Genes Covered By A Chromosome Alteration FN0170255.09.M3.8

Gene Name

Gene Annotation

Glyma15g42030

DIL domain PFAM PF01843
MYOSIN Panther PTHR13140
Myosin class V heavy chain KOG KOG0160
myosin complex PFAM PF02736
myosin complex PFAM PF00063
protein binding PFAM PF00612
DIL domain PFAM PF01843
MYOSIN Panther PTHR13140
Myosin class V heavy chain KOG KOG0160
myosin-like protein XIF AT AT2G31900

Glyma15g42040

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
protein phosphorylation PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine-rich repeat protein kinase family protein AT AT1G51800

Glyma15g42050

No apical meristem (NAM) protein PFAM PF02365
regulation of transcription, DNA-dependent PFAM PF02365
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein AT AT1G79580

Glyma15g42060

AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT Panther PTHR13780
protein binding PFAM PF00571
AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT Panther PTHR13780
homolog of yeast sucrose nonfermenting 4 AT AT1G09020

Glyma15g42080

Glutamine amidotransferase class-I PFAM PF00117
CTP SYNTHASE Panther PTHR11550
CTP synthase (UTP-ammonia lyase) KOG KOG2387
CTP synthase. EC 6.3.4.2
E6.3.4.2, pyrG; CTP synthase [EC:6.3.4.2 ] [COG:COG0504 ] [GO:0003883 ] KO K01937
pyrimidine nucleotide biosynthetic process GO GO:0006221
CTP synthase activity GO GO:0003883
catalytic activity GO GO:0003824
Activity=CTP synthase; Pathway=pyrimidine ribonucleotides interconversion SoyCyc PWY-5687
Activity=CTP synthase; Pathway=pyrimidine ribonucleotides de novo biosynthesis SoyCyc PWY0-162
Activity=CTP synthase; Pathway=pyrimidine ribonucleotides interconversion SoyCyc PWY-5687
CTP synthase activity PFAM PF06418
Glutamine amidotransferase class-I PFAM PF00117
glutamine metabolic process PFAM PF07722
CTP SYNTHASE Panther PTHR11550
CTP synthase (UTP-ammonia lyase) KOG KOG2387
CTP synthase EC 6.3.4.2
CTP synthase [EC:6.3.4.2] KO K01937
CTP synthase family protein AT AT3G12670

Glyma15g42100

Isocitrate/isopropylmalate dehydrogenase PFAM PF00180
NADP-SPECIFIC ISOCITRATE DEHYDROGENASE Panther PTHR11822
NADP-dependent isocitrate dehydrogenase KOG KOG1526
Isocitrate dehydrogenase (NADP+). EC 1.1.1.42
E1.1.1.42, icd; isocitrate dehydrogenase [EC:1.1.1.42 ] [COG:COG0538 ] [GO:0004450 ] KO K00031
oxidation-reduction process GO GO:0055114
peroxisome GO GO:0005777
NAD binding GO GO:0051287
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO GO:0016616
magnesium ion binding GO GO:0000287
defense response to bacterium GO GO:0042742
NADP metabolic process GO GO:0006739
isocitrate metabolic process GO GO:0006102
cytosol GO GO:0005829
response to zinc ion GO GO:0010043
apoplast GO GO:0048046
response to salt stress GO GO:0009651
plasma membrane GO GO:0005886
copper ion binding GO GO:0005507
metabolic process GO GO:0008152
response to cadmium ion GO GO:0046686
isocitrate dehydrogenase (NADP+) activity GO GO:0004450
Activity=isocitrate_dehydrogenase_(NADP)_cytoplasmic; Pathway=glutamine biosynthesis III SoyCyc PWY-6549
Isocitrate/isopropylmalate dehydrogenase PFAM PF00180
isocitrate metabolic process Panther PTHR11822
NADP-dependent isocitrate dehydrogenase KOG KOG1526
isocitrate dehydrogenase (NADP+) EC 1.1.1.42
isocitrate dehydrogenase [EC:1.1.1.42] KO K00031
cytosolic NADP+-dependent isocitrate dehydrogenase AT AT1G65930

Glyma15g42115

protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE/THREONINE PROTEIN KINASE Panther PTHR22985
Putative serine/threonine protein kinase KOG KOG0610
AGC kinase 1.7 AT AT1G79250

