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Integrating Genetics and Genomics to Advance Soybean Research

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Genes Covered By A Chromosome Alteration FN0173659.04.M3.7

Gene NameGene Annotation
Glyma17g04720
  • Cytidine and deoxycytidylate deaminase zinc-binding regionPFAMPF00383
  • CYTOSINE DEAMINASEPantherPTHR11079
  • Cytosine deaminase FCY1 and related enzymesKOGKOG1018
  • hydrolase activityPFAMPF00383
  • CYTOSINE DEAMINASEPantherPTHR11079
  • Cytosine deaminase FCY1 and related enzymesKOGKOG1018
  • Cytidine/deoxycytidylate deaminase family proteinATAT5G28050
Glyma17g04730
Glyma17g04740
Glyma17g04750
Glyma17g04760
Glyma17g04770
  • PectinacetylesterasePFAMPF03283
  • NOTUM-RELATEDPantherPTHR21562
  • Pectin acetylesterase and similar proteinsKOGKOG4287
  • PectinacetylesterasePFAMPF03283
  • NOTUM-RELATEDPantherPTHR21562
  • Pectin acetylesterase and similar proteinsKOGKOG4287
  • Pectinacetylesterase family proteinATAT5G26670
Glyma17g04780
  • POT familyPFAMPF00854
  • OLIGOPEPTIDE TRANSPORTER-RELATEDPantherPTHR11654
  • H+/oligopeptide symporterKOGKOG1237
  • oligopeptide transportPFAMPF00854
  • OLIGOPEPTIDE TRANSPORTER-RELATEDPantherPTHR11654
  • H+/oligopeptide symporterKOGKOG1237
  • Major facilitator superfamily proteinATAT1G59740
Glyma17g04790
Glyma17g04800
  • Saposin-like type B, region 1PFAMPF05184
  • ASPARTYL PROTEASESPantherPTHR13683
  • Aspartyl proteaseKOGKOG1339
  • aspartic-type endopeptidase activityPFAMPF00026
  • Saposin-like type B, region 2PFAMPF03489
  • lipid metabolic processPFAMPF05184
  • aspartic-type endopeptidase activityPantherPTHR13683
  • Aspartyl proteaseKOGKOG1339
  • aspartic proteinase A1ATAT1G11910
Glyma17g04810
  • Zn-finger in Ran binding protein and othersPFAMPF00641
  • RHOMBOID-RELATEDPantherPTHR22790
  • Rhomboid family proteinsKOGKOG2632
  • serine-type endopeptidase activityPFAMPF01694
  • RHOMBOID-RELATEDPantherPTHR22790
  • Rhomboid family proteinsKOGKOG2632
  • RHOMBOID-like protein 14ATAT3G17611
Glyma17g04820
  • Sodium/hydrogen exchanger familyPFAMPF00999
  • SUBFAMILY NOT NAMEDPantherPTHR16254:SF4
  • Predicted K+/H+-antiporterKOGKOG1650
  • cation transportPFAMPF00999
  • Predicted K+/H+-antiporterKOGKOG1650
  • cation/H+ exchanger 19ATAT3G17630
Glyma17g04830
  • TRANSMEMBRANE PROTEIN 14, 15PantherPTHR12668
  • Transmembrane proteins 14CPFAMPF03647
  • Predicted membrane proteinKOGKOG4267
  • membranePFAMPF03647
  • membranePantherPTHR12668
  • Predicted membrane proteinKOGKOG4267
  • Transmembrane proteins 14CATAT3G43520
Glyma17g04840
Glyma17g04850
Glyma17g04870
Glyma17g04880
  • Zinc finger, C3HC4 type (RING finger)PFAMPF00097
  • RING FINGER PROTEIN 24-RELATEDPantherPTHR22766
  • Zinc finger, C3HC4 type (RING finger)PFAMPF00097
  • RING FINGER PROTEIN 11 (SID 1669) (NEDD4 WW DOMAIN-BINDING PROTEIN 2).PantherPTHR22764
