Genes Covered By A Chromosome Alteration FN0170550.M2.5

Gene Name

Gene Annotation

Glyma19g37870

protein binding AT AT3G52770

Glyma19g37880

Yip1 domain PFAM PF04893
GOLGI MEMBRANE PROTEIN YIP1 Panther PTHR21236
Rab GTPase interacting factor, Golgi membrane protein KOG KOG3103
membrane PFAM PF04893
GOLGI MEMBRANE PROTEIN YIP1 Panther PTHR21236
Rab GTPase interacting factor, Golgi membrane protein KOG KOG3103
Integral membrane Yip1 family protein AT AT3G52760

Glyma19g37890

Phosphatidylethanolamine-binding protein PFAM PF01161
PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN Panther PTHR11362
Phosphatidylethanolamine binding protein KOG KOG3346
Phosphatidylethanolamine-binding protein PFAM PF01161
PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN Panther PTHR11362
Phosphatidylethanolamine binding protein KOG KOG3346
PEBP (phosphatidylethanolamine-binding protein) family protein AT AT5G03840

Glyma19g37900

HYDROLASE-RELATED Panther PTHR10992:SF17
Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) KOG KOG1454
HYDROLASE-RELATED Panther PTHR10992:SF17
Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) KOG KOG1454
alpha/beta-Hydrolases superfamily protein AT AT2G36290

Glyma19g37910

bZIP transcription factor PFAM PF00170
CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Panther PTHR22952
Basic region leucine zipper PFAM PF07716
protein dimerization activity PFAM PF00170
CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Panther PTHR22952
Basic-leucine zipper (bZIP) transcription factor family protein AT AT2G36270

Glyma19g37920

Leucine Rich Repeat PFAM PF07723
protein binding PFAM PF00646
F-box/RNI-like superfamily protein AT AT1G67190

Glyma19g37930

Iron-sulphur cluster biosynthesis PFAM PF01521
HES-B RELATED Panther PTHR10072
Fe-S cluster biosynthesis protein ISA1 (contains a HesB-like domain) KOG KOG1120
Iron-sulphur cluster biosynthesis PFAM PF01521
HES-B RELATED Panther PTHR10072
Fe-S cluster biosynthesis protein ISA1 (contains a HesB-like domain) KOG KOG1120
Iron-sulphur cluster biosynthesis family protein AT AT2G16710

Glyma19g37940

Tubulin/FtsZ family, C-terminal domain PFAM PF03953
protein complex PFAM PF00091
FtsZ family, C-terminal domain PFAM PF12327
Tubulin/FtsZ family protein AT AT2G36250

Glyma19g37951

AT AT3G52740

Glyma19g37961

mitochondrial electron transport, ubiquinol to cytochrome c PFAM PF05365
mitochondrial electron transport, ubiquinol to cytochrome c Panther PTHR12980
Ubiquinol cytochrome c oxidoreductase, subunit QCR9 KOG KOG3494
Ubiquinol--cytochrome c reductase. EC 1.10.2.2
ubiquinol-cytochrome c reductase subunit 9 [EC:1.10.2.2] KO K00419
ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein AT AT3G52730

Glyma19g37971

Glyma19g37980

Ribosomal protein L1p/L10e family PFAM PF00687
60S RIBOSOMAL PROTEIN L10A - RELATED Panther PTHR23105
60S ribosomal protein L10A KOG KOG1570
RP-L10Ae, RPL10A; large subunit ribosomal protein L10Ae [GO:0005842 ] KO K02865
post-embryonic organ development GO GO:0048569
plasma membrane GO GO:0005886
large ribosomal subunit GO GO:0015934
adaxial/abaxial pattern formation GO GO:0009955
cytosolic large ribosomal subunit GO GO:0022625
translation GO GO:0006412
nucleolus GO GO:0005730
cytosolic ribosome GO GO:0022626
RNA processing GO GO:0006396
ribosome GO GO:0005840
RNA binding GO GO:0003723
structural constituent of ribosome GO GO:0003735
RNA binding PFAM PF00687
60S RIBOSOMAL PROTEIN L10A - RELATED Panther PTHR23105
60S ribosomal protein L10A KOG KOG1570
large subunit ribosomal protein L10Ae KO K02865
Ribosomal protein L1p/L10e family AT AT5G22440

