Genes Covered By A Chromosome Alteration FN0170255.09.M3.9

Gene Name

Gene Annotation

Glyma17g05260

Plant protein of unknown function (DUF868) PFAM PF05910
Plant protein of unknown function (DUF868) PFAM PF05910
Plant protein of unknown function (DUF868) AT AT2G27770

Glyma17g05270

Ribosomal protein L24e PFAM PF01246
60S RIBOSOMAL PROTEIN L24 Panther PTHR10792
60s ribosomal protein L30 isolog KOG KOG1723
ribosome PFAM PF01246
ribosome Panther PTHR10792
60s ribosomal protein L30 isolog KOG KOG1723
Ribosomal protein L24e family protein AT AT2G44860

Glyma17g05280

Permease family PFAM PF00860
PURINE PERMEASE Panther PTHR11119
Xanthine/uracil transporters KOG KOG1292
transport PFAM PF00860
transport Panther PTHR11119
Xanthine/uracil transporters KOG KOG1292
nucleobase-ascorbate transporter 12 AT AT2G27810

Glyma17g05290

Prephenate dehydratase PFAM PF00800
PREPHENATE DEHYDRATASE (P PROTEIN) Panther PTHR21022
Prephenate dehydratase KOG KOG2797
response to karrikin GO GO:0080167
response to low fluence blue light stimulus by blue low-fluence system GO GO:0010244
cytosol GO GO:0005829
tyrosine biosynthetic process GO GO:0006571
chloroplast GO GO:0009507
arogenate dehydratase activity GO GO:0047769
L-phenylalanine biosynthetic process GO GO:0009094
prephenate dehydratase activity GO GO:0004664
Activity=arogenate dehydratase; Pathway=superpathway of phenylalanine and tyrosine biosynthesis SoyCyc PWY-3481
Activity=arogenate dehydratase; Pathway=phenylalanine biosynthesis II SoyCyc PWY-3462
Activity=arogenate dehydratase; Pathway=phenylalanine biosynthesis II SoyCyc PWY-3462
prephenate dehydratase activity PFAM PF00800
PREPHENATE DEHYDRATASE (P PROTEIN) Panther PTHR21022
Prephenate dehydratase KOG KOG2797
arogenate dehydratase 6 AT AT1G08250

Glyma17g05310

Phytosulfokine precursor protein (PSK) PFAM PF06404
cell proliferation PFAM PF06404
PHYTOSULFOKINE 3 PRECURSOR AT AT3G44735

Glyma17g05320

MORN repeat PFAM PF02493
ALDOSE-1-EPIMERASE Panther PTHR10091
MORN repeat PFAM PF02493
ALDOSE-1-EPIMERASE Panther PTHR10091
MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein AT AT5G22640

Glyma17g05330

AT AT2G27830

Glyma17g05340

histone deacetylase 2C AT AT5G03740

Glyma17g05350

Glycosyl transferase family 2 PFAM PF00535
mannan synthase activity GO GO:0051753
biological_process GO GO:0008150
transferase activity, transferring glycosyl groups GO GO:0016757
Glycosyl transferase family 2 PFAM PF00535
cellulose synthase-like A02 AT AT5G22740

Glyma17g05360

Transmembrane amino acid transporter protein PFAM PF01490
AMINO ACID TRANSPORTER Panther PTHR22950
Amino acid transporters KOG KOG1303
Transmembrane amino acid transporter protein PFAM PF01490
AMINO ACID TRANSPORTER Panther PTHR22950
Amino acid transporters KOG KOG1303
Transmembrane amino acid transporter family protein AT AT1G08230

Glyma17g05370

AMINO ACID TRANSPORTER Panther PTHR22950
Amino acid transporters KOG KOG1303
Transmembrane amino acid transporter protein PFAM PF01490
AMINO ACID TRANSPORTER Panther PTHR22950
Amino acid transporters KOG KOG1303
Transmembrane amino acid transporter family protein AT AT1G08230

Glyma17g05381

Transmembrane amino acid transporter protein PFAM PF01490
AMINO ACID TRANSPORTER Panther PTHR22950
Amino acid transporters KOG KOG1303
Transmembrane amino acid transporter family protein AT AT1G08230

Glyma17g05390

Helicase conserved C-terminal domain PFAM PF00271
ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED Panther PTHR10799
Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily KOG KOG1001
nucleic acid binding PFAM PF08797
ATP binding PFAM PF00176
Zinc finger, C3HC4 type (RING finger) PFAM PF00097
helicase activity PFAM PF00271
ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED Panther PTHR10799
Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily KOG KOG1001
DNA/RNA helicase protein AT AT5G22750

Glyma17g05400

PHD-finger PFAM PF00628
PHD/F-BOX CONTAINING PROTEIN Panther PTHR23123
Nucleosome remodeling factor, subunit NURF301/BPTF KOG KOG1473
DDT domain PFAM PF02791
protein binding PFAM PF00628
PHD/F-BOX CONTAINING PROTEIN Panther PTHR23123
Nucleosome remodeling factor, subunit NURF301/BPTF KOG KOG1473
metalloendopeptidases;zinc ion binding;DNA binding AT AT5G35210