  • RING/U-box superfamily proteinATAT5G20885
Glyma17g04890
  • HEAT repeatPFAMPF02985
  • GUANYL-NUCLEOTIDE EXCHANGE FACTORPantherPTHR10663
  • Guanine nucleotide exchange factorKOGKOG0929
  • ARF guanyl-nucleotide exchange factor activityPFAMPF01369
  • Domain of unknown function (DUF1981)PFAMPF09324
  • GUANYL-NUCLEOTIDE EXCHANGE FACTORPantherPTHR10663
  • Guanine nucleotide exchange factorKOGKOG0929
  • guanine nucleotide-exchange factorKOK13462
  • HOPM interactor 7ATAT3G43300
Glyma17g04900
  • X8 domainPFAMPF07983
  • hydrolase activity, hydrolyzing O-glycosyl compoundsPFAMPF00332
  • X8 domainPFAMPF07983
  • O-Glycosyl hydrolases family 17 proteinATAT5G20870
Glyma17g04911
  • phosphatase activityPFAMPF06941
  • protein bindingPFAMPF03031
  • Haloacid dehalogenase-like hydrolase (HAD) superfamily proteinATAT4G33140
Glyma17g04920
  • Saccharopine dehydrogenasePFAMPF03435
  • SACCHAROPINE DEHYDROGENASEPantherPTHR11133
  • Lysine-ketoglutarate reductase/saccharopine dehydrogenaseKOGKOG0172
  • Saccharopine dehydrogenase (NAD+, L-lysine forming).EC1.5.1.7
  • E1.5.1.7; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7 ] [GO:0004754 ]KOK00290
  • Saccharopine dehydrogenase (NADP+, L-lysine forming).EC1.5.1.8
  • Saccharopine dehydrogenase (NAD+, L-glutamate forming).EC1.5.1.9
  • E1.5.1.8; saccharopine dehydrogenase (NADP+, L-lysine forming) [EC:1.5.1.8 ] [GO:0047130 ]KOK00291
  • E1.5.1.9; saccharopine dehydrogenase (NAD+, L-glutamate forming) [EC:1.5.1.9 ] [GO:0047131 ]KOK00292
  • Activity=saccharopine dehydrogenase (NADP+, L-lysine-forming) activity, saccharopine dehydrogenase; Pathway=lysine degradation IISoyCycLYSINE-DEG2-PWY
  • Activity=saccharopine dehydrogenase NADP+, L-lysine-forming activity; Pathway=lysine degradation IISoyCycLYSINE-DEG1-PWY
  • oxidoreductase activityPFAMPF05222
  • oxidoreductase activityPFAMPF01262
  • LOR/SDH bifunctional enzyme conserved regionPFAMPF04455
  • Saccharopine dehydrogenasePFAMPF03435
  • SACCHAROPINE DEHYDROGENASEPantherPTHR11133
  • Lysine-ketoglutarate reductase/saccharopine dehydrogenaseKOGKOG0172
  • lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzymeATAT4G33150
Glyma17g04930
  • O-SIALOGLYCOPROTEIN ENDOPEPTIDASEPantherPTHR12209
  • Serine/threonine protein kinaseKOGKOG3087
  • non-specific serine/threonine protein kinaseEC2.7.11.1
  • TP53 regulating kinase [EC:2.7.11.1]KOK08851
  • Protein tyrosine kinasePFAMPF07714
  • protein phosphorylationPFAMPF00069
  • catalytic activityPFAMPF01163
  • PFAMPF06293
  • O-SIALOGLYCOPROTEIN ENDOPEPTIDASEPantherPTHR12209
  • Serine/threonine protein kinaseKOGKOG3087
  • non-specific serine/threonine protein kinaseEC2.7.11.1
  • TP53 regulating kinase [EC:2.7.11.1]KOK08851
  • Protein kinase superfamily proteinATAT5G26110
  • PFAMPF02958
Glyma17g04940
  • PectinesterasePFAMPF01095
  • Activity=pectinesterase; Pathway=homogalacturonan degradationSoyCycPWY-1081
