Genes Covered By A Chromosome Alteration FN0173217.02.M3.1

Gene Name

Gene Annotation

Glyma06g25310

Methyl-CpG binding domain PFAM PF01429
nucleus PFAM PF01429
methyl-CPG-binding domain 10 AT AT1G15340

Glyma06g25331

nucleoporin-related AT AT5G20200

Glyma06g25350

nucleoporin-related AT AT5G20200

Glyma06g25380

nucleoporin-related AT AT5G20200

Glyma06g25390

NB-ARC domain-containing disease resistance protein AT AT1G50180

Glyma06g25480

Gamma interferon inducible lysosomal thiol reductase (GILT) PFAM PF03227
GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE (GILT)-RELATED Panther PTHR13234
Gamma-interferon inducible lysosomal thiol reductase KOG KOG3160
Thioredoxin superfamily protein AT AT1G07080

Glyma06g25570

Putative serine esterase (DUF676) PFAM PF05057
UNCHARACTERIZED Panther PTHR12482
Predicted alpha/beta hydrolase KOG KOG4372
alpha/beta-Hydrolases superfamily protein AT AT4G25770

Glyma06g25660

CARBAMOYLTRANSFERASE RELATED Panther PTHR11405
carbamoyl-phosphate synthase activity PFAM PF00988
CARBAMOYLTRANSFERASE RELATED Panther PTHR11405
carbamoyl phosphate synthetase A AT AT3G27740

Glyma06g25670

CENTAURIN/ARF Panther PTHR23180
CENTAURIN/ARF Panther PTHR23180
Calcium-dependent ARF-type GTPase activating protein family AT AT4G21160

Glyma06g25880

Inositol monophosphatase family PFAM PF00459
INOSITOL MONOPHOSPHATASE Panther PTHR20854
Inositol monophosphatase KOG KOG2951
inositol or phosphatidylinositol phosphatase activity PFAM PF00459
inositol or phosphatidylinositol phosphatase activity Panther PTHR20854
Inositol monophosphatase KOG KOG2951
inositol-phosphate phosphatase EC 3.1.3.25
myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] KO K01092
myo-inositol monophosphatase like 1 AT AT1G31190

Glyma06g25890

Glyma06g25900

SOLUTE CARRIER FAMILY 35 Panther PTHR11132
Nucleotide-sugar transporter VRG4/SQV-7 KOG KOG1444
Triose-phosphate Transporter family PFAM PF03151
SOLUTE CARRIER FAMILY 35 Panther PTHR11132
Nucleotide-sugar transporter VRG4/SQV-7 KOG KOG1444
Nucleotide/sugar transporter family protein AT AT4G32272

Glyma06g26017

Glyma06g26134

Glyma06g26252

PDI-like 1-2 AT AT1G77510

Glyma06g26370

phloem protein 2-A9 AT AT1G31200

Glyma06g26590

Actin PFAM PF00022
ACTIN Panther PTHR11937
Actin-related protein - Arp6p KOG KOG0680
Actin PFAM PF00022
ACTIN Panther PTHR11937
Actin-related protein - Arp6p KOG KOG0680
actin-related protein 6 AT AT3G33520

Glyma06g26601

AT AT3G24150

Glyma06g26610

Plastocyanin-like domain PFAM PF02298
electron carrier activity PFAM PF02298
blue-copper-binding protein AT AT5G20230

Glyma06g26810

Reticulon PFAM PF02453
RETICULON/NOGO Panther PTHR10994
Reticulon KOG KOG1792
endoplasmic reticulum PFAM PF02453
endoplasmic reticulum Panther PTHR10994
Reticulon family protein AT AT5G58000

Glyma06g27230

Protein kinase domain PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
protein binding PFAM PF00560
Protein tyrosine kinase PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine-rich repeat protein kinase family protein AT AT2G24230

Glyma06g27240

Triose-phosphate Transporter family PFAM PF03151
Predicted UDP-galactose transporter KOG KOG2234
membrane PFAM PF00892
transmembrane transport PFAM PF08449
Triose-phosphate Transporter family PFAM PF03151
purine permease 5 AT AT2G24220

Glyma06g27440

WRKY DNA -binding domain PFAM PF03106
sequence-specific DNA binding PFAM PF03106
WRKY DNA-binding protein 32 AT AT4G30935

Glyma06g27640

Methyladenine glycosylase PFAM PF03352
DNA-3-methyladenine glycosylase I. EC 3.2.2.20
E3.2.2.20, tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20 ] [COG:COG2818 ] [GO:0008725 ] KO K01246
DNA-3-methyladenine glycosylase I activity PFAM PF03352
DNA-3-methyladenine glycosylase I EC 3.2.2.20
DNA-3-methyladenine glycosylase I [EC:3.2.2.20] KO K01246
DNA glycosylase superfamily protein AT AT5G57970

Glyma06g27651

Glyma06g27660

26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9 Panther PTHR12651
26S proteasome regulatory complex, subunit PSMD9 KOG KOG3129
PSMD9; 26S proteasome non-ATPase regulatory subunit 9 KO K06693
26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9 Panther PTHR12651
26S proteasome regulatory complex, subunit PSMD9 KOG KOG3129
26S proteasome non-ATPase regulatory subunit 9 KO K06693
26S proteasome regulatory subunit, putative AT AT5G57950

