Genes Covered By A Chromosome Alteration FN0170650.09.M3.2

Gene Name

Gene Annotation

Glyma04g35890

AT AT5G63040

Glyma04g35900

AT AT5G60840

Glyma04g35910

embryo defective 2759 AT AT5G63050

Glyma04g35925

Arabidopsis proteins of unknown function PFAM PF03080
Protein of Unknown Function (DUF239) AT AT5G50150

Glyma04g35940

JmjC domain PFAM PF02373
PHOSPHATIDYLSERINE RECEPTOR Panther PTHR12480
Uncharacterized conserved protein, contains JmjC domain KOG KOG2131
JmjC domain PFAM PF02373
PHOSPHATIDYLSERINE RECEPTOR Panther PTHR12480
Uncharacterized conserved protein, contains JmjC domain KOG KOG2131
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein AT AT5G63080

Glyma04g35950

ATPase family associated with various cellular activities (AAA) PFAM PF00004
AAA-FAMILY ATPASE Panther PTHR23077
AAA+-type ATPase KOG KOG0730
phagocytic vesicle GO GO:0045335
response to bacterium GO GO:0009617
ubiquitin-dependent protein catabolic process GO GO:0006511
cell cycle GO GO:0007049
ER-associated protein catabolic process GO GO:0030433
extracellular space GO GO:0005615
cytosol GO GO:0005829
hydrolase activity GO GO:0016787
nucleoside-triphosphatase activity GO GO:0017111
binding GO GO:0005488
ATP binding GO GO:0005524
nucleotide binding GO GO:0000166
nucleus GO GO:0005634
cytoplasm GO GO:0005737
cell division GO GO:0051301
pollen tube growth GO GO:0009860
pollen germination GO GO:0009846
phragmoplast GO GO:0009524
spindle GO GO:0005819
nuclear envelope GO GO:0005635
nucleolus GO GO:0005730
plasma membrane GO GO:0005886
response to cadmium ion GO GO:0046686
cytosolic ribosome GO GO:0022626
identical protein binding GO GO:0042802
cell wall GO GO:0005618
protein binding GO GO:0005515
ATPase activity GO GO:0016887
Activity=ATPase; Pathway=salvage pathways of adenine, hypoxanthine, and their nucleosides SoyCyc SALVADEHYPOX-PWY
Activity=ATPase; Pathway=salvage pathways of purine nucleosides II plant SoyCyc PWY-5043
ATP binding PFAM PF02359
ATP binding PFAM PF02933
ATP binding PFAM PF00004
PFAM PF05496
ATP binding PFAM PF07724
ATPase family associated with various cellular activities (AAA) PFAM PF07728
AAA-FAMILY ATPASE Panther PTHR23077
AAA+-type ATPase KOG KOG0730
transitional endoplasmic reticulum ATPase KO K13525
ATPase, AAA-type, CDC48 protein AT AT5G03340

Glyma04g35955

FAR1 DNA-binding domain PFAM PF03101

Glyma04g35960

Chromosome segregation protein (Spc25, Csm1, Pcs1) PFAM PF08234
Uncharacterized conserved protein KOG KOG4657
Chromosome segregation protein Spc25 PFAM PF08234
Uncharacterized conserved protein KOG KOG4657
kinetochore protein Spc25, animal type KO K11550
AT AT3G48210

Glyma04g35970

short chain dehydrogenase PFAM PF00106
SHORT-CHAIN DEHYDROGENASES/REDUCTASE Panther PTHR19410
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) KOG KOG1208
oxidoreductase activity PFAM PF00106
KR domain PFAM PF08659
coenzyme binding PFAM PF01370
SHORT-CHAIN DEHYDROGENASES/REDUCTASE Panther PTHR19410
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) KOG KOG1208
NAD(P)-binding Rossmann-fold superfamily protein AT AT5G50130

Glyma04g35980

Glyma04g36000

SUBFAMILY NOT NAMED Panther PTHR15217:SF1
Splicing regulator KOG KOG2991
SUBFAMILY NOT NAMED Panther PTHR15217:SF1
Splicing regulator KOG KOG2991
FKBP12 interacting protein 37 AT AT3G54170

Glyma04g36010

G-patch domain PFAM PF01585
RNA-BINDING PROTEIN Panther PTHR13948
nucleic acid binding PFAM PF01585
RNA-BINDING PROTEIN Panther PTHR13948
D111/G-patch domain-containing protein AT AT4G34140

Glyma04g36040

Allinase PFAM PF04864
SUBGROUP I AMINOTRANSFERASE RELATED Panther PTHR11751
Kynurenine aminotransferase, glutamine transaminase K KOG KOG0257
carbon-sulfur lyase activity PFAM PF04864
transferase activity, transferring nitrogenous groups PFAM PF00155
SUBGROUP I AMINOTRANSFERASE RELATED Panther PTHR11751
Kynurenine aminotransferase, glutamine transaminase K KOG KOG0257
tryptophan aminotransferase related 2 AT AT4G24670

