Genes Covered By A Chromosome Alteration FN0176028.xx.xx.xx.xx.xx.09.M8.2

Gene Name

Gene Annotation

Glyma18g14390

Vesicle transport v-SNARE protein PFAM PF05008
VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED Panther PTHR21230
Golgi SNAP receptor complex member KOG KOG3251
golgi SNAP receptor complex member 2 KO K08496
Snare region anchored in the vesicle membrane C-terminus PFAM PF12352
VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED Panther PTHR21230
Golgi SNAP receptor complex member KOG KOG3251
golgi SNAP receptor complex member 2 KO K08496
membrin 11 AT AT2G36900

Glyma18g14400

WD domain, G-beta repeat PFAM PF00400
FAMILY NOT NAMED Panther PTHR22838
WD40 repeat-containing protein KOG KOG0293
WD domain, G-beta repeat PFAM PF00400
WD REPEAT PROTEIN 26-RELATED Panther PTHR22838
WD40 repeat-containing protein KOG KOG0293
transducin family protein / WD-40 repeat family protein AT AT5G08560

Glyma18g14410

PsbP PFAM PF01789
PSBP; photosystem II oxygen-evolving complex 23K protein KO K02717
oxygen evolving complex PFAM PF01789
photosystem II oxygen-evolving enhancer protein 2 KO K02717
photosystem II subunit P-1 AT AT1G06680

Glyma18g14426

Tetratricopeptide repeat PFAM PF07719
protein binding PFAM PF00515
CHAPERONE BINDING PROTEIN Panther PTHR22904
peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase AT AT2G15790

Glyma18g14443

GDP dissociation inhibitor PFAM PF00996
RAB GDP-DISSOCIATION INHIBITOR Panther PTHR11787
guanosine nucleotide diphosphate dissociation inhibitor 1 AT AT2G44100

Glyma18g14460

Reticulon PFAM PF02453
RETICULON/NOGO Panther PTHR10994
Reticulon KOG KOG1792
endoplasmic reticulum PFAM PF02453
endoplasmic reticulum Panther PTHR10994
Reticulon KOG KOG1792
Reticulon family protein AT AT3G10260

Glyma18g14490

Glyma18g14501

protein binding PFAM PF00628
NUCLEAR PROTEIN 95 Panther PTHR14140
ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 AT AT5G24330

Glyma18g14510

Aldo/keto reductase family PFAM PF00248
ALDO/KETO REDUCTASE Panther PTHR11732
Voltage-gated shaker-like K+ channel, subunit beta/KCNAB KOG KOG1575
Aldo/keto reductase family PFAM PF00248
oxidoreductase activity Panther PTHR11732
Voltage-gated shaker-like K+ channel, subunit beta/KCNAB KOG KOG1575
NAD(P)-linked oxidoreductase superfamily protein AT AT1G06690

Glyma18g14520

Glyma18g14530

Helix-loop-helix DNA-binding domain PFAM PF00010
CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS Panther PTHR23042
transcription regulator activity PFAM PF00010
BASIC HELIX-LOOP-HELIX/LEUCINE ZIPPER TRANSCRIPTION FACTOR Panther PTHR10014
phytochrome interacting factor 4 AT AT2G43010

Glyma18g14541

PIF1 helicase PFAM PF05970
HELICASE-RELATED Panther PTHR10492
PIF1 helicase AT AT5G28780

Glyma18g14551

DNA binding PFAM PF02892
Protein of unknown function (DUF 659) PFAM PF04937
hAT dimerisation domain-containing protein AT AT3G17450

Glyma18g14560

KOW motif PFAM PF00467
MITOCHONDRIAL RIBOSOMAL PROTEIN L24 Panther PTHR12903
KOW motif PFAM PF00467
intracellular Panther PTHR12903
KOW domain-containing protein AT AT5G23535

Glyma18g14620

Flavin containing amine oxidoreductase PFAM PF01593
AMINE OXIDASE Panther PTHR10742
Amine oxidase KOG KOG0029
Activity=polyamine oxidase; Pathway=beta-alanine biosynthesis I SoyCyc PWY-3981
HI0933-like protein PFAM PF03486
oxidoreductase activity PFAM PF01266
oxidoreductase activity PFAM PF00890
tRNA processing PFAM PF01134
Flavin containing amine oxidoreductase PFAM PF01593
AMINE OXIDASE Panther PTHR10742
Amine oxidase KOG KOG0029
polyamine oxidase 2 AT AT2G43020

Glyma18g14640

Glycosyl hydrolases family 28 PFAM PF00295
polygalacturonase activity PFAM PF00295
Pectin lyase-like superfamily protein AT AT4G23820

Glyma18g14655

apoptosis PFAM PF00931
disease resistance protein (TIR-NBS-LRR class), putative AT AT5G17680