  • Activity=pectinesterase; Pathway=homogalacturonan degradationSoyCycPWY-1081
  • pectinesterase activityPFAMPF04043
  • cell wall modificationPFAMPF01095
  • pectinesteraseEC3.1.1.11
  • pectinesterase [EC:3.1.1.11]KOK01051
  • Plant invertase/pectin methylesterase inhibitor superfamilyATAT3G43270
Glyma17g04950
  • PectinesterasePFAMPF01095
  • pectinesterase activityPFAMPF04043
  • cell wall modificationPFAMPF01095
  • Plant invertase/pectin methylesterase inhibitor superfamilyATAT2G26440
Glyma17g04960
  • PectinesterasePFAMPF01095
  • Activity=pectinesterase; Pathway=homogalacturonan degradationSoyCycPWY-1081
  • Activity=pectinesterase; Pathway=homogalacturonan degradationSoyCycPWY-1081
  • pectinesterase activityPFAMPF04043
  • cell wall modificationPFAMPF01095
  • Plant invertase/pectin methylesterase inhibitor superfamilyATAT2G26450
Glyma17g04965
Glyma17g04970
  • Plant invertase/pectin methylesterase inhibitorPFAMPF04043
  • METHYLESTERASE INHIBITOR-RELATEDPantherPTHR22931:SF5
  • pectinesterase activityPFAMPF04043
  • METHYLESTERASE INHIBITOR-RELATEDPantherPTHR22931:SF5
  • Plant invertase/pectin methylesterase inhibitor superfamily proteinATAT4G02250
Glyma17g04980
Glyma17g04990
  • Sec34-like familyPFAMPF04136
  • FAMILY NOT NAMEDPantherPTHR13302
  • Subunit of cis-Golgi transport vesicle tethering complex - Sec34pKOGKOG2604
  • intracellular protein transportPFAMPF04136
  • intracellular protein transportPantherPTHR13302
  • Subunit of cis-Golgi transport vesicle tethering complex - Sec34pKOGKOG2604
  • sec34-like family proteinATAT1G73430
Glyma17g05000
  • Phosphatidylinositol-4-phosphate 5-KinasePFAMPF01504
  • PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASEPantherPTHR23086
  • Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteinsKOGKOG0230
  • metal ion bindingPFAMPF01363
  • cellular protein metabolic processPFAMPF00118
  • phosphatidylinositol phosphate kinase activityPFAMPF01504
  • PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASEPantherPTHR23086
  • Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteinsKOGKOG0230
  • 1-phosphatidylinositol-3-phosphate 5-kinaseEC2.7.1.150
  • 1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150]KOK00921
  • phosphatidylinositol-4-phosphate 5-kinase family proteinATAT3G14270
  • cellular protein metabolic processPantherPTHR11353
Glyma17g05010
  • Family of unknown function (DUF500)PFAMPF04366
  • SH3YL1 PROTEINPantherPTHR15629
  • Uncharacterized conserved proteinKOGKOG1843
  • metal ion bindingPFAMPF01363
  • Family of unknown function (DUF500)PFAMPF04366
  • SH3YL1 PROTEINPantherPTHR15629
  • Uncharacterized conserved proteinKOGKOG1843
  • RING/FYVE/PHD-type zinc finger family proteinATAT3G43230
Glyma17g05020
  • SacI homology domainPFAMPF02383
  • INOSITOL 5-PHOSPHATASEPantherPTHR11200
  • Putative phosphoinositide phosphataseKOGKOG1888
  • phosphoric ester hydrolase activityPFAMPF02383