Glyma15g42130

FAMILY NOT NAMED Panther PTHR15854
Domain of unknown function (DUF1794) PFAM PF08768
Uncharacterized conserved protein KOG KOG3371
Domain of unknown function (DUF1794) PFAM PF08768
THAP4 PROTEIN Panther PTHR15854
Uncharacterized conserved protein KOG KOG3371
AT AT1G79260

Glyma15g42140

ATP-CITRATE SYNTHASE Panther PTHR23118
ATP-citrate lyase KOG KOG1254
leaf development GO GO:0048366
positive regulation of cell size GO GO:0045793
regulation of embryonic development GO GO:0045995
starch biosynthetic process GO GO:0019252
anthocyanin accumulation in tissues in response to UV light GO GO:0043481
chlorophyll biosynthetic process GO GO:0015995
carotenoid biosynthetic process GO GO:0016117
wax biosynthetic process GO GO:0010025
positive regulation of flower development GO GO:0009911
aging GO GO:0007568
fatty acid biosynthetic process GO GO:0006633
citrate lyase complex GO GO:0009346
acetyl-CoA biosynthetic process GO GO:0006085
cytosol GO GO:0005829
ATP citrate synthase activity GO GO:0003878
Activity=ATP citrate synthase; Pathway=acetyl-CoA biosynthesis III (from citrate) SoyCyc PWY-5172
Activity=ATP citrate synthase; Pathway=superpathway of acetyl-CoA biosynthesis SoyCyc PWY-5173
Activity=ATP citrate synthase; Pathway=superpathway of acetyl-CoA biosynthesis SoyCyc PWY-5173
Activity=ATP citrate synthase; Pathway=acetyl-CoA biosynthesis from citrate SoyCyc PWY-5172
ATP-grasp domain PFAM PF08442
ATP-CITRATE SYNTHASE Panther PTHR23118
ATP-citrate lyase KOG KOG1254
ATP citrate synthase EC 2.3.3.8
ATP citrate (pro-S)-lyase [EC:2.3.3.8] KO K01648
ATP-citrate lyase A-1 AT AT1G10670

Glyma15g42150

Ribosomal protein S2 PFAM PF00318
RIBOSOMAL PROTEIN S2, EUKARYOTIC AND ARCHAEAL FORM Panther PTHR11489
40S ribosomal protein SA (P40)/Laminin receptor 1 KOG KOG0830
intracellular PFAM PF00318
small ribosomal subunit Panther PTHR11489
40S ribosomal protein SA (P40)/Laminin receptor 1 KOG KOG0830
40s ribosomal protein SA B AT AT3G04770

Glyma15g42160

Plant protein of unknown function (DUF946) PFAM PF06101
PRE-MRNA PROCESSING PROTEIN PRP39-RELATED Panther PTHR17204
Plant protein of unknown function (DUF946) PFAM PF06101
PRE-MRNA PROCESSING PROTEIN PRP39-RELATED Panther PTHR17204
Plant protein of unknown function (DUF946) AT AT2G44260

Glyma15g42170

Plant protein of unknown function (DUF946) PFAM PF06101
PRE-MRNA PROCESSING PROTEIN PRP39-RELATED Panther PTHR17204
Plant protein of unknown function (DUF946) PFAM PF06101
PRE-MRNA PROCESSING PROTEIN PRP39-RELATED Panther PTHR17204
Plant protein of unknown function (DUF946) AT AT2G44260

Glyma15g42181

Domain of unknown function (DUF966) PFAM PF06136
Domain of unknown function (DUF966) AT AT1G05577

Glyma15g42190

Plant protein of unknown function (DUF936) PFAM PF06075
Plant protein of unknown function (DUF936) PFAM PF06075
Plant protein of unknown function (DUF936) AT AT2G31920

Glyma15g42200

Glyma15g42210

Predicted sugar transporter KOG KOG4830
Predicted sugar transporter KOG KOG4830
Major facilitator superfamily protein AT AT2G44280

Glyma15g42220

AT AT2G31940

Glyma15g42240

ATPase family associated with various cellular activities (AAA) PFAM PF00004
BCS1 AAA-TYPE ATPASE Panther PTHR23070
AAA+-type ATPase KOG KOG0743
ATP binding PFAM PF00004
BCS1 AAA-TYPE ATPASE Panther PTHR23070
AAA+-type ATPase KOG KOG0743
P-loop containing nucleoside triphosphate hydrolases superfamily protein AT AT5G57480

