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Integrating Genetics and Genomics to Advance Soybean Research

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Genes Covered By A Chromosome Alteration FN0172932.xx.xx.xx.xx.xx.04.M8.1

Gene NameGene Annotation
Glyma02g42410
  • C2 domainPFAMPF00168
  • PHOSPHOLIPASE C-RELATEDPantherPTHR10336
  • Phosphoinositide-specific phospholipase CKOGKOG0169
  • Activity=phosphoinositide phospholipase C; Pathway=D-myo-inositol (1,4,5)-trisphosphate biosynthesisSoyCycPWY-6351
  • Activity=phosphoinositide phospholipase C; Pathway=phospholipasesSoyCycLIPASYN-PWY
  • Activity=phosphoinositide phospholipase C; Pathway=phospholipasesSoyCycLIPASYN-PWY
  • Phosphoinositide-specific phospholipase C, efhand-likePFAMPF09279
  • phospholipase C activityPFAMPF00388
  • phosphatidylinositol phospholipase C activityPFAMPF00387
  • protein bindingPFAMPF00168
  • PHOSPHOLIPASE C-RELATEDPantherPTHR10336
  • Phosphoinositide-specific phospholipase CKOGKOG0169
  • Phosphoinositide-specific phospholipase C family proteinATAT2G40116
Glyma02g42420
  • C2 domainPFAMPF00168
  • PHOSPHOLIPASE C-RELATEDPantherPTHR10336
  • Phosphoinositide-specific phospholipase CKOGKOG0169
  • Activity=phosphoinositide phospholipase C; Pathway=D-myo-inositol (1,4,5)-trisphosphate biosynthesisSoyCycPWY-6351
  • Activity=phosphoinositide phospholipase C; Pathway=phospholipasesSoyCycLIPASYN-PWY
  • Activity=phosphoinositide phospholipase C; Pathway=phospholipasesSoyCycLIPASYN-PWY
  • Phosphoinositide-specific phospholipase C, efhand-likePFAMPF09279
  • phospholipase C activityPFAMPF00388
  • phosphatidylinositol phospholipase C activityPFAMPF00387
  • protein bindingPFAMPF00168
  • PHOSPHOLIPASE C-RELATEDPantherPTHR10336
  • Phosphoinositide-specific phospholipase CKOGKOG0169
  • Phosphoinositide-specific phospholipase C family proteinATAT2G40116
Glyma02g42430
  • C2 domainPFAMPF00168
  • PHOSPHOLIPASE C-RELATEDPantherPTHR10336
  • Phosphoinositide-specific phospholipase CKOGKOG0169
  • Activity=phosphoinositide phospholipase C; Pathway=D-myo-inositol (1,4,5)-trisphosphate biosynthesisSoyCycPWY-6351
  • Activity=phosphoinositide phospholipase C; Pathway=phospholipasesSoyCycLIPASYN-PWY
  • Activity=phosphoinositide phospholipase C; Pathway=phospholipasesSoyCycLIPASYN-PWY
  • Phosphoinositide-specific phospholipase C, efhand-likePFAMPF09279
  • phospholipase C activityPFAMPF00388
  • phosphatidylinositol phospholipase C activityPFAMPF00387
  • protein bindingPFAMPF00168
  • PHOSPHOLIPASE C-RELATEDPantherPTHR10336
  • Phosphoinositide-specific phospholipase CKOGKOG0169
  • phosphoinositide phospholipase CEC3.1.4.11
  • phospholipase C, delta [EC:3.1.4.11]KOK05857
  • phospholipase C 2ATAT3G08510
Glyma02g42440
  • Protein tyrosine kinasePFAMPF07714
  • SERINE-THREONINE PROTEIN KINASE, PLANT-TYPEPantherPTHR23258
  • Serine/threonine protein kinaseKOGKOG1187
  • protein phosphorylationPFAMPF00069
  • Protein tyrosine kinasePFAMPF07714
  • SERINE-THREONINE PROTEIN KINASE, PLANT-TYPEPantherPTHR23258
  • Serine/threonine protein kinaseKOGKOG1187
  • CRINKLY4 related 3ATAT3G55950
Glyma02g42450
  • NLI interacting factor-like phosphatasePFAMPF03031
  • NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATEDPantherPTHR12210
  • TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation)KOGKOG1605
  • protein bindingPFAMPF03031
  • NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATEDPantherPTHR12210
  • TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation)KOGKOG1605
  • Haloacid dehalogenase-like hydrolase (HAD) superfamily proteinATAT3G55960
Glyma02g42460
  • Casein kinase (serine/threonine/tyrosine protein kinase)KOGKOG1164
  • Protein kinase domainPFAMPF00069
  • CDC2-RELATED KINASEPantherPTHR11295
  • Dual-specificity tyrosine-phosphorylation regulated kinaseKOGKOG0667
  • protein phosphorylationPFAMPF00069
  • Protein tyrosine kinasePFAMPF07714
  • CDC2-RELATED KINASEPantherPTHR11295
  • Dual-specificity tyrosine-phosphorylation regulated kinaseKOGKOG0667
  • Protein kinase superfamily proteinATAT2G40120
  • Casein kinase (serine/threonine/tyrosine protein kinase)KOGKOG1164
Glyma02g42470
  • 2OG-Fe(II) oxygenase superfamilyPFAMPF03171
  • FE(II)/ ASCORBATE OXIDASE SUPERFAMILYPantherPTHR10209
  • Iron/ascorbate family oxidoreductasesKOGKOG0143
  • oxidoreductase activityPFAMPF03171