Glyma18g14670

Helicase conserved C-terminal domain PFAM PF00271
DEAD BOX ATP-DEPENDENT RNA HELICASE Panther PTHR10967
ATP-dependent RNA helicase KOG KOG0331
ATP-dependent helicase activity PFAM PF00270
helicase activity PFAM PF00271
DEAD BOX ATP-DEPENDENT RNA HELICASE Panther PTHR10967
ATP-dependent RNA helicase KOG KOG0331
putative mitochondrial RNA helicase 2 AT AT3G22330

Glyma18g14680

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine rich repeat N-terminal domain PFAM PF08263
protein binding PFAM PF00560
Protein tyrosine kinase PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine-rich receptor-like protein kinase family protein AT AT4G20270

Glyma18g14730

Glyma18g14740

AMINOTRANSFERASE CLASS V Panther PTHR21152
Alanine-glyoxylate aminotransferase AGT1 KOG KOG2862
Serine--glyoxylate aminotransferase. EC 2.6.1.45
E2.6.1.45; serine--glyoxylate transaminase [EC:2.6.1.45 ] KO K00828
membrane GO GO:0016020
apoplast GO GO:0048046
chloroplast stroma GO GO:0009570
chloroplast GO GO:0009507
plasma membrane GO GO:0005886
serine-glyoxylate transaminase activity GO GO:0050281
alanine-glyoxylate transaminase activity GO GO:0008453
photorespiration GO GO:0009853
peroxisome GO GO:0005777
protein binding GO GO:0005515
serine-pyruvate transaminase activity GO GO:0004760
Activity=alanine-glyoxylate transaminase; Pathway=glycine biosynthesis III SoyCyc GLYSYN-ALA-PWY
Activity=alanine-glyoxylate transaminase; Pathway=superpathway of alanine biosynthesis SoyCyc PWY0-1061
Activity=alanine-glyoxylate transaminase; Pathway=alanine biosynthesis II SoyCyc ALANINE-SYN2-PWY
Activity=alanine-glyoxylate transaminase; Pathway=Glycine biosynthesis III SoyCyc GLYSYN-ALA-PWY
Activity=alanine-glyoxylate transaminase; Pathway=photorespiration SoyCyc PWY-181
Activity=alanine-glyoxylate transaminase; Pathway=alanine degradation II to D-lactate SoyCyc ALACAT2-PWY
metabolic process PFAM PF00266
AMINOTRANSFERASE CLASS V Panther PTHR21152
Alanine-glyoxylate aminotransferase AGT1 KOG KOG2862
alanineÂ—glyoxylate transaminase EC 2.6.1.44
serineÂ—glyoxylate transaminase EC 2.6.1.45
serineÂ—pyruvate transaminase EC 2.6.1.51
alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] KO K00830
alanine:glyoxylate aminotransferase AT AT2G13360

Glyma18g14750

Basic region leucine zipper PFAM PF07716
FAMILY NOT NAMED Panther PTHR13301
protein dimerization activity PFAM PF00170
Basic region leucine zipper PFAM PF07716
X-BOX TRANSCRIPTION FACTOR-RELATED Panther PTHR13301
Basic-leucine zipper (bZIP) transcription factor family protein AT AT5G11260

Glyma18g14760

Glyma18g14770

MA3 domain PFAM PF02847
CELL CYCLE CONTROL PROTEIN CWF22 Panther PTHR18034
Uncharacterized conserved protein KOG KOG2140
RNA metabolic process PFAM PF02854
MA3 domain PFAM PF02847
CELL CYCLE CONTROL PROTEIN CWF22 Panther PTHR18034
Uncharacterized conserved protein KOG KOG2140
pre-mRNA-splicing factor CWC22 KO K13100
MIF4G domain-containing protein / MA3 domain-containing protein AT AT1G80930

Glyma18g14781

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Pentatricopeptide repeat (PPR) superfamily protein AT AT3G49710

Glyma18g14790

Glyma18g14801

Reactive mitochondrial oxygen species modulator 1 PFAM PF10247
Uncharacterized conserved protein KOG KOG4096
AT AT3G07910

Glyma18g14810

Leucine Rich Repeat PFAM PF00560
innate immune response PFAM PF01582
apoptosis PFAM PF00931
Leucine Rich Repeat PFAM PF07725
Apoptotic ATPase KOG KOG4658
disease resistance protein (TIR-NBS-LRR class), putative AT AT5G17680

Glyma18g14826

PFAM PF05496
ATP binding PFAM PF00004
AAA-FAMILY ATPASE Panther PTHR23077
ATPase, AAA-type, CDC48 protein AT AT5G03340

Glyma18g14843

Protein of unknown function (DUF 659) PFAM PF04937
protein dimerization activity PFAM PF05699
hAT dimerisation domain-containing protein / transposase-related AT AT5G33406