Glyma19g37990

Acetyltransferase (GNAT) family PFAM PF00583
FAMILY NOT NAMED Panther PTHR13355
Glucosamine-phosphate N-acetyltransferase KOG KOG3396
Glucosamine-phosphate N-acetyltransferase. EC 2.3.1.4
E2.3.1.4, GNA1; glucosamine-phosphate N-acetyltransferase [EC:2.3.1.4 ] [COG:COG0454 ] [GO:0004343 ] KO K00621
Activity=glucosamine_6-phosphate_N-acetylase; Pathway=UDP-N-acetyl-D-glucosamine biosynthesis II SoyCyc UDPNACETYLGALSYN-PWY
N-acetyltransferase activity PFAM PF00583
GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE Panther PTHR13355
Glucosamine-phosphate N-acetyltransferase KOG KOG3396
glucosamine-phosphate N-acetyltransferase EC 2.3.1.4
glucosamine-phosphate N-acetyltransferase [EC:2.3.1.4] KO K00621
glucose-6-phosphate acetyltransferase 1 AT AT5G15770

Glyma19g38000

Glyma19g38010

SOUL heme-binding protein PFAM PF04832
HEME-BINDING PROTEIN-RELATED Panther PTHR11220
SOUL heme-binding protein PFAM PF04832
HEME-BINDING PROTEIN-RELATED Panther PTHR11220
SOUL heme-binding family protein AT AT3G10130

Glyma19g38020

AT AT3G10120

Glyma19g38040

Glutaredoxin PFAM PF00462
GLUTAREDOXIN Panther PTHR10168
Glutaredoxin-related protein KOG KOG2824
protein disulfide oxidoreductase activity PFAM PF00462
GLUTAREDOXIN Panther PTHR10168
Glutaredoxin-related protein KOG KOG2824
Glutaredoxin family protein AT AT5G03870

Glyma19g38060

AT AT3G52710

Glyma19g38070

F-box domain PFAM PF00646
TRANSCRIPTION REGULATION Panther PTHR13980:SF3
SUBFAMILY NOT NAMED Panther PTHR20995:SF4
protein binding PFAM PF00646
TRANSCRIPTION REGULATION Panther PTHR13980:SF3
F-box family protein AT AT1G57790

Glyma19g38085

nucleic acid binding PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) KOG KOG0148
RNA-binding (RRM/RBD/RNP motifs) family protein AT AT3G52660

Glyma19g38100

Replication factor A protein 3 PFAM PF08661
Replication factor A protein 3 PFAM PF08661
Nucleic acid-binding, OB-fold-like protein AT AT4G18590

Glyma19g38105

AT AT3G52620

Glyma19g38110

Signal peptide binding domain PFAM PF02978
GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS Panther PTHR11564
Signal recognition particle, subunit Srp54 KOG KOG0780
SRP54, ffh; signal recognition particle, subunit SRP54 [COG:COG0541 ] KO K03106
chloroplast GO GO:0009507
signal recognition particle, chloroplast targeting GO GO:0080085
protein import into chloroplast thylakoid membrane GO GO:0045038
7S RNA binding GO GO:0008312
chloroplast stroma GO GO:0009570
SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition GO GO:0006617
signal recognition particle, endoplasmic reticulum targeting GO GO:0005786
GTP binding GO GO:0005525
signal sequence binding GO GO:0005048
protein binding GO GO:0005515
mRNA binding GO GO:0003729
SRP-dependent cotranslational protein targeting to membrane PFAM PF02881
cell killing PFAM PF06414
SRP-dependent cotranslational protein targeting to membrane PFAM PF00448
sulfate assimilation PFAM PF01583
CobW/HypB/UreG, nucleotide-binding domain PFAM PF02492
Molybdopterin guanine dinucleotide synthesis protein B PFAM PF03205
CobQ/CobB/MinD/ParA nucleotide binding domain PFAM PF01656
7S RNA binding PFAM PF02978
GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS Panther PTHR11564
Signal recognition particle, subunit Srp54 KOG KOG0780
signal recognition particle subunit SRP54 KO K03106
chloroplast signal recognition particle 54 kDa subunit AT AT5G03940

Glyma19g38120

RhoGAP domain PFAM PF00620
MKIAA1688 PROTEIN Panther PTHR23177
GTPase-activator protein KOG KOG4270
protein binding PFAM PF00786
signal transduction PFAM PF00620
MKIAA1688 PROTEIN Panther PTHR23177
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain AT AT5G22400

Glyma19g38130

LSM domain PFAM PF01423
SMALL NUCLEAR RIBONUCLEOPROTEIN Panther PTHR10553
Small Nuclear ribonucleoprotein G KOG KOG1780
small nuclear ribonucleoprotein G KO K11099
nucleolus GO GO:0005730
small nucleolar ribonucleoprotein complex GO GO:0005732
nucleus GO GO:0005634
molecular_function GO GO:0003674
LSM domain PFAM PF01423
SMALL NUCLEAR RIBONUCLEOPROTEIN Panther PTHR10553
Small Nuclear ribonucleoprotein G KOG KOG1780
small nuclear ribonucleoprotein G KO K11099
probable small nuclear ribonucleoprotein G AT AT2G23930