Glyma15g42250

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
RING ZINC FINGER PROTEIN Panther PTHR22763
Zinc finger, C3HC4 type (RING finger) PFAM PF00097
RING ZINC FINGER PROTEIN Panther PTHR22763
RING/U-box superfamily protein AT AT3G60080

Glyma15g42260

AT AT2G31945

Glyma15g42280

VQ motif PFAM PF05678
VQ motif PFAM PF05678
VQ motif-containing protein AT AT3G58000
VQ motif-containing protein AT AT2G42140

Glyma15g42290

Molybdenum Cofactor Synthesis C PFAM PF06463
MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN A Panther PTHR22960
Molybdenum cofactor biosynthesis pathway protein KOG KOG2876
iron-sulfur cluster binding PFAM PF04055
molybdopterin synthase complex PFAM PF06463
MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN A Panther PTHR22960
Molybdenum cofactor biosynthesis pathway protein KOG KOG2876
molybdenum cofactor biosynthesis protein KO K03639
cofactor of nitrate reductase and xanthine dehydrogenase 2 AT AT2G31955

Glyma15g42301

cellular carbohydrate metabolic process PFAM PF00285
cellular carbohydrate metabolic process Panther PTHR11739
Citrate synthase KOG KOG2617
citrate (Si)-synthase EC 2.3.3.1
citrate synthase [EC:2.3.3.1] KO K01647
Citrate synthase family protein AT AT2G44350

Glyma15g42310

PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT1G03510

Glyma15g42320

biological_process GO GO:0008150
molecular_function GO GO:0003674
AT AT2G44360

Glyma15g42330

1,3-beta-glucan synthase component PFAM PF02364
1,3-beta-glucan synthase/callose synthase catalytic subunit KOG KOG0916
Hexosyltransferases. EC 2.4.1.-
callose synthase [EC:2.4.1.-] KO K11000
Vta1 like PFAM PF04652
1,3-beta-D-glucan synthase complex PFAM PF02364
1,3-beta-glucan synthase/callose synthase catalytic subunit KOG KOG0916
Hexosyltransferases. EC 2.4.1.-
callose synthase [EC:2.4.1.-] KO K11000
glucan synthase-like 3 AT AT2G31960

Glyma15g42340

PRLI-interacting factor, putative AT AT5G19900

Glyma15g42380

Homeobox associated leucine zipper PFAM PF02183
HOMEOBOX PROTEIN Panther PTHR19418
Transcription factor HEX, contains HOX and HALZ domains KOG KOG0483
sequence-specific DNA binding PFAM PF00046
nucleus PFAM PF02183
HOMEOBOX PROTEIN Panther PTHR19418
Transcription factor HEX, contains HOX and HALZ domains KOG KOG0483
homeobox from Arabidopsis thaliana AT AT5G06710

Glyma15g42385

proline-rich family protein AT AT2G32840

Glyma15g42390

Retrotransposon gag protein PFAM PF03732
'chromo' (CHRromatin Organisation MOdifier) domain PFAM PF00385

Glyma15g42405

AT AT3G14750

Glyma15g42420

Glycosyl hydrolases family 28 PFAM PF00295
polygalacturonase activity PFAM PF00295
glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein AT AT2G33160

Glyma15g42430

RNA polymerase Rpb8 PFAM PF03870
DNA-DIRECTED RNA POLYMERASE SUBUNIT RPB8 Panther PTHR10917
RNA polymerase subunit 8 KOG KOG3400
transcription, DNA-dependent PFAM PF03870
transcription, DNA-dependent Panther PTHR10917
RNA polymerase subunit 8 KOG KOG3400
RNA polymerase Rpb8 AT AT3G59600

Glyma15g42440

Bromodomain PFAM PF00439
FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS Panther PTHR22880
Myb-like DNA-binding domain PFAM PF00249
protein binding PFAM PF00439
FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS Panther PTHR22880
DNA-binding bromodomain-containing protein AT AT2G44430

