 CYP2 subfamilyKOGKOG0156
  • Cytochrome P450 superfamily proteinATAT5G07990
Glyma05g00540
  • C-terminal, D2-small domain, of ClpB proteinPFAMPF10431
  • ATP-DEPENDENT CLP PROTEASEPantherPTHR11638
  • Chaperone HSP104 and related ATP-dependent Clp proteasesKOGKOG1051
  • response to hydrogen peroxideGOGO:0042542
  • protein bindingGOGO:0005515
  • protein unfoldingGOGO:0043335
  • response to high light intensityGOGO:0009644
  • ATPase activityGOGO:0016887
  • response to heatGOGO:0009408
  • ATP bindingGOGO:0005524
  • protein metabolic processPFAMPF02861
  • ATP bindingPFAMPF00004
  • ATP bindingPFAMPF07724
  • PFAMPF00158
  • ATPase family associated with various cellular activities (AAA)PFAMPF07728
  • C-terminal, D2-small domain, of ClpB proteinPFAMPF10431
  • ATP-DEPENDENT CLP PROTEASEPantherPTHR11638
  • Chaperone HSP104 and related ATP-dependent Clp proteasesKOGKOG1051
  • heat shock protein 101ATAT1G74310
Glyma05g00550
  • dentin sialophosphoprotein-relatedATAT5G07980
Glyma05g00560
Glyma05g00570
  • Diacylglycerol kinase accessory domainPFAMPF00609
  • DIACYLGLYCEROL KINASEPantherPTHR11255
  • Diacylglycerol kinaseKOGKOG1169
  • Diacylglycerol kinase.EC2.7.1.107
  • E2.7.1.107, DGK, dgkA; diacylglycerol kinase [EC:2.7.1.107 ] [COG:COG0818 ] [GO:0004143 ]KOK00901
  • intracellular signal transductionPFAMPF00130
  • diacylglycerol kinase activityPFAMPF00781
  • diacylglycerol kinase activityPFAMPF00609
  • DIACYLGLYCEROL KINASEPantherPTHR11255
  • Diacylglycerol kinaseKOGKOG1169
  • diacylglycerol kinase (ATP dependent)EC2.7.1.107
  • diacylglycerol kinase [EC:2.7.1.107]KOK00901
  • diacylglycerol kinase1ATAT5G07920
Glyma05g00590
  • UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domainPFAMPF03720
  • UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASEPantherPTHR11374
  • UDP-glucose/GDP-mannose dehydrogenaseKOGKOG2666
  • Activity=UDP-glucose 6-dehydrogenase; Pathway=UDP-sugars interconversionSoyCycPWY-5114
  • Activity=UDP-glucose 6-dehydrogenase; Pathway=galactose degradation IIISoyCycPWY-3821
  • Activity=UDP-glucose 6-dehydrogenase; Pathway=UDP-D-xylose and UDP-D-glucuronate biosynthesisSoyCycPWY-4821
  • Activity=UDP-glucose 6-dehydrogenase; Pathway=colanic acid building blocks biosynthesisSoyCycCOLANSYN-PWY
  • Activity=UDP-glucose 6-dehydrogenase; Pathway=UDP-D-xylose biosynthesisSoyCycPWY-4821
  • Activity=UDP-glucose 6-dehydrogenase; Pathway=UDP-sugars interconversionSoyCycPWY-5114
  • Activity=UDP-glucose 6-dehydrogenase; Pathway=Galactose degradation IISoyCycPWY-3821
  • Activity=UDP-glucose 6-dehydrogenase; Pathway=colanic acid building blocks biosynthesisSoyCycCOLANSYN-PWY
  • NAD bindingPFAMPF03721
  • NAD bindingPFAMPF00984
  • NAD bindingPFAMPF03720
  • UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASEPantherPTHR11374
  • UDP-glucose/GDP-mannose dehydrogenaseKOGKOG2666
  • UDP-glucose 6-dehydrogenase family proteinATAT3G29360
Glyma05g00600
Glyma05g00611
Glyma05g00620
  • Photosystem I reaction centre subunit IIIPFAMPF02507
  • PSAF; photosystem I subunit IIIKOK02694
  • photosystem I reaction centerPFAMPF02507
  • photosystem I subunit IIIKOK02694
  • photosystem I subunit FATAT1G31330
Glyma05g00630
  • gb def: Hypothetical protein F3A4.70 (Hypothetical protein At3g49990/F3A4_70) (At3g49990PantherPTHR21531:SF15
  • Uncharacterized conserved proteinKOGKOG2637
  • gb def: Hypothetical protein F3A4.70 (Hypothetical protein At3g49990/F3A4_70) (At3g49990PantherPTHR21531:SF15
  • Uncharacterized conserved proteinKOGKOG2637
  • ATAT3G49990
  • UNCHARACTERIZEDPantherPTHR21531
Glyma05g00640
  • SNARE domainPFAMPF05739
  • SYNAPTOSOMAL ASSOCIATED PROTEINPantherPTHR19305
  • SNAP-25 (synaptosome-associated protein) component of SNARE complexKOGKOG3065
  • protein bindingPFAMPF05739
  • SYNAPTOSOMAL ASSOCIATED PROTEINPantherPTHR19305
  • SNAP-25 (synaptosome-associated protein) component of SNARE complexKOGKOG3065
  • soluble N-ethylmaleimide-sensitive factor adaptor protein 33ATAT5G61210
Glyma05g00663
Glyma05g00686
Glyma05g00710
  • Plant calmodulin-binding domainPFAMPF07839
  • Plant calmodulin-binding domainPFAMPF07839
  • Plant calmodulin-binding protein-relatedATAT5G39380
Glyma05g00720
  • DIMETHYLANILINE MONOOXYGENASEPantherPTHR23023
  • Flavin-containing monooxygenaseKOGKOG1399
  • Thi4 familyPFAMPF01946
  • Pyridine nucleotide-disulphide oxidoreductasePFAMPF07992
  • HI0933-like proteinPFAMPF03486
  • monooxygenase activityPFAMPF01494
  • oxidoreductase activityPFAMPF01266
  • oxidoreductase activityPFAMPF00890
  • Flavin containing amine oxidoreductasePFAMPF01593
  • flavin-containing monooxygenase activityPFAMPF00743
  • DIMETHYLANILINE MONOOXYGENASEPantherPTHR23023
  • Flavin-binding monooxygenase family proteinATAT5G07800
Glyma05g00730
  • DIMETHYLANILINE MONOOXYGENASEPantherPTHR23023
  • Flavin-containing monooxygenaseKOGKOG1399
  • Thi4 familyPFAMPF01946
  • flavin-containing monooxygenase activityPFAMPF00743
  • Pyridine nucleotide-disulphide oxidoreductasePFAMPF07992
  • HI0933-like proteinPFAMPF03486
  • monooxygenase activityPFAMPF01494
  • oxidoreductase activityPFAMPF01266
  • oxidoreductase activityPFAMPF00890
  • tRNA processingPFAMPF01134
  • Flavin containing amine oxidoreductasePFAMPF01593
  • DIMETHYLANILINE MONOOXYGENASEPantherPTHR23023
  • Flavin-containing monooxygenaseKOGKOG1399
  • Flavin-binding monooxygenase family proteinATAT5G61290






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