  • FE(II)/ ASCORBATE OXIDASE SUPERFAMILYPantherPTHR10209
  • Iron/ascorbate family oxidoreductasesKOGKOG0143
  • 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteinATAT3G11180
Glyma02g42481
  • WD domain, G-beta repeatPFAMPF00400
  • vesicle-mediated transportPFAMPF00957
  • TOMOSYNPantherPTHR10241
  • Tomosyn and related SNARE-interacting proteinsKOGKOG1983
  • syntaxin binding protein 5 (tomosyn)KOK08518
  • transducin family protein / WD-40 repeat family proteinATAT5G05570
Glyma02g42490
  • FE(II)/ ASCORBATE OXIDASE SUPERFAMILYPantherPTHR10209
  • Iron/ascorbate family oxidoreductasesKOGKOG0143
  • FE(II)/ ASCORBATE OXIDASE SUPERFAMILYPantherPTHR10209
  • Iron/ascorbate family oxidoreductasesKOGKOG0143
  • 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteinATAT3G11150
Glyma02g42500
  • Arabidopsis proteins of unknown functionPFAMPF03005
  • Arabidopsis proteins of unknown functionPFAMPF03005
  • Plant protein of unknown function (DUF828)ATAT3G55990
Glyma02g42510
  • Proteasome/cyclosome repeatPFAMPF01851
  • MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBERPantherPTHR12827
  • MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBERPantherPTHR12827
  • E3 ubiquitin ligase, putativeATAT5G05560
Glyma02g42526
  • MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBERPantherPTHR12827
  • E3 ubiquitin ligase, putativeATAT5G05560
Glyma02g42543
Glyma02g42560
Glyma02g42570
  • Helix-loop-helix DNA-binding domainPFAMPF00010
  • CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PASPantherPTHR23042
  • transcription regulator activityPFAMPF00010
  • BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATEDPantherPTHR10985
  • basic helix-loop-helix (bHLH) DNA-binding superfamily proteinATAT2G40200
Glyma02g42590
Glyma02g42602
Glyma02g42614
Glyma02g42627
  • Glycine rich protein familyPFAMPF07172
Glyma02g42640
Glyma02g42651
Glyma02g42660
  • SecE/Sec61-gamma subunits of protein translocation complexPFAMPF00584
  • SEC61 GAMMA SUBUNITPantherPTHR12309
  • Preprotein translocase, gamma subunitKOGKOG3498
  • protein targetingPFAMPF00584
  • SEC61 GAMMA SUBUNITPantherPTHR12309
  • Preprotein translocase, gamma subunitKOGKOG3498
  • secE/sec61-gamma protein transport proteinATAT4G24920
Glyma02g42671
  • protein targetingPFAMPF00584
  • SEC61 GAMMA SUBUNITPantherPTHR12309
  • Preprotein translocase, gamma subunitKOGKOG3498
  • protein transport protein SEC61 subunit gamma and related proteinsKOK07342
  • secE/sec61-gamma protein transport proteinATAT4G24920
Glyma02g42680
  • Indole-3-glycerol phosphate synthasePFAMPF00218
  • TRYPTOPHAN BIOSYNTHESIS PROTEINPantherPTHR22854
  • Anthranilate synthase component IIKOGKOG4201
  • Indole-3-glycerol-phosphate synthase.EC4.1.1.48
  • E4.1.1.48, trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48 ] [COG:COG0134 ] [GO:0004425 ]KOK01609
  • Activity=indole-3-glycerol-phosphate synthase; Pathway=tryptophan biosynthesisSoyCycTRPSYN-PWY
  • Activity=indole-3-glycerol-phosphate synthase; Pathway=tryptophan biosynthesisSoyCycTRPSYN-PWY
  • Activity=indole-3-glycerol-phosphate synthase; Pathway=superpathway of phenylalanine, tyrosine, and tryptophan biosynthesisSoyCycCOMPLETE-ARO-PWY
  • indole-3-glycerol-phosphate synthase activityPFAMPF00218
  • TRYPTOPHAN BIOSYNTHESIS PROTEINPantherPTHR22854
  • Anthranilate synthase component IIKOGKOG4201
  • indole-3-glycerol-phosphate synthaseEC4.1.1.48
  • indole-3-glycerol phosphate synthase [EC:4.1.1.48]KOK01609
  • Aldolase-type TIM barrel family proteinATAT5G48220
Glyma02g42696
  • Plant protein of unknown function (DUF827)PFAMPF05701
  • Plant protein of unknown function (DUF827)ATAT2G40480
Glyma02g42713
Glyma02g42730
Glyma02g42740
  • POT familyPFAMPF00854
  • OLIGOPEPTIDE TRANSPORTER-RELATEDPantherPTHR11654
  • H+/oligopeptide symporterKOGKOG1237
  • oligopeptide transportPFAMPF00854
  • OLIGOPEPTIDE TRANSPORTER-RELATEDPantherPTHR11654
  • H+/oligopeptide symporterKOGKOG1237
  • Major facilitator superfamily proteinATAT2G40460
Glyma02g42751
Glyma02g42760
Glyma02g42770
  • Hypoxia induced protein conserved regionPFAMPF04588
  • Hypoxia-responsive family proteinATAT3G05550
Glyma02g42780
Glyma02g42791
  • Protein of unknown function (DUF567)PFAMPF04525
  • Protein of unknown function (DUF567)ATAT2G14560






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