Glyma04g36050

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT1G64310

Glyma04g36070

Glyma04g36080

Protein of unknown function DUF260 PFAM PF03195
Protein of unknown function DUF260 PFAM PF03195
Lateral organ boundaries (LOB) domain family protein AT AT5G63090

Glyma04g36090

Histone deacetylase domain PFAM PF00850
HISTONE DEACETYLASE Panther PTHR10625
Histone deacetylase complex, catalytic component RPD3 KOG KOG1342
HDAC1_2; histone deacetylase 1/2 [GO:0004407 ] KO K06067
Histone deacetylase domain PFAM PF00850
HISTONE DEACETYLASE Panther PTHR10625
Histone deacetylase complex, catalytic component RPD3 KOG KOG1342
histone deacetylase EC 3.5.1.98
histone deacetylase 1/2 [EC:3.5.1.98] KO K06067
histone deacetylase 6 AT AT5G63110

Glyma04g36101

Histone deacetylase domain PFAM PF00850
HISTONE DEACETYLASE Panther PTHR10625
histone deacetylase 6 AT AT5G63110

Glyma04g36110

Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Transcription factor, Myb superfamily KOG KOG0048
Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Transcription factor, Myb superfamily KOG KOG0048
myb domain protein 86 AT AT5G26660

Glyma04g36140

Ribosomal protein L15 PFAM PF00256
60S RIBOSOMAL PROTEIN L27A Panther PTHR11721
60s ribosomal protein L15/L27 KOG KOG1742
nucleolus GO GO:0005730
large ribosomal subunit GO GO:0015934
cytosolic large ribosomal subunit GO GO:0022625
membrane GO GO:0016020
cytosolic ribosome GO GO:0022626
ribosome GO GO:0005840
translation GO GO:0006412
structural constituent of ribosome GO GO:0003735
Ribosomal protein L18e/L15 PFAM PF00828
60S RIBOSOMAL PROTEIN L27A Panther PTHR11721
60s ribosomal protein L15/L27 KOG KOG1742
Ribosomal protein L18e/L15 superfamily protein AT AT1G70600

Glyma04g36150

C-5 cytosine-specific DNA methylase PFAM PF00145
MODIFICATION METHYLASE Panther PTHR10629
DNA (cytosine-5-)-methyltransferase. EC 2.1.1.37
E2.1.1.37, dcm; DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37 ] [COG:COG0270 ] [GO:0003886 ] KO K00558
Activity=DNA cytosine-5--methyltransferase; Pathway=methionine degradation I to homocysteine SoyCyc METHIONINE-DEG1-PWY
Cytosine specific DNA methyltransferase replication foci domain PFAM PF12047
DNA binding PFAM PF01426
DNA methylation PFAM PF00145
DNA methylation Panther PTHR10629
DNA (cytosine-5-)-methyltransferase EC 2.1.1.37
DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] KO K00558
methyltransferase 1 AT AT5G49160

Glyma04g36160

PB1 domain PFAM PF00564
protein binding PFAM PF00564
Octicosapeptide/Phox/Bem1p family protein AT AT3G48240

Glyma04g36170

AT AT5G63135

Glyma04g36180

GRAM domain PFAM PF02893
UNCHARACTERIZED Panther PTHR23319
Uncharacterized conserved protein, contains GRAM domain KOG KOG1032
protein binding PFAM PF00168
GRAM domain PFAM PF02893
UNCHARACTERIZED Panther PTHR23319
Uncharacterized conserved protein, contains GRAM domain KOG KOG1032
C2 calcium/lipid-binding and GRAM domain containing protein AT AT5G50170

Glyma04g36190

Leucine Rich Repeat PFAM PF00560
LEUCINE-RICH REPEAT-CONTAINING PROTEIN Panther PTHR23155
protein binding PFAM PF00560
LEUCINE-RICH REPEAT-CONTAINING PROTEIN Panther PTHR23155
plant intracellular ras group-related LRR 9 AT AT3G11330

Glyma04g36200

GLUCOSYL/GLUCURONOSYL TRANSFERASES Panther PTHR11926
UDP-glucuronosyl and UDP-glucosyl transferase KOG KOG1192
transferase activity, transferring hexosyl groups PFAM PF00201
transferase activity, transferring hexosyl groups Panther PTHR11926
UDP-glucuronosyl and UDP-glucosyl transferase KOG KOG1192
UDP-Glycosyltransferase superfamily protein AT AT2G30140

Glyma04g36210

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE Panther PTHR23257
Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs KOG KOG0192
protein serine/threonine/tyrosine kinase activity GO GO:0004712
kinase activity GO GO:0016301
protein phosphorylation GO GO:0006468
protein phosphorylation PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE Panther PTHR23257
Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs KOG KOG0192
Protein kinase superfamily protein AT AT5G50180

Glyma04g36221

Glyma04g36231

Glyma04g36240

ATPase family associated with various cellular activities (AAA) PFAM PF00004
AAA-FAMILY ATPASE Panther PTHR23077
AAA+-type ATPase KOG KOG0744
ATP binding PFAM PF00004
ATP binding PFAM PF07724
AAA-FAMILY ATPASE Panther PTHR23077
AAA+-type ATPase KOG KOG0744
P-loop containing nucleoside triphosphate hydrolases superfamily protein AT AT4G24710