Glyma17g05410

Alpha adaptin AP2, C-terminal domain PFAM PF02296
ADAPTIN, ALPHA/GAMMA/EPSILON Panther PTHR22780
Vesicle coat complex AP-2, alpha subunit KOG KOG1077
plasma membrane GO GO:0005886
membrane GO GO:0016020
protein transporter activity GO GO:0008565
protein transport GO GO:0015031
vesicle-mediated transport GO GO:0016192
binding GO GO:0005488
intracellular protein transport GO GO:0006886
protein binding GO GO:0005515
membrane coat PFAM PF01602
vesicle-mediated transport PFAM PF02883
vesicle-mediated transport PFAM PF02296
ADAPTIN, ALPHA/GAMMA/EPSILON Panther PTHR22780
Vesicle coat complex AP-2, alpha subunit KOG KOG1077
AP-2 complex subunit alpha KO K11824
Adaptor protein complex AP-2, alpha subunit AT AT5G22780

Glyma17g05420

Domain of unknown function (DUF3411) PFAM PF11891
reticulata-related 1 AT AT5G22790

Glyma17g05430

NPH3 family PFAM PF03000
response to light stimulus PFAM PF03000
Phototropic-responsive NPH3 family protein AT AT3G44820

Glyma17g05440

NAD dependent epimerase/dehydratase family PFAM PF01370
NAD DEPENDENT EPIMERASE/DEHYDRATASE Panther PTHR10366
Activity=UDP-glucuronate decarboxylase; Pathway=UDP-sugars interconversion SoyCyc PWY-5114
Activity=UDP-glucuronate decarboxylase; Pathway=UDP-D-xylose and UDP-D-glucuronate biosynthesis SoyCyc PWY-4821
Activity=UDP-glucuronate decarboxylase; Pathway=UDP-D-xylose biosynthesis SoyCyc PWY-4821
Activity=UDP-glucuronate decarboxylase; Pathway=UDP-sugars interconversion SoyCyc PWY-5114
coenzyme binding PFAM PF01370
NAD DEPENDENT EPIMERASE/DEHYDRATASE Panther PTHR10366
UDP-D-apiose/UDP-D-xylose synthase 2 AT AT1G08200

Glyma17g05450

GDSL-like Lipase/Acylhydrolase PFAM PF00657
ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Panther PTHR22835:SF27
lipid metabolic process PFAM PF00657
ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Panther PTHR22835:SF27
GDSL-like Lipase/Acylhydrolase superfamily protein AT AT5G22810

Glyma17g05460

SUBFAMILY NOT NAMED Panther PTHR23424:SF1
SUBFAMILY NOT NAMED Panther PTHR23424:SF1
ARM repeat superfamily protein AT AT5G22820

Glyma17g05471

metal ion transport PFAM PF01544
RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL Panther PTHR13890
Magnesium transporters: CorA family KOG KOG2662
magnesium (Mg) transporter 10 AT AT5G22830

Glyma17g05480

Protein kinase domain PFAM PF00069
CDC2-RELATED KINASE Panther PTHR11295
Serine/threonine protein kinase KOG KOG1290
non-specific serine/threonine protein kinase EC 2.7.11.1
serine/threonine kinase 23 [EC:2.7.11.1] KO K08832
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
CDC2-RELATED KINASE Panther PTHR11295
Serine/threonine protein kinase KOG KOG1290
Phosphotransferases with an alcohol group as acceptor. EC 2.7.1.-
phosphatidylinositol-4-phosphate 3-kinase [EC:2.7.1.154] KO K00924
Protein kinase superfamily protein AT AT3G44850

Glyma17g05490

ASPARTYL PROTEASES Panther PTHR13683
Aspartyl protease KOG KOG1339
E2.7.1.-; [EC:2.7.1.- ] [COG:COG0515 COG1493 ] KO K00924
aspartic-type endopeptidase activity PFAM PF00026
aspartic-type endopeptidase activity Panther PTHR13683
Aspartyl protease KOG KOG1339
Phosphotransferases with an alcohol group as acceptor. EC 2.7.1.-
phosphatidylinositol-4-phosphate 3-kinase [EC:2.7.1.154] KO K00924
Eukaryotic aspartyl protease family protein AT AT5G22850

Glyma17g05500

Terpene synthase family, metal binding domain PFAM PF03936
sabinene-hydrate synthase EC 4.2.3.11
1,8-cineole synthase [EC:4.2.3.-] KO K07385
Activity=(E,E)-α-farnesene_synthase; Pathway=monoterpene biosynthesis SoyCyc PWY-3041
Activity=(E,E)-α-farnesene_synthase; Pathway=farnesene biosynthesis SoyCyc PWY-5725
lyase activity PFAM PF01397
lyase activity PFAM PF03936
terpene synthase 03 AT AT4G16740

Glyma17g05510

Serine carboxypeptidase PFAM PF00450
SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE Panther PTHR11802
Serine carboxypeptidases KOG KOG1283
serine-type carboxypeptidase activity PFAM PF00450
serine-type carboxypeptidase activity Panther PTHR11802
serine carboxypeptidase-like 51 AT AT2G27920

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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