Glyma19g38140

Auxin responsive protein PFAM PF02519
Auxin responsive protein PFAM PF02519
SAUR-like auxin-responsive protein family AT AT2G36210

Glyma19g38150

Kinesin motor domain PFAM PF00225
KINESIN HEAVY CHAIN Panther PTHR16012
Kinesin-like protein KOG KOG0243
kinesin family member 11 KO K10398
microtubule motor activity PFAM PF00225
KINESIN HEAVY CHAIN Panther PTHR16012
Kinesin-like protein KOG KOG0243
kinesin family member 11 KO K10398
P-loop containing nucleoside triphosphate hydrolases superfamily protein AT AT2G36200

Glyma19g38160

Glycosyl hydrolases family 32 C terminal PFAM PF08244
Beta-fructofuranosidase (invertase) KOG KOG0228
Beta-fructofuranosidase. EC 3.2.1.26
E3.2.1.26, sacA; beta-fructofuranosidase [EC:3.2.1.26 ] [COG:COG1621 ] [GO:0004564 ] KO K01193
Activity=beta-fructofuranosidase; Pathway=sucrose degradation III SoyCyc PWY-621
Activity=beta-fructofuranosidase; Pathway=sucrose degradation III SoyCyc PWY-621
Activity=beta-fructofuranosidase; Pathway=sucrose degradation I SoyCyc SUCUTIL-PWY
Activity=beta-fructofuranosidase; Pathway=fructan biosynthesis SoyCyc PWY-822
Glycosyl hydrolases family 32 N-terminal domain PFAM PF00251
Glycosyl hydrolases family 32 C terminal PFAM PF08244
Beta-fructofuranosidase (invertase) KOG KOG0228
β-fructofuranosidase EC 3.2.1.26
beta-fructofuranosidase [EC:3.2.1.26] KO K01193
cell wall invertase 2 AT AT3G52600

Glyma19g38170

Ribosomal L40e family PFAM PF01020
UBIQUITIN Panther PTHR10666
Ubiquitin/60s ribosomal protein L40 fusion KOG KOG0003
Ubiquitin family PFAM PF00240
protein ubiquitination GO GO:0016567
response to stress GO GO:0006950
proteolysis GO GO:0006508
chromatin organization GO GO:0006325
lipid particle GO GO:0005811
microtubule associated complex GO GO:0005875
regulation of transcription, DNA-dependent GO GO:0006355
ribosome biogenesis GO GO:0042254
cytosolic large ribosomal subunit GO GO:0022625
ubiquitin-dependent protein catabolic process GO GO:0006511
regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle GO GO:0051439
stress-activated MAPK cascade GO GO:0051403
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle GO GO:0051436
positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle GO GO:0051437
nerve growth factor receptor signaling pathway GO GO:0048011
T cell receptor signaling pathway GO GO:0050852
positive regulation of NF-kappaB transcription factor activity GO GO:0051092
innate immune response GO GO:0045087
cellular protein metabolic process GO GO:0044267
positive regulation of I-kappaB kinase/NF-kappaB cascade GO GO:0043123
regulation of apoptosis GO GO:0042981
negative regulation of epidermal growth factor receptor signaling pathway GO GO:0042059
toll-like receptor 4 signaling pathway GO GO:0034142
toll-like receptor 3 signaling pathway GO GO:0034138
toll-like receptor 2 signaling pathway GO GO:0034134
toll-like receptor 1 signaling pathway GO GO:0034130
negative regulation of type I interferon production GO GO:0032480
endocrine pancreas development GO GO:0031018
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process GO GO:0031145
viral transcription GO GO:0019083
endocytic vesicle membrane GO GO:0030666
endosome transport GO GO:0016197
viral infectious cycle GO GO:0019058
mRNA metabolic process GO GO:0016071
cellular membrane organization GO GO:0016044
RNA metabolic process GO GO:0016070
endosome membrane GO GO:0010008
gene expression GO GO:0010467
viral reproduction GO GO:0016032
induction of apoptosis by extracellular signals GO GO:0008624
Toll signaling pathway GO GO:0008063
JNK cascade GO GO:0007254
epidermal growth factor receptor signaling pathway GO GO:0007173
I-kappaB kinase/NF-kappaB cascade GO GO:0007249
translational termination GO GO:0006415
protein modification process GO GO:0006464
apoptosis GO GO:0006915
anti-apoptosis GO GO:0006916
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest GO GO:0006977
translational elongation GO GO:0006414
plasma membrane GO GO:0005886
DNA repair GO GO:0006281
protein binding GO GO:0005515
nucleoplasm GO GO:0005654
cytosol GO GO:0005829
MyD88-independent toll-like receptor signaling pathway GO GO:0002756
MyD88-dependent toll-like receptor signaling pathway GO GO:0002755
toll-like receptor signaling pathway GO GO:0002224
mitotic cell cycle GO GO:0000278
M/G1 transition of mitotic cell cycle GO GO:0000216
S phase of mitotic cell cycle GO GO:0000084
activation of MAPK activity GO GO:0000187
translation GO GO:0006412
cell cycle checkpoint GO GO:0000075
G1/S transition of mitotic cell cycle GO GO:0000082
nucleus GO GO:0005634
cytoplasm GO GO:0005737
ribosome GO GO:0005840
intracellular GO GO:0005622
structural constituent of ribosome GO GO:0003735
Ubiquitin-2 like Rad60 SUMO-like PFAM PF11976
protein binding PFAM PF00240
ribosome PFAM PF01020
UBIQUITIN Panther PTHR10666
Ubiquitin/60s ribosomal protein L40 fusion KOG KOG0003
large subunit ribosomal protein L40e KO K02927
Ubiquitin supergroup;Ribosomal protein L40e AT AT2G36170