Glyma04g36243

Glyma04g36246

Drought induced 19 protein (Di19) PFAM PF05605
drought-induced 19 AT AT1G56280

Glyma04g36250

Elongation factor Tu C-terminal domain PFAM PF03143
TRANSLATION FACTOR Panther PTHR23115
Mitochondrial translation elongation factor Tu KOG KOG0460
protein-synthesizing GTPase EC 3.6.5.3
EF-TU, tufA; elongation factor EF-Tu [EC:3.6.5.3 ] [COG:COG0050 ] [GO:0003746 ] KO K02358
Elongation factor Tu domain 2 PFAM PF03144
Elongation factor Tu GTP binding domain PFAM PF00009
apoplast GO GO:0048046
translational elongation GO GO:0006414
membrane GO GO:0016020
nucleoid GO GO:0009295
nucleolus GO GO:0005730
chloroplast stroma GO GO:0009570
chloroplast thylakoid membrane GO GO:0009535
chloroplast GO GO:0009507
nucleus GO GO:0005634
GTP binding GO GO:0005525
chloroplast envelope GO GO:0009941
GTPase activity GO GO:0003924
translation elongation factor activity GO GO:0003746
protein binding GO GO:0005515
GTP binding PFAM PF00009
GTP binding PFAM PF03144
GTP binding PFAM PF03143
TRANSLATION FACTOR Panther PTHR23115
Mitochondrial translation elongation factor Tu KOG KOG0460
protein-synthesizing GTPase EC 3.6.5.3
elongation factor EF-Tu [EC:3.6.5.3] KO K02358
RAB GTPase homolog E1B AT AT4G20360

Glyma04g36260

Protein tyrosine kinase PFAM PF07714
SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-RELATED Panther PTHR13902
Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs KOG KOG0192
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-RELATED Panther PTHR13902
Serine/threonine protein kinase KOG KOG0584
with no lysine (K) kinase 3 AT AT3G48260

Glyma04g36270

Plant protein of unknown function (DUF868) PFAM PF05910
Plant protein of unknown function (DUF868) PFAM PF05910
Plant protein of unknown function (DUF868) AT AT2G04220

Glyma04g36291

nucleotidyltransferase activity PFAM PF01909
TOPOISOMERASE-RELATED PROTEIN Panther PTHR23092
PAP/OAS1 substrate-binding domain superfamily AT AT3G56320

Glyma04g36310

tRNA intron endonuclease, catalytic C-terminal domain PFAM PF01974
FAMILY NOT NAMED Panther PTHR21227
tRNA splicing endonuclease SEN2 KOG KOG4685
tRNA-intron endonuclease. EC 3.1.27.9
tRNA-intron endonuclease [EC:3.1.27.9] KO K01170
tRNA splicing, via endonucleolytic cleavage and ligation PFAM PF02778
tRNA splicing, via endonucleolytic cleavage and ligation PFAM PF01974
TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 Panther PTHR21227
tRNA splicing endonuclease SEN2 KOG KOG4685
tRNA-intron endonuclease EC 3.1.27.9
tRNA-intron endonuclease [EC:3.1.27.9] KO K01170
splicing endonuclease 1 AT AT3G45590

Glyma04g36330

Eukaryotic membrane protein family PFAM PF05346
FAMILY NOT NAMED Panther PTHR13317
Eukaryotic membrane protein family PFAM PF05346
UNCHARACTERIZED Panther PTHR13317
Predicted membrane protein KOG KOG2490
AT AT1G67960

Glyma04g36341

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
cytochrome P450, family 71, subfamily B, polypeptide 20 AT AT3G26180

Glyma04g36351

CYTOCHROME P450 Panther PTHR19383
cytochrome P450, family 71, subfamily A, polypeptide 20 AT AT4G13310

Glyma04g36360

Protein kinase domain PFAM PF00069
CDC2-RELATED KINASE Panther PTHR11295
LAMMER dual specificity kinases KOG KOG0671
dual-specificity kinase EC 2.7.12.1
dual-specificity kinase [EC:2.7.12.1] KO K08287
protein autophosphorylation GO GO:0046777
protein serine/threonine kinase activity GO GO:0004674
mRNA processing GO GO:0006397
kinase activity GO GO:0016301
protein kinase activity GO GO:0004672
protein binding GO GO:0005515
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
CDC2-RELATED KINASE Panther PTHR11295
LAMMER dual specificity kinases KOG KOG0671
dual-specificity kinase EC 2.7.12.1
dual-specificity kinase [EC:2.7.12.1] KO K08287
FUS3-complementing gene 2 AT AT4G24740

Glyma04g36373

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
cytochrome P450, family 76, subfamily C, polypeptide 2 AT AT2G45570
cytochrome P450, family 76, subfamily C, polypeptide 4 AT AT2G45550

Glyma04g36386

Rhodanese-like domain PFAM PF00581
FAMILY NOT NAMED Panther PTHR13253
Rhodanese/Cell cycle control phosphatase superfamily protein AT AT4G24750

