Genes Covered By A Chromosome Alteration FN0172728.03.M3.3

Gene Name

Gene Annotation

Glyma11g25780

Methyltransferase domain PFAM PF08241
PROTEIN ARGININE N-METHYLTRANSFERASE Panther PTHR11006
Protein arginine N-methyltransferase PRMT1 and related enzymes KOG KOG1499
methyltransferase activity PFAM PF05175
protein methyltransferase activity PFAM PF06325
methyltransferase activity PFAM PF08241
PROTEIN ARGININE N-METHYLTRANSFERASE Panther PTHR11006
Protein arginine N-methyltransferase PRMT1 and related enzymes KOG KOG1499
Methyltransferases. EC 2.1.1.-
protein arginine N-methyltransferase 3 [EC:2.1.1.-] KO K11436
protein arginine methyltransferase 3 AT AT3G12270

Glyma11g25821

Pentatricopeptide repeat (PPR) superfamily protein AT AT4G18975

Glyma11g25860

AT AT3G12320

Glyma11g25890

metalloendopeptidase activity PFAM PF01432
Zincin-like metalloproteases family protein AT AT5G10540

Glyma11g25900

AICARFT/IMPCHase bienzyme PFAM PF01808
BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN Panther PTHR11692
AICAR transformylase/IMP cyclohydrolase/methylglyoxal synthase KOG KOG2555
Phosphoribosylaminoimidazolecarboxamide formyltransferase. EC 2.1.2.3
E2.1.2.3, purH; phosphoribosylaminoimidazolecarboxamide formyltransferase [EC:2.1.2.3 ] [COG:COG0138 ] [GO:0004643 ] KO K00602
IMP cyclohydrolase. EC 3.5.4.10
E3.5.4.10, purH; IMP cyclohydrolase [EC:3.5.4.10 ] [COG:COG0138 ] [GO:0003937 ] KO K01492
chloroplast GO GO:0009507
stromule GO GO:0010319
chloroplast stroma GO GO:0009570
response to cold GO GO:0009409
purine nucleotide biosynthetic process GO GO:0006164
phosphoribosylaminoimidazolecarboxamide formyltransferase activity GO GO:0004643
catalytic activity GO GO:0003824
IMP cyclohydrolase activity GO GO:0003937
Activity=IMP cyclohydrolase; Pathway=purine nucleotides de novo biosynthesis II SoyCyc PWY-841
Activity=IMP cyclohydrolase; Pathway=inosine-5'-phosphate biosynthesis II SoyCyc PWY-6124
Activity=IMP cyclohydrolase; Pathway=purine nucleotides de novo biosynthesis II SoyCyc PWY-841
MGS-like domain PFAM PF02142
IMP biosynthetic process PFAM PF01808
phosphoribosylaminoimidazolecarboxamide formyltransferase activity Panther PTHR11692
AICAR transformylase/IMP cyclohydrolase/methylglyoxal synthase KOG KOG2555
phosphoribosylaminoimidazolecarboxamide formyltransferase EC 2.1.2.3
IMP cyclohydrolase EC 3.5.4.10
phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] KO K00602
AICARFT/IMPCHase bienzyme family protein AT AT2G35040

Glyma11g25910

Ribosomal protein S19e PFAM PF01090
40S RIBOSOMAL PROTEIN S19 Panther PTHR11710
40S ribosomal protein S19 KOG KOG3411
RP-S19e, RPS19; small subunit ribosomal protein S19e [GO:0005843 ] KO K02966
membrane GO GO:0016020
nucleolus GO GO:0005730
vacuole GO GO:0005773
cytosolic small ribosomal subunit GO GO:0022627
cell wall GO GO:0005618
cytosolic ribosome GO GO:0022626
translation GO GO:0006412
ribosome GO GO:0005840
structural constituent of ribosome GO GO:0003735
intracellular PFAM PF01090
intracellular Panther PTHR11710
40S ribosomal protein S19 KOG KOG3411
small subunit ribosomal protein S19e KO K02966
Ribosomal protein S19e family protein AT AT3G02080

Glyma11g25923

AT AT5G41980

Glyma11g25936

protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
MAPKK-RELATED SERINE/THREONINE PROTEIN KINASES Panther PTHR22986
mitogen-activated protein kinase kinase kinase 3 AT AT1G53570

Glyma11g25950

AT AT4G28230

Glyma11g25960

Sulfotransferase domain PFAM PF00685
SULFOTRANSFERASE (SULT) Panther PTHR11783
Sulfotransferase KOG KOG1584
sulfotransferase activity PFAM PF00685
SULFOTRANSFERASE (SULT) Panther PTHR11783
Sulfotransferase KOG KOG1584
sulfotransferase 2A AT AT5G07010

BED FINGER-RELATED Panther PTHR23272
BED zinc finger ;hAT family dimerisation domain AT AT3G42170

Glyma11g26120

SRF-type transcription factor (DNA-binding and dimerisation domain) PFAM PF00319
MADS BOX PROTEIN Panther PTHR11945
sequence-specific DNA binding PFAM PF00319
MADS BOX PROTEIN Panther PTHR11945
AGAMOUS-like 80 AT AT5G48670

Glyma11g26200

Protein of unknown function, DUF623 PFAM PF04844
Protein of unknown function, DUF623 PFAM PF04844
ovate family protein 3 AT AT5G58360