  • INOSITOL 5-PHOSPHATASEPantherPTHR11200
  • Putative phosphoinositide phosphataseKOGKOG1888
  • Phosphoinositide phosphatase family proteinATAT5G20840
Glyma17g05030
  • SAC3/GANP/Nin1/mts3/eIF-3 p25 familyPFAMPF03399
  • FAMILY NOT NAMEDPantherPTHR13022
  • Uncharacterized conserved proteinKOGKOG3252
  • SAC3/GANP/Nin1/mts3/eIF-3 p25 familyPFAMPF03399
  • COP9 signalosome, subunit CSN8PFAMPF10075
  • translation initiation factor activityPantherPTHR13022
  • Uncharacterized conserved proteinKOGKOG3252
  • eukaryotic translation initiation factor 3KATAT4G33250
Glyma17g05042
  • microtubule motor activityPFAMPF00225
  • Domain of unknown function (DUF3490)PFAMPF11995
  • KINESIN HEAVY CHAINPantherPTHR16012
  • ATP binding microtubule motor family proteinATAT2G21300
Glyma17g05054
  • TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATEDPantherPTHR11088:SF2
  • isopentenyltransferase 5ATAT5G19040
Glyma17g05067
Glyma17g05080
  • CAAX amino terminal protease familyPFAMPF02517
  • YHET-RELATED ALPHA/BETA HYDROLASE DOMAIN CONTAININGPantherPTHR10794
  • Alpha/beta hydrolaseKOGKOG1838
  • TatD-related deoxyribonucleaseKOK07052
  • membranePFAMPF02517
  • YHET-RELATED ALPHA/BETA HYDROLASE DOMAIN CONTAININGPantherPTHR10794
  • Alpha/beta hydrolaseKOGKOG1838
  • TatD-related deoxyribonucleaseKOK07052
  • alpha/beta-Hydrolases superfamily proteinATAT2G03140
Glyma17g05093
  • Auxin responsive proteinPFAMPF02519
  • SAUR-like auxin-responsive protein family ATAT1G72430
Glyma17g05106
Glyma17g05120
  • Auxin responsive proteinPFAMPF02519
  • Auxin responsive proteinPFAMPF02519
  • SAUR family proteinKOK14488
  • SAUR-like auxin-responsive protein family ATAT3G43120
Glyma17g05130
  • 2Fe-2S iron-sulfur cluster binding domainPFAMPF00111
  • FERREDOXIN/ADRENODOXINPantherPTHR23426
  • FerredoxinKOGKOG3309
  • iron-sulfur cluster bindingPFAMPF00111
  • FERREDOXIN/ADRENODOXINPantherPTHR23426
  • FerredoxinKOGKOG3309
  • MITOCHONDRIAL FERREDOXIN 2ATAT4G21090
Glyma17g05141
Glyma17g05150
  • AhpC/TSA familyPFAMPF00578
  • PEROXIREDOXINPantherPTHR10681
  • Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymesKOGKOG0855
  • peroxiredoxinEC1.11.1.15
  • peroxiredoxin Q/BCP [EC:1.11.1.15]KOK03564
  • oxidoreductase activityPFAMPF08534
  • antioxidant activityPFAMPF00578
  • PEROXIREDOXINPantherPTHR10681
  • Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymesKOGKOG0855
  • peroxiredoxinEC1.11.1.15
  • peroxiredoxin Q/BCP [EC:1.11.1.15]KOK03564
  • Thioredoxin superfamily proteinATAT3G26060
Glyma17g05160
  • DIMETHYLANILINE MONOOXYGENASEPantherPTHR23023
  • Flavin-containing monooxygenaseKOGKOG1399
  • flavin-containing monooxygenase activityPFAMPF00743
  • Pyridine nucleotide-disulphide oxidoreductasePFAMPF07992
  • DIMETHYLANILINE MONOOXYGENASEPantherPTHR23023
  • Flavin-containing monooxygenaseKOGKOG1399
  • flavin-dependent monooxygenase 1ATAT1G19250
Glyma17g05170
Glyma17g05180