Glyma04g36400

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
COPINE Panther PTHR10857
Predicted E3 ubiquitin ligase KOG KOG4172
Copine PFAM PF07002
COPINE Panther PTHR10857
Predicted E3 ubiquitin ligase KOG KOG4172
RING domain ligase2 AT AT5G14420

Glyma04g36410

Raffinose synthase or seed inhibition protein Sip1 PFAM PF05691
Activity=galactinol-sucrose galactosyltransferase; Pathway=stachyose biosynthesis SoyCyc PWY-5337
Activity=Galactinol-sucrose galactosyltransferase; Pathway=stachyose biosynthesis SoyCyc PWY-5337
Raffinose synthase or seed inhibition protein Sip1 PFAM PF05691
seed imbibition 2 AT AT3G57520

Glyma04g36420

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
Splicing factor 3b, subunit 4 KOG KOG0131
nucleic acid binding PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
Splicing factor 3b, subunit 4 KOG KOG0131
31-kDa RNA binding protein AT AT4G24770

Glyma04g36430

Methyltransferase domain PFAM PF08241
PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE Panther PTHR11579
Protein-L-isoaspartate(D-aspartate) O-methyltransferase KOG KOG1661
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity PFAM PF01135
protein methyltransferase activity PFAM PF06325
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity Panther PTHR11579
Protein-L-isoaspartate(D-aspartate) O-methyltransferase KOG KOG1661
protein-l-isoaspartate methyltransferase 1 AT AT3G48330

Glyma04g36440

Mediator complex subunit 28 PFAM PF11594
AT AT3G01680

Glyma04g36450

Leucine Rich Repeat PFAM PF00560
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
protein binding PFAM PF00560
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine-rich repeat protein kinase family protein AT AT2G31880

Glyma04g36460

UNCHARACTERIZED Panther PTHR12277
Predicted alpha/beta hydrolase KOG KOG1552
PFAM PF05677
alpha/beta hydrolase fold PFAM PF00561
serine-type peptidase activity PFAM PF00326
hydrolase activity PFAM PF01738
Serine hydrolase (FSH1) PFAM PF03959
UNCHARACTERIZED Panther PTHR12277
Predicted alpha/beta hydrolase KOG KOG1552
alpha/beta-Hydrolases superfamily protein AT AT4G24760

Glyma04g36470

Papain family cysteine protease PFAM PF00112
CYSTEINE PROTEASE FAMILY C1-RELATED Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
cathepsin V [EC:3.4.22.43] KO K01376
Cathepsin propeptide inhibitor domain (I29) PFAM PF08246
cysteine-type peptidase activity PFAM PF00112
cysteine-type peptidase activity Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
Cysteine endopeptidases. EC 3.4.22.-
cathepsin V [EC:3.4.22.43] KO K01376
Cysteine proteinases superfamily protein AT AT5G50260

Glyma04g36480

Peptide methionine sulfoxide reductase PFAM PF01625
METHIONINE SULFOXIDE REDUCTASE Panther PTHR10173
Peptide methionine sulfoxide reductase KOG KOG1635
oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor PFAM PF01625
METHIONINE SULFOXIDE REDUCTASE Panther PTHR10173
Peptide methionine sulfoxide reductase KOG KOG1635
peptidemethionine sulfoxide reductase 2 AT AT5G07460

Glyma04g36500

BTB/POZ domain PFAM PF00651
KELCH-RELATED PROTEINS Panther PTHR23230
CREB binding protein/P300 and related TAZ Zn-finger proteins KOG KOG1778
protein binding PFAM PF00651
transcription cofactor activity PFAM PF02135
KELCH-RELATED PROTEINS Panther PTHR23230
CREB binding protein/P300 and related TAZ Zn-finger proteins KOG KOG1778
BTB and TAZ domain protein 2 AT AT3G48360

Glyma04g36520

Pectate lyase PFAM PF00544
membrane GO GO:0016020
endomembrane system GO GO:0012505
lyase activity GO GO:0016829
pectate lyase activity GO GO:0030570
biological_process GO GO:0008150
Pectate lyase PFAM PF00544
pectate lyase EC 4.2.2.2
pectate lyase [EC:4.2.2.2] KO K01728
Pectin lyase-like superfamily protein AT AT5G63180

Glyma04g36540

REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT Panther PTHR11669
Replication factor C, subunit RFC4 KOG KOG0989
ATP binding PFAM PF00004
REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT Panther PTHR11669
Replication factor C, subunit RFC4 KOG KOG0989
AAA-type ATPase family protein AT AT4G24790

Glyma04g36560

Peptidase family C78 PFAM PF07910
FAMILY NOT NAMED Panther PTHR13226
Peptidase family C78 PFAM PF07910
FAMILY NOT NAMED Panther PTHR13226
Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 AT AT3G48380

