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← Mutant Description Page

Genes Covered By A Chromosome Alteration FN0172932.xx.xx.xx.xx.xx.03.M8.2

Gene Name

Gene Annotation

Ran BP2/NZF zinc finger-like superfamily protein AT AT1G70650

Ran BP2/NZF zinc finger-like superfamily protein AT AT1G70650

Late embryogenesis abundant protein PFAM PF02987
LATE EMBRYOGENESIS ABUNDANT (PLANTS) LEA-RELATED Panther PTHR23241
LATE EMBRYOGENESIS ABUNDANT (PLANTS) LEA-RELATED Panther PTHR23241
Late embryogenesis abundant protein (LEA) family protein AT AT4G13560

GIY-YIG catalytic domain PFAM PF01541
DNA MISMATCH REPAIR MUTS RELATED PROTEINS Panther PTHR11361
Mismatch repair ATPase MSH6 (MutS family) KOG KOG0217
mismatched DNA binding PFAM PF01624
mismatched DNA binding PFAM PF00488
DNA MISMATCH REPAIR MUTS RELATED PROTEINS Panther PTHR11361
Mismatch repair ATPase MSH6 (MutS family) KOG KOG0217
MUTL protein homolog 1 AT AT3G24320

protein binding PFAM PF00168
triglyceride lipase activity PFAM PF01764
MCTP-RELATED Panther PTHR16122
Predicted lipase KOG KOG4569
triglyceride lipases;triglyceride lipases AT AT4G13550

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Pentatricopeptide repeat (PPR-like) superfamily protein AT AT2G32630

Domain of unknown function DUF223 PFAM PF02721
Nucleic acid-binding, OB-fold-like protein AT AT2G05642

Sodium/hydrogen exchanger family PFAM PF00999
Predicted K+/H+-antiporter KOG KOG1650
cation transport PFAM PF00999
Predicted K+/H+-antiporter KOG KOG1650
cation/hydrogen exchanger 15 AT AT2G13620

Ribosomal protein S15 PFAM PF00312
RIBOSOMAL PROTEIN S15P/S13E Panther PTHR11885
intracellular PFAM PF00312
RIBOSOMAL PROTEIN S15P/S13E Panther PTHR11885
ribosomal protein S13A AT AT4G00100

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PFAM PF00076
RNA-BINDING RAS-GAP SH3 BINDING PROTEIN RELATED Panther PTHR10693
RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains KOG KOG0116
intracellular PFAM PF02136
nucleic acid binding PFAM PF00076
RNA-BINDING RAS-GAP SH3 BINDING PROTEIN RELATED Panther PTHR10693
RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains KOG KOG0116
Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain AT AT5G43960

F-box domain PFAM PF00646
F-box associated PFAM PF07734
F-box family protein AT AT3G06240

Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Transcription factor, Myb superfamily KOG KOG0048
myb proto-oncogene protein, plant KO K09422
myb domain protein 79 AT AT4G13480

Ammonium Transporter Family PFAM PF00909
AMMONIUM TRANSPORTER Panther PTHR11730
Ammonia permease KOG KOG0682
lateral root formation GO GO:0010311
response to karrikin GO GO:0080167
response to abscisic acid stimulus GO GO:0009737
ammonium transport GO GO:0015696
protein polymerization GO GO:0051258
nucleus GO GO:0005634
plasma membrane GO GO:0005886
membrane GO GO:0016020
ammonium transmembrane transporter activity GO GO:0008519
ammonium transmembrane transport GO GO:0072488
transport GO GO:0006810
Ammonium Transporter Family PFAM PF00909
ammonium transmembrane transporter activity Panther PTHR11730
Ammonia permease KOG KOG0682
ammonium transporter 1;1 AT AT4G13510

AT AT3G04310

RNA-binding (RRM/RBD/RNP motifs) family protein AT AT1G60000

Protease inhibitor/seed storage/LTP family PFAM PF00234
Protease inhibitor/seed storage/LTP family PFAM PF00234
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein AT AT3G18280

UNCHARACTERIZED Panther PTHR12176
UNCHARACTERIZED Panther PTHR12176
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein AT AT4G13330

protein dimerization activity PFAM PF05699
GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN Panther PTHR11697
TTF-type zinc finger protein with HAT dimerisation domain AT AT1G19260