Glyma18g14860

Squalene epoxidase PFAM PF08491
MONOOXYGENASE Panther PTHR13789
Squalene monooxygenase KOG KOG1298
Activity=squalene_epoxidase; Pathway=plant sterol biosynthesis SoyCyc PWY-2541
Activity=squalene_epoxidase; Pathway=cholesterol biosynthesis I SoyCyc PWY66-341
Activity=squalene_epoxidase; Pathway=epoxysqualene biosynthesis SoyCyc PWY-5670
Activity=squalene_epoxidase; Pathway=plant sterol biosynthesis SoyCyc PWY-2541
Activity=squalene_epoxidase; Pathway=cholesterol biosynthesis I SoyCyc PWY66-341
Activity=squalene_epoxidase; Pathway=cholesterol biosynthesis III via desmosterol SoyCyc PWY66-4
Activity=squalene_epoxidase; Pathway=ergosterol biosynthesis SoyCyc ERGOSTEROL-SYN-PWY
Activity=squalene_epoxidase; Pathway=epoxysqualene biosynthesis SoyCyc PWY-5670
Activity=squalene_epoxidase; Pathway=cholesterol biosynthesis II via 24,25-dihydrolanosterol SoyCyc PWY66-3
monooxygenase activity PFAM PF01494
oxidoreductase activity PFAM PF01266
squalene monooxygenase activity PFAM PF08491
MONOOXYGENASE Panther PTHR13789
Squalene monooxygenase KOG KOG1298
FAD/NAD(P)-binding oxidoreductase family protein AT AT1G58440
squalene epoxidase 3 AT AT4G37760

Glyma18g14881

Esterase/lipase/thioesterase family protein AT AT5G41120

Glyma18g14900

AT AT5G12340

Glyma18g14910

Homeobox domain PFAM PF00046
HOMEOBOX PROTEIN Panther PTHR19418
sequence-specific DNA binding PFAM PF00046
HOMEOBOX PROTEIN Panther PTHR19418
Homeodomain-like superfamily protein AT AT4G03250

Glyma18g14921

nucleus PFAM PF02183
Homeobox-leucine zipper protein family AT AT1G69780

Glyma18g14930

ACTIN Panther PTHR11937
Actin PFAM PF00022
ACTIN Panther PTHR11937
Subtilase family protein AT AT4G20430

Glyma18g14941

PIF1 helicase PFAM PF05970
HELICASE-RELATED Panther PTHR10492
PIF1 helicase AT AT3G51690

Glyma18g14951

HELICASE-RELATED Panther PTHR10492

Glyma18g14961

Domain of unknown function DUF223 PFAM PF02721
Replication factor-A C terminal domain PFAM PF08646
Nucleic acid-binding, OB-fold-like protein AT AT1G52950

Glyma18g14970

Disease resistance/zinc finger/chromosome condensation-like region PFAM PF08381
REGULATOR OF CHROMOSOME CONDENSATION Panther PTHR22870
Uncharacterized conserved protein, contains RCC1 domain KOG KOG1427
Regulator of chromosome condensation (RCC1) repeat PFAM PF00415
metal ion binding PFAM PF01363
Disease resistance/zinc finger/chromosome condensation-like region PFAM PF08381
REGULATOR OF CHROMOSOME CONDENSATION Panther PTHR22870
Uncharacterized conserved protein, contains RCC1 domain KOG KOG1427
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain AT AT5G19420

Glyma18g14980

Ribosomal protein L34e PFAM PF01199
60S RIBOSOMAL PROTEIN L34 Panther PTHR10759
60s ribosomal protein L34 KOG KOG1790
RP-L34e, RPL34; large subunit ribosomal protein L34e [GO:0005842 ] KO K02915
intracellular PFAM PF01199
intracellular Panther PTHR10759
60s ribosomal protein L34 KOG KOG1790
large subunit ribosomal protein L34e KO K02915
Ribosomal protein L34e superfamily protein AT AT1G26880

Glyma18g15001

Glyma18g15020

No apical meristem (NAM) protein PFAM PF02365
regulation of transcription, DNA-dependent PFAM PF02365
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein AT AT1G26870

Glyma18g15030

CAAX amino terminal protease family PFAM PF02517
TatD-related deoxyribonuclease KO K07052
membrane PFAM PF02517
TatD-related deoxyribonuclease KO K07052
CAAX amino terminal protease family protein AT AT1G14270

Glyma18g15050

Protein of unknown function (DUF1423) PFAM PF07227
Protein of unknown function (DUF1423) AT AT1G05410

Glyma18g15065

NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE RELATED Panther PTHR19446:SF34
AT AT4G05095

Glyma18g15080

Methyltransferase domain PFAM PF08241
methyltransferase activity PFAM PF03141
Methyltransferase domain PFAM PF08241
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein AT AT1G26850