  • Plant invertase/pectin methylesterase inhibitorPFAMPF04043
  • pectinesterase activityPFAMPF04043
  • Plant invertase/pectin methylesterase inhibitor superfamily proteinATAT5G20740
Glyma17g05190
  • NUC173 domainPFAMPF08161
  • UNCHARACTERIZED NODULIN-LIKE PROTEINPantherPTHR21576
  • Uncharacterized conserved proteinKOGKOG1248
  • NUC173 domainPFAMPF08161
  • UNCHARACTERIZED NODULIN-LIKE PROTEINPantherPTHR21576
  • Uncharacterized conserved proteinKOGKOG1248
  • ARM repeat superfamily proteinATAT2G34357
Glyma17g05200
  • Beta-ketoacyl synthase, C-terminal domainPFAMPF02801
  • POLYKETIDE SYNTHASE-RELATEDPantherPTHR11712
  • 3-oxoacyl-(acyl-carrier-protein) synthase (I and II)KOGKOG1394
  • Activity=3-oxoacyl-[acyl-carrier-protein] synthase; Pathway=fatty acid elongation -- saturatedSoyCycFASYN-ELONG-PWY
  • Activity=3-oxoacyl-[acyl-carrier-protein] synthase; Pathway=superpathway of fatty acid biosynthesis II (plant)SoyCycPWY-5156
  • Activity=3-oxoacyl-[acyl-carrier-protein] synthase; Pathway=palmitate biosynthesis II (bacteria and plants)SoyCycPWY-5971
  • Activity=3-oxoacyl-[acyl-carrier-protein] synthase; Pathway=stearate biosynthesis II (plants)SoyCycPWY-5989
  • Activity=3-oxoacyl-[acyl-carrier-protein] synthase; Pathway=superpathway of fatty acid biosynthesis I E. coliSoyCycPWY0-881
  • Activity=3-oxoacyl-[acyl-carrier-protein] synthase; Pathway=stearate biosynthesis II plantsSoyCycPWY-5989
  • Activity=3-oxoacyl-[acyl-carrier-protein] synthase; Pathway=fatty acid elongation -- saturatedSoyCycFASYN-ELONG-PWY
  • Activity=3-oxoacyl-[acyl-carrier-protein] synthase; Pathway=superpathway of fatty acid biosynthesis initiation E. coliSoyCycFASYN-INITIAL-PWY
  • Activity=3-oxoacyl-[acyl-carrier-protein] synthase; Pathway=palmitate biosynthesis II bacteria and plantsSoyCycPWY-5971
  • Activity=3-oxoacyl-[acyl-carrier-protein] synthase; Pathway=superpathway of fatty acid biosynthesis II plantSoyCycPWY-5156
  • Beta-ketoacyl synthase, N-terminal domainPFAMPF00109
  • Beta-ketoacyl synthase, C-terminal domainPFAMPF02801
  • biosynthetic processPantherPTHR11712
  • 3-oxoacyl-(acyl-carrier-protein) synthase (I and II)KOGKOG1394
  • fatty acid biosynthesis 1ATAT1G74960
  • β-ketoacyl-acyl-carrier-protein synthase IIEC2.3.1.179
  • 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]KOK09458
Glyma17g05220
  • Auxin response factorPFAMPF06507
  • regulation of transcription, DNA-dependentPFAMPF02362
  • response to hormone stimulusPFAMPF06507
  • nucleusPFAMPF02309
  • Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-relatedATAT5G20730
Glyma17g05230
  • Chaperonin 10 Kd subunitPFAMPF00166
  • GROES CHAPERONINPantherPTHR10772
  • Mitochondrial chaperoninKOGKOG1641
  • protein foldingPFAMPF00166
  • protein foldingPantherPTHR10772
  • Mitochondrial chaperoninKOGKOG1641
  • chaperonin 20ATAT5G20720






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