Zinc finger, ZZ type PFAM PF00569
O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE, OGT Panther PTHR23083
Molecular chaperone (DnaJ superfamily) KOG KOG0550
protein binding PFAM PF00515
O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE, OGT Panther PTHR23083
Molecular chaperone (DnaJ superfamily) KOG KOG0550
Calcium-binding tetratricopeptide family protein AT AT1G05150

Domain of unknown function DUF223 PFAM PF02721
Nucleic acid-binding, OB-fold-like protein AT AT2G05642

Ribosomal protein S3, C-terminal domain PFAM PF00189
30S RIBOSOMAL PROTEIN S3 Panther PTHR11760
40S ribosomal protein S3 KOG KOG3181
RP-S3e, RPS3; small subunit ribosomal protein S3e [GO:0005843 ] KO K02985
iron-sulfur cluster binding GO GO:0051536
intracellular GO GO:0005622
negative regulation of DNA repair GO GO:0045738
NF-kappaB binding GO GO:0051059
cellular protein metabolic process GO GO:0044267
ruffle membrane GO GO:0032587
negative regulation of NF-kappaB transcription factor activity GO GO:0032088
endocrine pancreas development GO GO:0031018
protein kinase binding GO GO:0019901
viral transcription GO GO:0019083
viral infectious cycle GO GO:0019058
gene expression GO GO:0010467
viral reproduction GO GO:0016032
activation of caspase activity GO GO:0006919
response to DNA damage stimulus GO GO:0006974
induction of apoptosis GO GO:0006917
translational elongation GO GO:0006414
translational termination GO GO:0006415
translational initiation GO GO:0006413
cytosol GO GO:0005829
cytoplasm GO GO:0005737
endonuclease activity GO GO:0004519
nucleus GO GO:0005634
protein binding GO GO:0005515
DNA-(apurinic or apyrimidinic site) lyase activity GO GO:0003906
mRNA binding GO GO:0003729
damaged DNA binding GO GO:0003684
ribonucleoprotein complex GO GO:0030529
RNA binding GO GO:0003723
vacuole GO GO:0005773
vacuolar membrane GO GO:0005774
response to abiotic stimulus GO GO:0009628
chloroplast GO GO:0009507
response to salt stress GO GO:0009651
cytosolic ribosome GO GO:0022626
membrane GO GO:0016020
structural constituent of ribosome GO GO:0003735
translation GO GO:0006412
cytosolic small ribosomal subunit GO GO:0022627
nucleolus GO GO:0005730
RNA binding PFAM PF07650
intracellular PFAM PF00189
30S RIBOSOMAL PROTEIN S3 Panther PTHR11760
40S ribosomal protein S3 KOG KOG3181
small subunit ribosomal protein S3e KO K02985
Ribosomal protein S3 family protein AT AT5G35530

Syntaxin/t-SNARE family protein AT AT2G18860

protein dimerization activity PFAM PF05699
GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN Panther PTHR11697
TTF-type zinc finger protein with HAT dimerisation domain AT AT1G19260

protein dimerization activity PFAM PF05699
GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN Panther PTHR11697
TTF-type zinc finger protein with HAT dimerisation domain AT AT1G19260

Core histone H2A/H2B/H3/H4 PFAM PF00125
HISTONE H4 Panther PTHR10484
Histone H4 KOG KOG3467
DNA binding PFAM PF00125
transcription initiation factor activity PFAM PF02969
nucleosome Panther PTHR10484
Histone H4 KOG KOG3467
Histone superfamily protein AT AT3G46320

2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 Panther PTHR18901
2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 Panther PTHR18901
glycerol-3-phosphatase 1 AT AT4G25840

nucleus PFAM PF02309
indole-3-acetic acid inducible 33 AT AT5G57420

WD domain, G-beta repeat PFAM PF00400
WD40 REPEAT PROTEIN Panther PTHR13889
mRNA splicing factor KOG KOG0289
Ubiquitin--protein ligase. EC 6.3.2.19
pre-mRNA-processing factor 19 [EC:6.3.2.19] KO K10599
Prp19/Pso4-like PFAM PF08606
WD domain, G-beta repeat PFAM PF00400
WD40 REPEAT PROTEIN Panther PTHR13889
mRNA splicing factor KOG KOG0289
ubiquitinÂ—protein ligase EC 6.3.2.19
pre-mRNA-processing factor 19 [EC:6.3.2.19] KO K10599
MOS4-associated complex 3B AT AT2G33340