Glyma19g38180

alpha/beta hydrolase fold PFAM PF00561
ALPHA/BETA HYDROLASE RELATED Panther PTHR10992
Predicted alpha/beta hydrolase KOG KOG2382
GPI anchor metabolic process PFAM PF07819
alpha/beta hydrolase fold PFAM PF00561
ALPHA/BETA HYDROLASE RELATED Panther PTHR10992
Predicted alpha/beta hydrolase KOG KOG2382
alpha/beta-Hydrolases superfamily protein AT AT3G52570

Glyma19g38190

Protein of unknown function, DUF584 PFAM PF04520
Protein of unknown function, DUF584 PFAM PF04520
Protein of unknown function, DUF584 AT AT3G15040

Glyma19g38201

Glyma19g38211

regulation of transcription, DNA-dependent PFAM PF02365
NAC domain containing protein 61 AT AT3G44350

Glyma19g38220

Vacuolar protein sorting 55 PFAM PF04133
LEPTIN RECEPTOR-RELATED Panther PTHR12050
Leptin receptor gene-related protein KOG KOG2174
vacuole GO GO:0005773
transport GO GO:0006810
transporter activity GO GO:0005215
Vacuolar protein sorting 55 PFAM PF04133
LEPTIN RECEPTOR-RELATED Panther PTHR12050
Leptin receptor gene-related protein KOG KOG2174
Vacuolar protein sorting 55 (VPS55) family protein AT AT3G11530

Glyma19g38241

protein binding PFAM PF00515
Sel1 repeat PFAM PF08238
Tetratricopeptide repeat PFAM PF07719
O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE, OGT Panther PTHR23083
O-linked N-acetylglucosamine transferase OGT KOG KOG4626
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT3G11540

Glyma19g38260

Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PFAM PF00160
CYCLOPHILIN Panther PTHR11071
Cyclophilin type peptidyl-prolyl cis-trans isomerase KOG KOG0881
cellular_component GO GO:0005575
protein folding GO GO:0006457
peptidyl-prolyl cis-trans isomerase activity GO GO:0003755
protein folding PFAM PF00160
CYCLOPHILIN Panther PTHR11071
Cyclophilin type peptidyl-prolyl cis-trans isomerase KOG KOG0881
peptidylprolyl isomerase EC 5.2.1.8
peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8] KO K12733
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein AT AT2G36130

Glyma19g38270

Protein of unknown function (DUF1022) PFAM PF06258
Protein of unknown function (DUF1022) PFAM PF06258
Protein of unknown function (DUF1022) AT AT5G06180

Glyma19g38280

Dcp1-like decapping family PFAM PF06058
DCP1 RELATED Panther PTHR16290
Decapping enzyme complex component DCP1 KOG KOG2868
Dcp1-like decapping family PFAM PF06058
DCP1 RELATED Panther PTHR16290
Decapping enzyme complex component DCP1 KOG KOG2868
decapping 1 AT AT1G08370

Glyma19g38290

F-box family protein AT AT2G27310

Glyma19g38320

embryo defective 2735 AT AT5G06240

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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