Glyma06g27770

Protein of unknown function (DUF 659) PFAM PF04937
protein dimerization activity PFAM PF05699
hAT dimerisation domain-containing protein / transposase-related AT AT5G33406

Glyma06g27880

26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9 Panther PTHR12651
26S proteasome regulatory complex, subunit PSMD9 KOG KOG3129
PSMD9; 26S proteasome non-ATPase regulatory subunit 9 KO K06693
26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9 Panther PTHR12651
26S proteasome regulatory complex, subunit PSMD9 KOG KOG3129
26S proteasome non-ATPase regulatory subunit 9 KO K06693
26S proteasome regulatory subunit, putative AT AT5G57950

Glyma06g28090

Endomembrane protein 70 PFAM PF02990
TRANSMEMBRANE 9 SUPERFAMILY PROTEIN MEMBER Panther PTHR10766
Endosomal membrane proteins, EMP70 KOG KOG1278
plasma membrane GO GO:0005886
Golgi apparatus GO GO:0005794
integral to membrane GO GO:0016021
endomembrane system GO GO:0012505
integral to membrane PFAM PF02990
integral to membrane Panther PTHR10766
Endosomal membrane proteins, EMP70 KOG KOG1278
Endomembrane protein 70 protein family AT AT2G24170

Glyma06g28100

GLYCOSIDE HYDROLASES Panther PTHR10353
hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF00232
hydrolase activity, hydrolyzing O-glycosyl compounds Panther PTHR10353
beta glucosidase 17 AT AT2G44480

Glyma06g28331

acyltransferase activity PFAM PF01553
1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE Panther PTHR10434
1-acyl-sn-glycerol-3-phosphate acyltransferase KOG KOG2848
1-acylglycerol-3-phosphate O-acyltransferase EC 2.3.1.51
1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] KO K00655
Phospholipid/glycerol acyltransferase family protein AT AT4G30580

Glyma06g28560

Arabidopsis thaliana protein of unknown function (DUF794) PFAM PF05634
TRANSLATION FACTOR SUI1 Panther PTHR10388
Arabidopsis thaliana protein of unknown function (DUF794) PFAM PF05634
TRANSLATION FACTOR SUI1 Panther PTHR10388
Arabidopsis thaliana protein of unknown function (DUF794) AT AT5G57930

Glyma06g28570

SRP54-type protein, GTPase domain PFAM PF00448
GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS Panther PTHR11564
Signal recognition particle receptor, alpha subunit KOG KOG0781
SRPR, ftsY; signal recognition particle receptor [COG:COG0552 ] KO K03110
signal recognition particle binding PFAM PF04086
SRP-dependent cotranslational protein targeting to membrane PFAM PF02881
SRP-dependent cotranslational protein targeting to membrane PFAM PF00448
GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS Panther PTHR11564
Signal recognition particle receptor, alpha subunit KOG KOG0781
signal recognition particle receptor subunit alpha KO K13431
signal recognition particle receptor alpha subunit family protein AT AT4G30600

Glyma06g28580

Glyma06g28605

Glyma06g28630

ENDO-1,4-BETA-GLUCANASE Panther PTHR22298
hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF00759
ENDO-1,4-BETA-GLUCANASE Panther PTHR22298
glycosyl hydrolase 9B7 AT AT1G75680

Glyma06g28650

Plastocyanin-like domain PFAM PF02298
electron carrier activity PFAM PF02298
blue-copper-binding protein AT AT5G20230

Glyma06g28890

Peroxidase PFAM PF00141
Peroxidase. EC 1.11.1.7
E1.11.1.7; peroxidase [EC:1.11.1.7 ] [GO:0004601 ] KO K00430
peroxidase activity PFAM PF00141
peroxidase EC 1.11.1.7
peroxidase [EC:1.11.1.7] KO K00430
Peroxidase superfamily protein AT AT2G41480

Glyma06g29110

AP2 domain PFAM PF00847
sequence-specific DNA binding transcription factor activity PFAM PF00847
Integrase-type DNA-binding superfamily protein AT AT1G15360

Glyma06g29530

HEME OXYGENASE Panther PTHR10720
Heme oxygenase KOG KOG4480
Activity=heme oxygenase (decyclizing); Pathway=heme degradation SoyCyc PWY-5874
Activity=heme oxygenase decyclizing; Pathway=heme degradation SoyCyc PWY-5874
heme oxidation PFAM PF01126
heme oxidation Panther PTHR10720
Heme oxygenase KOG KOG4480
Plant haem oxygenase (decyclizing) family protein AT AT2G26670

Glyma06g29540

DnaJ/Hsp40 cysteine-rich domain superfamily protein AT AT3G47650

Glyma06g29565

Protein of unknown function (DUF3414) PFAM PF11894
Uncharacterized conserved protein KOG KOG1835
nuclear pore complex protein Nup205 KO K14310
Protein of unknown function (DUF3414) AT AT5G51200