Glyma15g42450

ENT domain PFAM PF03735
Uncharacterized conserved protein, contains ENT domain KOG KOG4675
ENT domain PFAM PF03735
Uncharacterized conserved protein, contains ENT domain KOG KOG4675
Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein AT AT5G13020

Glyma15g42460

Protein kinase domain PFAM PF00069
SERINE/THREONINE PROTEIN KINASE Panther PTHR22967
ARK protein kinase family KOG KOG1989
non-specific serine/threonine protein kinase EC 2.7.11.1
AP2-associated kinase [EC:2.7.11.1] KO K08853
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE/THREONINE PROTEIN KINASE Panther PTHR22967
ARK protein kinase family KOG KOG1989
non-specific serine/threonine protein kinase EC 2.7.11.1
AP2-associated kinase [EC:2.7.11.1] KO K08853
Protein kinase superfamily protein AT AT2G32850

Glyma15g42480

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Vacuolar sorting protein 9 (VPS9) domain AT AT5G09320

Glyma15g42490

Glyma15g42500

Glyma15g42510

Tetrapyrrole (Corrin/Porphyrin) Methylases PFAM PF00590
METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED Panther PTHR21091
Uroporphyrin-III C-methyltransferase. EC 2.1.1.107
CYSG1, cysG, cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107 ] [COG:COG0007 ] [GO:0004851 ] KO K02302
Activity=uroporphyrin-III C-methyltransferase; Pathway=siroheme biosynthesis SoyCyc PWY-5194
Activity=uroporphyrin-III C-methyltransferase; Pathway=adenosylcobalamin biosynthesis II late cobalt incorporation SoyCyc P381-PWY
Activity=uroporphyrin-III C-methyltransferase; Pathway=siroheme biosynthesis SoyCyc PWY-5194
Activity=uroporphyrin-III C-methyltransferase; Pathway=adenosylcobalamin biosynthesis I early cobalt insertion SoyCyc PWY-5507
methyltransferase activity PFAM PF00590
METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED Panther PTHR21091
Uroporphyrin III methyltransferase KOG KOG1527
urophorphyrin methylase 1 AT AT5G40850

Glyma15g42540

Plant protein family PFAM PF03138
GDP-fucose protein O-fucosyltransferase PFAM PF10250
O-fucosyltransferase family protein AT AT2G44500

Glyma15g42551

protein phosphorylation PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE Panther PTHR23257
Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs KOG KOG0192
Protein kinase superfamily protein AT AT5G58950

Glyma15g42561

sucrose metabolic process PFAM PF00862
SUCROSE SYNTHASE Panther PTHR12526:SF27
sucrose synthase 3 AT AT4G02280

Glyma15g42570

Glycosyl hydrolase family 1 PFAM PF00232
GLYCOSIDE HYDROLASES Panther PTHR10353
Beta-glucosidase, lactase phlorizinhydrolase, and related proteins KOG KOG0626
Activity=beta-primeverosidase; Pathway=linamarin degradation SoyCyc PWY-3121
Activity=beta-primeverosidase; Pathway=lotaustralin degradation SoyCyc PWY-6002
hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF00232
hydrolase activity, hydrolyzing O-glycosyl compounds Panther PTHR10353
Beta-glucosidase, lactase phlorizinhydrolase, and related proteins KOG KOG0626
beta glucosidase 17 AT AT2G44480

Glyma15g42590

Glycosyl hydrolase family 1 PFAM PF00232
GLYCOSIDE HYDROLASES Panther PTHR10353
Beta-glucosidase, lactase phlorizinhydrolase, and related proteins KOG KOG0626
Beta-glucosidase. EC 3.2.1.21
E3.2.1.21; beta-glucosidase [EC:3.2.1.21 ] [GO:0008422 ] KO K01188
Activity=beta-primeverosidase; Pathway=linamarin degradation SoyCyc PWY-3121
Activity=beta-primeverosidase; Pathway=lotaustralin degradation SoyCyc PWY-6002
hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF00232
hydrolase activity, hydrolyzing O-glycosyl compounds Panther PTHR10353
Beta-glucosidase, lactase phlorizinhydrolase, and related proteins KOG KOG0626
beta glucosidase 17 AT AT2G44480

Glyma15g42601

protein phosphorylation PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE Panther PTHR23257
Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs KOG KOG0192
Protein kinase superfamily protein AT AT5G58950