Glyma04g36570

MA3 domain PFAM PF02847
PROGRAMMED CELL DEATH 4 Panther PTHR12626
Neoplastic transformation suppressor Pdcd4/MA-3, contains MA3 domain KOG KOG0403
MA3 domain PFAM PF02847
PROGRAMMED CELL DEATH 4 Panther PTHR12626
Neoplastic transformation suppressor Pdcd4/MA-3, contains MA3 domain KOG KOG0403
MA3 domain-containing protein AT AT5G63190

Glyma04g36580

Tetratricopeptide repeat PFAM PF00515
O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE, OGT Panther PTHR23083
protein binding PFAM PF00515
Tetratricopeptide repeat PFAM PF07719
O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE, OGT Panther PTHR23083
tetratricopeptide repeat (TPR)-containing protein AT AT5G63200

Glyma04g36600

haloacid dehalogenase-like hydrolase PFAM PF00702
2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 Panther PTHR18901
Predicted haloacid-halidohydrolase and related hydrolases KOG KOG2914
catalytic activity PFAM PF00702
2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 Panther PTHR18901
Predicted haloacid-halidohydrolase and related hydrolases KOG KOG2914
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein AT AT3G48420

Glyma04g36610

Endonuclease/Exonuclease/phosphatase family PFAM PF03372
AP ENDONUCLEASE Panther PTHR22748
Apurinic/apyrimidinic endonuclease and related enzymes KOG KOG1294
Endonuclease/Exonuclease/phosphatase family PFAM PF03372
nuclease activity Panther PTHR22748
Apurinic/apyrimidinic endonuclease and related enzymes KOG KOG1294
DNAse I-like superfamily protein AT AT3G48425

Glyma04g36620

Zinc finger, C2H2 type PFAM PF00096
JUMONJI DOMAIN CONTAINING PROTEIN Panther PTHR10694
jmjN domain PFAM PF02375
JmjC domain PFAM PF02373
JUMONJI DOMAIN CONTAINING PROTEIN Panther PTHR10694
relative of early flowering 6 AT AT3G48430
ZINC FINGER PROTEIN Panther PTHR11389

Glyma04g36630

Zinc finger, C2H2 type PFAM PF00096
JUMONJI DOMAIN CONTAINING PROTEIN Panther PTHR10694
jmjN domain PFAM PF02375
JmjC domain PFAM PF02373
JUMONJI DOMAIN CONTAINING PROTEIN Panther PTHR10694
relative of early flowering 6 AT AT3G48430

Glyma04g36670

Zinc finger C-x8-C-x5-C-x3-H type (and similar) PFAM PF00642
U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT Panther PTHR12620
CCCH-type Zn-finger protein KOG KOG1677
nucleic acid binding PFAM PF00642
U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT Panther PTHR12620
CCCH-type Zn-finger protein KOG KOG1677
Zinc finger C-x8-C-x5-C-x3-H type family protein AT AT3G48440

Glyma04g36700

Retinoblastoma-associated protein B domain PFAM PF01857
RB RELATED Panther PTHR13742
Rb (Retinoblastoma tumor suppressor)-related protein KOG KOG1010
Domain of unknown function (DUF3452) PFAM PF11934
nucleus PFAM PF01858
nucleus PFAM PF01857
RB RELATED Panther PTHR13742
Rb (Retinoblastoma tumor suppressor)-related protein KOG KOG1010
retinoblastoma-related 1 AT AT3G12280

Glyma04g36725

1,3-beta-D-glucan synthase complex PFAM PF02364
1,3-beta-glucan synthase/callose synthase catalytic subunit KOG KOG0916
Hexosyltransferases. EC 2.4.1.-
callose synthase [EC:2.4.1.-] KO K11000
glucan synthase-like 8 AT AT2G36850

Glyma04g36750

B3 DNA binding domain PFAM PF02362
regulation of transcription, DNA-dependent PFAM PF02362
AP2/B3-like transcriptional factor family protein AT AT4G01580

Glyma04g36760

PURINE PERMEASE Panther PTHR11119
transport PFAM PF00860
transport PFAM PF00916
transport Panther PTHR11119
Xanthine/uracil permease family protein AT AT5G50300

Glyma04g36770

Kelch motif PFAM PF07646
KELCH REPEAT DOMAIN Panther PTHR23244
Protein containing repeated kelch motifs KOG KOG1230
protein binding PFAM PF01344
protein binding PFAM PF07646
KELCH REPEAT DOMAIN Panther PTHR23244
Protein containing repeated kelch motifs KOG KOG1230
Galactose oxidase/kelch repeat superfamily protein AT AT5G50310

Glyma04g36780

HemN C-terminal region PFAM PF06969
COPROPORPHYRINIGEN III OXIDASE Panther PTHR13932
coproporphyrinogen dehydrogenase EC 1.3.99.22
E1.3.99.22, hemN, hemZ; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22 ] [COG:COG0635 ] KO K02495
Activity=coproporphyrinogen_III_oxidase,_anaerobic; Pathway=heme biosynthesis from uroporphyrinogen II SoyCyc HEMESYN2-PWY
iron-sulfur cluster binding PFAM PF04055
coproporphyrinogen oxidase activity PFAM PF06969
COPROPORPHYRINIGEN III OXIDASE Panther PTHR13932
coproporphyrinogen dehydrogenase EC 1.3.99.22
oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] KO K02495
Radical SAM superfamily protein AT AT5G63290