Ribosomal protein S3, C-terminal domain PFAM PF00189
30S RIBOSOMAL PROTEIN S3 Panther PTHR11760
40S ribosomal protein S3 KOG KOG3181
RP-S3e, RPS3; small subunit ribosomal protein S3e [GO:0005843 ] KO K02985
iron-sulfur cluster binding GO GO:0051536
cellular protein metabolic process GO GO:0044267
viral infectious cycle GO GO:0019058
viral transcription GO GO:0019083
endocrine pancreas development GO GO:0031018
viral reproduction GO GO:0016032
gene expression GO GO:0010467
protein binding GO GO:0005515
translational termination GO GO:0006415
translational initiation GO GO:0006413
NF-kappaB binding GO GO:0051059
negative regulation of DNA repair GO GO:0045738
ribonucleoprotein complex GO GO:0030529
negative regulation of NF-kappaB transcription factor activity GO GO:0032088
ruffle membrane GO GO:0032587
protein kinase binding GO GO:0019901
dendrite GO GO:0030425
response to DNA damage stimulus GO GO:0006974
endomembrane system GO GO:0012505
activation of caspase activity GO GO:0006919
translational elongation GO GO:0006414
induction of apoptosis GO GO:0006917
nucleus GO GO:0005634
cytoplasm GO GO:0005737
cytosol GO GO:0005829
endonuclease activity GO GO:0004519
intracellular GO GO:0005622
mRNA binding GO GO:0003729
DNA-(apurinic or apyrimidinic site) lyase activity GO GO:0003906
chloroplast GO GO:0009507
vacuole GO GO:0005773
vacuolar membrane GO GO:0005774
RNA binding GO GO:0003723
damaged DNA binding GO GO:0003684
response to abiotic stimulus GO GO:0009628
response to salt stress GO GO:0009651
nucleolus GO GO:0005730
membrane GO GO:0016020
cytosolic ribosome GO GO:0022626
cytosolic small ribosomal subunit GO GO:0022627
translation GO GO:0006412
structural constituent of ribosome GO GO:0003735
RNA binding PFAM PF07650
intracellular PFAM PF00189
30S RIBOSOMAL PROTEIN S3 Panther PTHR11760
40S ribosomal protein S3 KOG KOG3181
small subunit ribosomal protein S3e KO K02985
Ribosomal protein S3 family protein AT AT5G35530

Domain of unknown function DUF26 PFAM PF01657
Domain of unknown function DUF26 PFAM PF01657
plasmodesmata-located protein 2 AT AT1G04520

Cytoplasmic Fragile-X interacting family PFAM PF05994
P53 INDUCIBLE PROTEIN-RELATED Panther PTHR12195
transcription activators AT AT5G18410

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
Splicing factor 3b, subunit 4 KOG KOG0131
nucleic acid binding PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
Splicing factor 3b, subunit 4 KOG KOG0131
RNA-binding (RRM/RBD/RNP motifs) family protein AT AT1G60000

antiporter activity PFAM PF01554
SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN Panther PTHR11921
succinate dehydrogenase 2-2 AT AT5G40650

CCT motif PFAM PF06203
protein binding PFAM PF06203
CCT motif family protein AT AT1G04500

50S RIBOSOMAL PROTEIN L14-RELATED Panther PTHR11761
ribosome Panther PTHR11761
Ribosomal protein L14p/L23e family protein AT AT2G33370

HAD superfamily, subfamily IIIB (Acid phosphatase) PFAM PF03767
acid phosphatase activity PFAM PF03767
HAD superfamily, subfamily IIIB acid phosphatase AT AT1G04040

protein binding PFAM PF00646
F-box/RNI-like/FBD-like domains-containing protein AT AT5G53840

allergen-related AT AT2G30370

protein binding PFAM PF00646
F-box/RNI-like/FBD-like domains-containing protein AT AT5G56820

pheophytinase AT AT5G13800

F-box domain PFAM PF00646
F-box/RNI-like/FBD-like domains-containing protein AT AT1G80470

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