Glyma15g42610

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
Splicing factor 3b, subunit 4 KOG KOG0131
nucleic acid binding PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
Splicing factor 3b, subunit 4 KOG KOG0131
RNA-binding (RRM/RBD/RNP motifs) family protein AT AT3G52150

Glyma15g42620

Ribosomal protein L6e PFAM PF01159
60S RIBOSOMAL PROTEIN L6 Panther PTHR10715
60s ribosomal protein L6 KOG KOG1694
RP-L6e, RPL6; large subunit ribosomal protein L6e [GO:0005842 ] KO K02934
membrane GO GO:0016020
protein binding GO GO:0005515
plasma membrane GO GO:0005886
cytosolic large ribosomal subunit GO GO:0022625
cytosolic ribosome GO GO:0022626
nucleolus GO GO:0005730
translation GO GO:0006412
ribosome GO GO:0005840
intracellular GO GO:0005622
structural constituent of ribosome GO GO:0003735
intracellular PFAM PF03868
intracellular PFAM PF01159
intracellular Panther PTHR10715
60s ribosomal protein L6 KOG KOG1694
Ribosomal protein L6 family protein AT AT1G74060

Glyma15g42630

Plant phosphoribosyltransferase C-terminal PFAM PF08372
SYNAPTOTAGMIN Panther PTHR10024
Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis KOG KOG1028
protein binding PFAM PF00168
Plant phosphoribosyltransferase C-terminal PFAM PF08372
SYNAPTOTAGMIN Panther PTHR10024
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein AT AT5G06850

Glyma15g42640

DnaJ C terminal region PFAM PF01556
DNAJ/HSP40 Panther PTHR11821
Molecular chaperone (DnaJ superfamily) KOG KOG0715
heat shock protein binding PFAM PF00226
heat shock protein binding PFAM PF00684
protein folding PFAM PF01556
DNAJ/HSP40 Panther PTHR11821
Molecular chaperone (DnaJ superfamily) KOG KOG0715
gametophytic factor 2 AT AT5G48030

Glyma15g42651

Protease inhibitor/seed storage/LTP family PFAM PF00234
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein AT AT3G52130

Glyma15g42660

Eukaryotic protein of unknown function (DUF953) PFAM PF06110
FAMILY NOT NAMED Panther PTHR12452
Uncharacterized conserved protein KOG KOG3425
Eukaryotic protein of unknown function (DUF953) PFAM PF06110
42-9-9 PROTEIN-RELATED Panther PTHR12452
Uncharacterized conserved protein KOG KOG3425
Thioredoxin superfamily protein AT AT5G42850

Glyma15g42670

Tetratricopeptide repeat PFAM PF00515
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT (EIF-3) Panther PTHR12601
Uncharacterized protein CLU1/cluA/TIF31 involved in mitochondrial morphology/distribution, also found associated with eIF-3 KOG KOG1839
Protein of unknown function (DUF727) PFAM PF05303
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT (EIF-3) Panther PTHR12601
Uncharacterized protein CLU1/cluA/TIF31 involved in mitochondrial morphology/distribution, also found associated with eIF-3 KOG KOG1839
tetratricopeptide repeat (TPR)-containing protein AT AT3G52140

Glyma15g42680

Helix-loop-helix DNA-binding domain PFAM PF00010
transcription regulator activity PFAM PF00010
basic helix-loop-helix (bHLH) DNA-binding superfamily protein AT AT2G42280

Glyma15g42690

G-patch domain PFAM PF01585
ARGININE/SERINE RICH SPLICING FACTOR SF4/14 Panther PTHR23340
RNA processing PFAM PF01805
nucleic acid binding PFAM PF01585
ARGININE/SERINE RICH SPLICING FACTOR SF4/14 Panther PTHR23340
SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein AT AT3G52120

Glyma15g42710

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT5G40410

Glyma15g42725

Glyma15g42740

AN1-like Zinc finger PFAM PF01428
PRK1-ASSOCIATED ZINC FINGER PROTEIN Panther PTHR10634
Predicted Zn-finger protein KOG KOG3173
zinc ion binding PFAM PF01754
zinc ion binding PFAM PF01428
PRK1-ASSOCIATED ZINC FINGER PROTEIN Panther PTHR10634
Predicted Zn-finger protein KOG KOG3173
A20/AN1-like zinc finger family protein AT AT3G12630