Glyma04g36790

Acetyltransferase (GNAT) family PFAM PF00583
HISTONE ACETYLTRANSFERASE-RELATED Panther PTHR11135
RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase KOG KOG2535
elongator complex protein 3 [EC:2.3.1.48] KO K07739
DNA mediated transformation GO GO:0009294
organ growth GO GO:0035265
cell proliferation GO GO:0008283
histone acetyltransferase activity GO GO:0004402
iron-sulfur cluster binding PFAM PF04055
N-acetyltransferase activity PFAM PF00583
HISTONE ACETYLTRANSFERASE-RELATED Panther PTHR11135
RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase KOG KOG2535
histone acetyltransferase EC 2.3.1.48
elongator complex protein 3 [EC:2.3.1.48] KO K07739
radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein AT AT5G50320

Glyma04g36800

Telomere length regulation protein PFAM PF10193
FAMILY NOT NAMED Panther PTHR15830
Telomere length regulation protein PFAM PF10193
FAMILY NOT NAMED Panther PTHR15830
embryo defective 2423 AT AT3G48470

Glyma04g36810

Ulp1 protease family, C-terminal catalytic domain PFAM PF02902
SENTRIN/SUMO-SPECIFIC PROTEASE Panther PTHR12606
cysteine-type peptidase activity PFAM PF02902
SENTRIN/SUMO-SPECIFIC PROTEASE Panther PTHR12606
Cysteine proteinases superfamily protein AT AT3G48480

Glyma04g36820

VHS DOMAIN CONTAINING PROTEIN FAMILY Panther PTHR13856
intracellular protein transport PFAM PF03127
VHS DOMAIN CONTAINING PROTEIN FAMILY Panther PTHR13856
ENTH/VHS/GAT family protein AT AT5G63640

Glyma04g36841

MULE transposase domain PFAM PF10551
PFAM PF00872
FAR1-related sequence 5 AT AT4G38180

Glyma04g36860

Glyceraldehyde 3-phosphate dehydrogenase (phosphorylating). EC 1.2.1.12
E1.2.1.12, GAPD, gapA; glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12 ] [COG:COG0057 ] [GO:0004365 ] KO K00134
Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PFAM PF02800
GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE Panther PTHR10836
Glyceraldehyde 3-phosphate dehydrogenase KOG KOG0657
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=sucrose biosynthesis SoyCyc SUCSYN-PWY
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=gluconeogenesis I SoyCyc GLUCONEO-PWY
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=sucrose degradation VI (anaerobic) SoyCyc PWY-3801
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=superpathway of glycolysis and Entner-Doudoroff SoyCyc GLYCOLYSIS-E-D
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle SoyCyc PWY-5464
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=glycolysis I SoyCyc GLYCOLYSIS
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=glycolysis IV (plant cytosol) SoyCyc PWY-1042
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=glycolysis II (from fructose-6P) SoyCyc PWY-5484
response to heat GO GO:0009408
response to sucrose stimulus GO GO:0009744
response to stress GO GO:0006950
seed development GO GO:0048316
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity GO GO:0004365
fruit development GO GO:0010154
apoplast GO GO:0048046
response to salt stress GO GO:0009651
response to hydrogen peroxide GO GO:0042542
vacuolar membrane GO GO:0005774
mitochondrial envelope GO GO:0005740
zinc ion binding GO GO:0008270
copper ion binding GO GO:0005507
membrane GO GO:0016020
response to cadmium ion GO GO:0046686
defense response to bacterium GO GO:0042742
gluconeogenesis GO GO:0006094
cell wall GO GO:0005618
cytosol GO GO:0005829
nucleolus GO GO:0005730
plasma membrane GO GO:0005886
chloroplast GO GO:0009507
nucleus GO GO:0005634
response to oxidative stress GO GO:0006979
mitochondrion GO GO:0005739
glyceraldehyde-3-phosphate dehydrogenase activity GO GO:0008943
glycolysis GO GO:0006096
Activity=Glyceraldehyde_3-phosphate_dehydrogenase; Pathway=superpathway of glycolysis and Entner-Doudoroff SoyCyc GLYCOLYSIS-E-D
Activity=Glyceraldehyde_3-phosphate_dehydrogenase; Pathway=superpathway of cytosolic glycolysis plants, pyruvate dehydrogenase and TCA cycle SoyCyc PWY-5464
Activity=Glyceraldehyde_3-phosphate_dehydrogenase; Pathway=Gluconeogenesis SoyCyc GLUCONEO-PWY
Activity=Glyceraldehyde_3-phosphate_dehydrogenase; Pathway=sucrose degradation to ethanol and lactate anaerobic SoyCyc PWY-3801
Activity=Glyceraldehyde_3-phosphate_dehydrogenase; Pathway=Glycolysis IV plant cytosol SoyCyc PWY-1042
Activity=Glyceraldehyde_3-phosphate_dehydrogenase; Pathway=Glycolysis III SoyCyc ANAGLYCOLYSIS-PWY
Activity=Glyceraldehyde_3-phosphate_dehydrogenase; Pathway=Glycolysis I SoyCyc GLYCOLYSIS
Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PFAM PF00044
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor PFAM PF02800
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Panther PTHR10836
Glyceraldehyde 3-phosphate dehydrogenase KOG KOG0657
glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) EC 1.2.1.12
glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] KO K00134
glyceraldehyde-3-phosphate dehydrogenase C2 AT AT1G13440