Glyma06g29591

Protein of unknown function (DUF 659) PFAM PF04937
protein dimerization activity PFAM PF05699
hAT dimerisation domain-containing protein / transposase-related AT AT5G33406

Glyma06g29615

nucleic acid binding PFAM PF00076
RNA RECOGNITION MOTIF-CONTAINING Panther PTHR23189
RNA-binding (RRM/RBD/RNP motifs) family protein AT AT4G35785

Glyma06g29640

Transmembrane amino acid transporter protein PFAM PF01490
AMINO ACID TRANSPORTER Panther PTHR22950
Amino acid transporter protein KOG KOG1305
Transmembrane amino acid transporter protein PFAM PF01490
Tryptophan/tyrosine permease family PFAM PF03222
AMINO ACID TRANSPORTER Panther PTHR22950
Amino acid transporter protein KOG KOG1305
Transmembrane amino acid transporter family protein AT AT3G30390

Glyma06g29663

oxidoreductase activity PFAM PF00107
oxidoreductase activity Panther PTHR11695
Predicted NAD-dependent oxidoreductase KOG KOG1196
Zinc-binding dehydrogenase family protein AT AT3G03080

Glyma06g29686

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT5G66520

Glyma06g29710

Core-2/I-Branching enzyme PFAM PF02485
GLYCOSYLTRANSFERASE 14 FAMILY MEMBER Panther PTHR19297
Branching enzyme KOG KOG0799
membrane PFAM PF02485
GLYCOSYLTRANSFERASE 14 FAMILY MEMBER Panther PTHR19297
Branching enzyme KOG KOG0799
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein AT AT5G15050

Glyma06g29760

Glyma06g29790

Protein of unknown function, DUF594 PFAM PF04578
Protein of unknown function, DUF594 PFAM PF04578
Protein of unknown function (DUF594) AT AT5G45470

Glyma06g29832

MULE transposase domain PFAM PF10551
FAR1-related sequence 5 AT AT4G38180

Glyma06g29874

phospholipid binding PFAM PF07651
CLATHRIN ASSEMBLY PROTEIN Panther PTHR22951
Clathrin assembly protein AP180 and related proteins, contain ENTH domain KOG KOG0251
ENTH/ANTH/VHS superfamily protein AT AT5G35200

Glyma06g29917

helicase activity PFAM PF00271
DEAD BOX ATP-DEPENDENT RNA HELICASE Panther PTHR10967
P-loop containing nucleoside triphosphate hydrolases superfamily protein AT AT3G16840

Glyma06g29960

SET domain PFAM PF00856
SET DOMAIN PROTEINS Panther PTHR22884
protein binding PFAM PF00856
SET DOMAIN PROTEINS Panther PTHR22884
Transcription factor NSD1 and related SET domain proteins KOG KOG1081
SET domain group 4 AT AT4G30860

Glyma06g29980

AT AT2G24100

Glyma06g30000

Ataxin-2 C-terminal region PFAM PF07145
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT (EIF-3) Panther PTHR12601
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT (EIF-3) Panther PTHR12601
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT4G28080

Glyma06g30010

Haemolysin-III related PFAM PF03006
ADIPOR/PROGESTIN RECEPTOR-RELATED Panther PTHR20855
Predicted membrane proteins, contain hemolysin III domain KOG KOG0748
integral to membrane PFAM PF03006
integral to membrane Panther PTHR20855
Predicted membrane proteins, contain hemolysin III domain KOG KOG0748
heptahelical transmembrane protein2 AT AT4G30850

Glyma06g30020

eubacterial secY protein PFAM PF00344
SECY/SEC61-ALPHA FAMILY MEMBER Panther PTHR10906
protein transport protein SEC61 subunit alpha KO K10956
chloroplast GO GO:0009507
thylakoid membrane organization GO GO:0010027
membrane GO GO:0016020
P-P-bond-hydrolysis-driven protein transmembrane transporter activity GO GO:0015450
protein binding GO GO:0005515
protein secretion GO GO:0009306
protein transport PFAM PF00344
protein transport Panther PTHR10906
protein transport protein SEC61 subunit alpha KO K10956
SECY homolog 1 AT AT2G18710

Glyma06g30030

Cyclic nucleotide-binding domain PFAM PF00027
VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL Panther PTHR10217
K+-channel ERG and related proteins, contain PAS/PAC sensor domain KOG KOG0498
CNGF; cyclic nucleotide gated channel, other eukaryote KO K05391
ion transport PFAM PF00520
Cyclic nucleotide-binding domain PFAM PF00027
VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL Panther PTHR10217
K+-channel ERG and related proteins, contain PAS/PAC sensor domain KOG KOG0498
cyclic nucleotide gated channel, other eukaryote KO K05391
cyclic nucleotide-gated channel 17 AT AT4G30360

Glyma06g30185

diacylglycerol kinase activity PFAM PF00781
diacylglycerol kinase activity PFAM PF00609
DIACYLGLYCEROL KINASE Panther PTHR11255
diacylglycerol kinase 7 AT AT4G30340
diacylglycerol kinase 4 AT AT5G57690

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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