Glyma15g42750

Zinc finger C-x8-C-x5-C-x3-H type (and similar) PFAM PF00642
MAKORIN Panther PTHR11224
Predicted E3 ubiquitin ligase KOG KOG1039
nucleic acid binding PFAM PF00642
Zinc finger, C3HC4 type (RING finger) PFAM PF00097
MAKORIN Panther PTHR11224
Predicted E3 ubiquitin ligase KOG KOG1039
zinc finger (CCCH-type/C3HC4-type RING finger) family protein AT AT3G08505

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PFAM PF00076
POLY-A BINDING PROTEIN 2 Panther PTHR23365
Nuclear polyadenylated RNA binding protein KOG KOG3702
mRNA processing PFAM PF01480
nucleic acid binding PFAM PF00076
POLY-A BINDING PROTEIN 2 Panther PTHR23365
Nuclear polyadenylated RNA binding protein KOG KOG3702
RNA binding (RRM/RBD/RNP motifs) family protein AT AT3G12640

Glyma15g42820

Zinc finger C-x8-C-x5-C-x3-H type (and similar) PFAM PF00642
MAKORIN Panther PTHR11224
Predicted E3 ubiquitin ligase KOG KOG1039
nucleic acid binding PFAM PF00642
Zinc finger, C3HC4 type (RING finger) PFAM PF00097
MAKORIN Panther PTHR11224
Predicted E3 ubiquitin ligase KOG KOG1039
zinc finger (CCCH-type/C3HC4-type RING finger) family protein AT AT3G08505

Glyma15g42850

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT3G57430

Glyma15g42860

oxygen evolving complex PFAM PF01789
Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein AT AT3G63540

Glyma15g42870

Zinc finger, C2H2 type PFAM PF00096
ZINC FINGER PROTEIN Panther PTHR11389
ZINC FINGER PROTEIN Panther PTHR11389
C2H2-type zinc finger family protein AT AT3G57670

Glyma15g42880

AT AT2G26840

Glyma15g42900

Mitochondrial carrier protein PFAM PF00153
MITOCHONDRIAL CARRIER PROTEIN RELATED Panther PTHR11896
Mitochondrial ADP/ATP carrier proteins KOG KOG0749
plasma membrane GO GO:0005886
cell wall GO GO:0005618
nucleolus GO GO:0005730
copper ion binding GO GO:0005507
vacuole GO GO:0005773
protein binding GO GO:0005515
membrane GO GO:0016020
vacuolar membrane GO GO:0005774
chloroplast GO GO:0009507
mitochondrion GO GO:0005739
chloroplast envelope GO GO:0009941
purine nucleotide transport GO GO:0015865
transport GO GO:0006810
mitochondrial envelope GO GO:0005740
mitochondrial inner membrane GO GO:0005743
binding GO GO:0005488
ATP:ADP antiporter activity GO GO:0005471
Mitochondrial carrier protein PFAM PF00153
MITOCHONDRIAL CARRIER PROTEIN RELATED Panther PTHR11896
Mitochondrial ADP/ATP carrier proteins KOG KOG0749
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator) KO K05863
ADP/ATP carrier 2 AT AT5G13490

Glyma15g42920

AT AT3G52110

Glyma15g42930

AT AT3G52105

Glyma15g42940

ATP synthase delta (OSCP) subunit PFAM PF00213
ATP SYNTHASE DELTA CHAIN Panther PTHR11910
Mitochondrial F1F0-ATP synthase, subunit OSCP/ATP5 KOG KOG1662
H(+)-transporting two-sector ATPase. EC 3.6.3.14
ATPeF1O, ATP5O; F-type H+-transporting ATPase oligomycin sensitivity conferral protein [EC:3.6.3.14 ] [COG:COG0712 ] [GO:0003936 ] KO K02137
proton-transporting ATP synthase complex, catalytic core F(1) PFAM PF00213
proton-transporting ATP synthase complex, catalytic core F(1) Panther PTHR11910
Mitochondrial F1F0-ATP synthase, subunit OSCP/ATP5 KOG KOG1662
H+-transporting two-sector ATPase EC 3.6.3.14
F-type H+-transporting ATPase oligomycin sensitivity conferral protein [EC:3.6.3.14] KO K02137
delta subunit of Mt ATP synthase AT AT5G13450