Glyma04g36870

Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PFAM PF02800
GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE Panther PTHR10836
Glyceraldehyde 3-phosphate dehydrogenase KOG KOG0657
Glyceraldehyde 3-phosphate dehydrogenase (phosphorylating). EC 1.2.1.12
E1.2.1.12, GAPD, gapA; glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12 ] [COG:COG0057 ] [GO:0004365 ] KO K00134
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=sucrose biosynthesis SoyCyc SUCSYN-PWY
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=gluconeogenesis I SoyCyc GLUCONEO-PWY
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=sucrose degradation VI (anaerobic) SoyCyc PWY-3801
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=superpathway of glycolysis and Entner-Doudoroff SoyCyc GLYCOLYSIS-E-D
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle SoyCyc PWY-5464
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=glycolysis I SoyCyc GLYCOLYSIS
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=glycolysis IV (plant cytosol) SoyCyc PWY-1042
Activity=glyceraldehyde_3-phosphate_dehydrogenase; Pathway=glycolysis II (from fructose-6P) SoyCyc PWY-5484
zinc ion binding GO GO:0008270
cell wall GO GO:0005618
defense response to bacterium GO GO:0042742
nucleolus GO GO:0005730
response to heat GO GO:0009408
response to sucrose stimulus GO GO:0009744
response to stress GO GO:0006950
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity GO GO:0004365
copper ion binding GO GO:0005507
fruit development GO GO:0010154
seed development GO GO:0048316
apoplast GO GO:0048046
chloroplast GO GO:0009507
response to salt stress GO GO:0009651
plasma membrane GO GO:0005886
membrane GO GO:0016020
vacuolar membrane GO GO:0005774
response to cadmium ion GO GO:0046686
gluconeogenesis GO GO:0006094
response to hydrogen peroxide GO GO:0042542
cytosol GO GO:0005829
nucleus GO GO:0005634
mitochondrial envelope GO GO:0005740
response to oxidative stress GO GO:0006979
mitochondrion GO GO:0005739
glyceraldehyde-3-phosphate dehydrogenase activity GO GO:0008943
glycolysis GO GO:0006096
Activity=Glyceraldehyde_3-phosphate_dehydrogenase; Pathway=superpathway of glycolysis and Entner-Doudoroff SoyCyc GLYCOLYSIS-E-D
Activity=Glyceraldehyde_3-phosphate_dehydrogenase; Pathway=superpathway of cytosolic glycolysis plants, pyruvate dehydrogenase and TCA cycle SoyCyc PWY-5464
Activity=Glyceraldehyde_3-phosphate_dehydrogenase; Pathway=Gluconeogenesis SoyCyc GLUCONEO-PWY
Activity=Glyceraldehyde_3-phosphate_dehydrogenase; Pathway=sucrose degradation to ethanol and lactate anaerobic SoyCyc PWY-3801
Activity=Glyceraldehyde_3-phosphate_dehydrogenase; Pathway=Glycolysis IV plant cytosol SoyCyc PWY-1042
Activity=Glyceraldehyde_3-phosphate_dehydrogenase; Pathway=Glycolysis III SoyCyc ANAGLYCOLYSIS-PWY
Activity=Glyceraldehyde_3-phosphate_dehydrogenase; Pathway=Glycolysis I SoyCyc GLYCOLYSIS
Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PFAM PF00044
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor PFAM PF02800
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Panther PTHR10836
Glyceraldehyde 3-phosphate dehydrogenase KOG KOG0657
glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) EC 1.2.1.12
glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] KO K00134
glyceraldehyde-3-phosphate dehydrogenase C subunit 1 AT AT3G04120

Glyma04g36880

AT AT5G50350

Glyma04g36900

Nucleic acid-binding, OB-fold-like protein AT AT3G48500

Glyma04g36910

Bromodomain PFAM PF00439
FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS Panther PTHR22880
Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins KOG KOG1474
protein binding PFAM PF00439
FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS Panther PTHR22880
Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins KOG KOG1474
nuclear protein X1 AT AT5G63320

Glyma04g36920

AT AT3G48510

Glyma04g36930

Kinase binding protein CGI-121 PFAM PF08617
CGI-121 FAMILY MEMBER Panther PTHR15840
Cell growth regulatory protein CGR11 KOG KOG4066
Kinase binding protein CGI-121 PFAM PF08617
CGI-121 FAMILY MEMBER Panther PTHR15840
Cell growth regulatory protein CGR11 KOG KOG4066
AT AT4G34412