Glyma11g26210

Protein kinase domain PFAM PF00069
SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-RELATED Panther PTHR13902
Serine/threonine protein kinase KOG KOG0584
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-RELATED Panther PTHR13902
Serine/threonine protein kinase KOG KOG0584
with no lysine (K) kinase 4 AT AT5G58350

Glyma11g26230

Heavy-metal-associated domain PFAM PF00403
COPPER TRANSPORT PROTEIN ATOX1-RELATED Panther PTHR22814
Copper chaperone KOG KOG1603
metal ion transport PFAM PF00403
COPPER TRANSPORT PROTEIN ATOX1-RELATED Panther PTHR22814
Copper chaperone KOG KOG1603
Heavy metal transport/detoxification superfamily protein AT AT5G50740

Glyma11g26240

Pollen allergen PFAM PF01357
regulation of stomatal movement GO GO:0010119
response to red light GO GO:0010114
response to gibberellin stimulus GO GO:0009739
syncytium formation GO GO:0006949
plant-type cell wall GO GO:0009505
plant-type cell wall loosening GO GO:0009828
unidimensional cell growth GO GO:0009826
Rare lipoprotein A (RlpA)-like double-psi beta-barrel PFAM PF03330
Pollen allergen PFAM PF01357
expansin A8 AT AT2G40610

Glyma11g26250

Transport protein particle (TRAPP) complex subunit KOG KOG3368
Sybindin-like family PFAM PF04099
SYNBINDIN Panther PTHR23249
ER to Golgi vesicle-mediated transport GO GO:0006888
transport GO GO:0006810
molecular_function GO GO:0003674
cis-Golgi network PFAM PF04099
ER to Golgi vesicle-mediated transport PFAM PF04628
cis-Golgi network Panther PTHR23249
Transport protein particle (TRAPP) complex subunit KOG KOG3368
SNARE-like superfamily protein AT AT5G02280

Glyma11g26260

MADS BOX PROTEIN Panther PTHR11945
sequence-specific DNA binding PFAM PF00319
MADS BOX PROTEIN Panther PTHR11945
AGAMOUS-like 80 AT AT5G48670

Glyma11g26365

METALLOPROTEASE Panther PTHR11851
Insulinase (Peptidase family M16) family protein AT AT1G06900

Glyma11g26470

ThiC family PFAM PF01964
ADP-ribose pyrophosphohydrolase activity GO GO:0080041
chloroplast GO GO:0009507
plastid GO GO:0009536
iron-sulfur cluster binding GO GO:0051536
chloroplast stroma GO GO:0009570
response to vitamin B1 GO GO:0010266
thiamine biosynthetic process GO GO:0009228
detection of bacterium GO GO:0016045
catalytic activity GO GO:0003824
Activity=-; Pathway=4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis SoyCyc PWY-6890
Activity=-; Pathway=superpathway of thiamin diphosphate biosynthesis III (eukaryotes) SoyCyc THISYNARA-PWY
thiamine biosynthetic process PFAM PF01964
thiamine biosynthesis protein ThiC KO K03147
thiaminC AT AT2G29630

Glyma11g26480

gb def: hypothetical protein [arabidopsis thaliana] Panther PTHR13291:SF1
gb def: hypothetical protein [arabidopsis thaliana] Panther PTHR13291:SF1
josephin protein-related AT AT1G07300

Glyma11g26491

Thylakoid soluble phosphoprotein TSP9 PFAM PF11493
AT AT3G47070

Glyma11g26500

Cytochrome P450 PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP4/CYP19/CYP26 subfamilies KOG KOG0157
E1.14.-.-; [EC:1.14.-.- ] [COG:COG2124 ] KO K00517
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP4/CYP19/CYP26 subfamilies KOG KOG0157
Acting on paired donors, with incorporation or reduction of EC 1.14.-.-
beta-carotene 15,15'-monooxygenase [EC:1.14.99.36] KO K00517
cytochrome P450, family 86, subfamily A, polypeptide 1 AT AT5G58860

Glyma11g26510

Major Facilitator Superfamily PFAM PF07690
PHOSPHATE TRANSPORTER-RELATED Panther PTHR11662
Permease of the major facilitator superfamily KOG KOG2532
response to light stimulus GO GO:0009416
inorganic diphosphate transmembrane transporter activity GO GO:0030504
thylakoid GO GO:0009579
inorganic phosphate transmembrane transporter activity GO GO:0005315
response to nematode GO GO:0009624
membrane GO GO:0016020
carbohydrate transmembrane transporter activity GO GO:0015144
organic anion transmembrane transporter activity GO GO:0008514
sugar:hydrogen symporter activity GO GO:0005351
inorganic diphosphate transport GO GO:0030505
chloroplast thylakoid membrane GO GO:0009535
transmembrane transport PFAM PF07690
PHOSPHATE TRANSPORTER-RELATED Panther PTHR11662
Permease of the major facilitator superfamily KOG KOG2532
phosphate transporter 4;1 AT AT2G29650

Glyma11g26663

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
UNCHARACTERIZED Panther PTHR23163
E3 ubiquitin ligase involved in syntaxin degradation KOG KOG0978
ubiquitinÂ—protein ligase EC 6.3.2.19
E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] KO K10696
histone mono-ubiquitination 1 AT AT2G44950

Glyma11g26816

PIF1 helicase PFAM PF05970
HELICASE-RELATED Panther PTHR10492
PIF1 helicase AT AT3G51690

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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