Glyma04g36940

Aminopeptidase I zinc metalloprotease (M18) PFAM PF02127
Aminopeptidase I zinc metalloprotease (M18) KOG KOG2596
Aspartyl aminopeptidase. EC 3.4.11.21
aspartyl aminopeptidase [EC:3.4.11.21] KO K01267
aminopeptidase activity PFAM PF02127
PFAM PF05343
Aminopeptidase I zinc metalloprotease (M18) KOG KOG2596
aspartyl aminopeptidase EC 3.4.11.21
aspartyl aminopeptidase [EC:3.4.11.21] KO K01267
Zn-dependent exopeptidases superfamily protein AT AT5G60160

Glyma04g36950

AMP-binding enzyme PFAM PF00501
AMP DEPENDENT LIGASE/SYNTHETASE Panther PTHR11968
Acyl-CoA synthetase KOG KOG1176
Activity=fatty-acyl-CoA synthase; Pathway=4-hydroxybenzoate biosynthesis V SoyCyc PWY-6435
Activity=fatty-acyl-CoA synthase; Pathway=suberin biosynthesis SoyCyc PWY-1121
Activity=fatty-acyl-CoA synthase; Pathway=phenylpropanoid biosynthesis SoyCyc PWY-361
Activity=fatty-acyl-CoA synthase; Pathway=flavonoid biosynthesis SoyCyc PWY1F-FLAVSYN
Activity=fatty-acyl-CoA synthase; Pathway=fatty acids biosynthesis yeast SoyCyc PWY-5970
catalytic activity PFAM PF00501
AMP DEPENDENT LIGASE/SYNTHETASE Panther PTHR11968
Acyl-CoA synthetase KOG KOG1176
AMP-dependent synthetase and ligase family protein AT AT5G63380

Glyma04g36980

Leucine Rich Repeat PFAM PF00560
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
protein binding PFAM PF00560
protein phosphorylation PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine-rich repeat protein kinase family protein AT AT5G14210

Glyma04g37000

Cycloeucalenol cycloisomerase. EC 5.5.1.9
cycloeucalenol cycloisomerase [EC:5.5.1.9] KO K08246
Activity=Cycloeucalenol cycloisomerase; Pathway=plant sterol biosynthesis SoyCyc PWY-2541
pinocytosis GO GO:0006907
positive gravitropism GO GO:0009958
endoplasmic reticulum GO GO:0005783
cycloeucalenol cycloisomerase activity GO GO:0047793
cytokinesis GO GO:0000910
sterol biosynthetic process GO GO:0016126
Activity=Cycloeucalenol cycloisomerase; Pathway=plant sterol biosynthesis SoyCyc PWY-2541
cycloeucalenol cycloisomerase EC 5.5.1.9
cycloeucalenol cycloisomerase [EC:5.5.1.9] KO K08246
cyclopropyl isomerase AT AT5G50375

Glyma04g37010

DNA POLYMERASE I Panther PTHR10133
DNA POLYMERASE I Panther PTHR10133
polymerase gamma 1 AT AT3G20540

Glyma04g37020

RNA-metabolising metallo-beta-lactamase PFAM PF07521
RNA-metabolising metallo-beta-lactamase PFAM PF07521
RNA-metabolising metallo-beta-lactamase family protein AT AT5G63420
hydrolase activity PFAM PF00753
CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR Panther PTHR11203
mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit) KOG KOG1137

Glyma04g37030

Proteasome A-type and B-type PFAM PF00227
PROTEASOME SUBUNIT ALPHA/BETA Panther PTHR11599
20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2 KOG KOG0175
Proteasome endopeptidase complex. EC 3.4.25.1
PSMB5; 20S proteasome subunit beta 5 [EC:3.4.25.1 ] [COG:COG0638 ] KO K02737
peptidase activity GO GO:0008233
response to cadmium ion GO GO:0046686
proteasome complex GO GO:0000502
proteolysis involved in cellular protein catabolic process GO GO:0051603
proteasome core complex GO GO:0005839
ubiquitin-dependent protein catabolic process GO GO:0006511
threonine-type endopeptidase activity GO GO:0004298
endopeptidase activity GO GO:0004175
proteolysis involved in cellular protein catabolic process PFAM PF00227
PROTEASOME SUBUNIT ALPHA/BETA Panther PTHR11599
20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2 KOG KOG0175
proteasome endopeptidase complex EC 3.4.25.1
20S proteasome subunit beta 5 [EC:3.4.25.1] KO K02737
N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein AT AT3G26340

Glyma04g37040

EF hand PFAM PF00036
CALMODULIN Panther PTHR10891
Calmodulin and related proteins (EF-Hand superfamily) KOG KOG0027
EF hand PFAM PF00036
CALMODULIN Panther PTHR10891
Calmodulin and related proteins (EF-Hand superfamily) KOG KOG0027
calmodulin-like 38 AT AT1G76650

Glyma04g37081

protein binding PFAM PF00498
PFAM PF05496
ATP binding PFAM PF00004
AAA ATPASE Panther PTHR23074
AAA+-type ATPase KOG KOG0737
AAA-type ATPase family protein AT AT4G02480

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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