Glyma15g42955

RNA-directed DNA polymerase activity PFAM PF12009
RNA-dependent DNA replication PFAM PF00078
TELOMERASE REVERSE TRANSCRIPTASE Panther PTHR12066
Telomerase catalytic subunit/reverse transcriptase TERT KOG KOG1005
RNA-directed DNA polymerase EC 2.7.7.49
telomerase reverse transcriptase [EC:2.7.7.49] KO K11126
telomerase reverse transcriptase AT AT5G16850

Glyma15g42970

Pathogenesis-related protein Bet v I family PFAM PF00407
response to biotic stimulus PFAM PF00407
Polyketide cyclase/dehydrase and lipid transport superfamily protein AT AT5G28010

Glyma15g42980

Pathogenesis-related protein Bet v I family PFAM PF00407
response to biotic stimulus PFAM PF00407
MLP-like protein 28 AT AT1G70830

Glyma15g43000

Harpin-induced protein 1 (Hin1) PFAM PF07320
AT AT3G08490

Glyma15g43010

GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN Panther PTHR11697
GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN Panther PTHR11697
TTF-type zinc finger protein with HAT dimerisation domain AT AT1G19260

Glyma15g43021

antiporter activity PFAM PF01554
antiporter activity Panther PTHR11206
Uncharacterized membrane protein, predicted efflux pump KOG KOG1347
MATE efflux family protein AT AT3G08040

Glyma15g43030

Zinc finger C-x8-C-x5-C-x3-H type (and similar) PFAM PF00642
ANKYRIN REPEAT-CONTAINING Panther PTHR18958
CCCH-type Zn-finger protein KOG KOG1595
protein binding PFAM PF00023
nucleic acid binding PFAM PF00642
UNKEMPT-RELATED Panther PTHR14493
CCCH-type Zn-finger protein KOG KOG1595
CCCH-type zinc finger protein with ARM repeat domain AT AT2G41900

Glyma15g43040

Cellulose synthase PFAM PF03552
SUBFAMILY NOT NAMED Panther PTHR13301:SF1
Cellulose synthase (UDP-forming). EC 2.4.1.12
cellulose synthase A [EC:2.4.1.12] KO K10999
Golgi apparatus GO GO:0005794
cellulose biosynthetic process GO GO:0030244
defense response GO GO:0006952
primary cell wall biogenesis GO GO:0009833
plasma membrane GO GO:0005886
cellulose synthase activity GO GO:0016759
transferase activity, transferring glycosyl groups GO GO:0016757
Activity=1,4-beta-D-xylan synthase, cellulose synthase; Pathway=cellulose biosynthesis SoyCyc PWY-1001
Activity=1,4-beta-D-xylan synthase, cellulose synthase; Pathway=xylan biosynthesis SoyCyc PWY-5800
Activity=1,4-beta-D-xylan synthase; Pathway=xylan biosynthesis SoyCyc PWY-5800
Activity=1,4-beta-D-xylan synthase; Pathway=cellulose biosynthesis SoyCyc PWY-1001
cellulose synthase (UDP-forming) activity PFAM PF03552
SUBFAMILY NOT NAMED Panther PTHR13301:SF1
cellulose synthase (UDP-forming) EC 2.4.1.12
cellulose synthase A [EC:2.4.1.12] KO K10999
Cellulose synthase family protein AT AT5G05170

Glyma15g43050

Brain and reproductive organ-expressed protein (BRE) PFAM PF06113
AT AT5G42470

Glyma15g43065

transmembrane transport PFAM PF08449
membrane PFAM PF00892
Triose-phosphate Transporter family PFAM PF03151
SOLUTE CARRIER FAMILY 35 Panther PTHR11132
Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter KOG KOG1441
Nucleotide/sugar transporter family protein AT AT5G17630

Glyma15g43080

Glycosyl hydrolases family 28 PFAM PF00295
polygalacturonase activity PFAM PF00295
Pectin lyase-like superfamily protein AT AT3G07970

Glyma15g43090

Actin PFAM PF00022
ACTIN Panther PTHR11937
Actin and related proteins KOG KOG0676
Actin PFAM PF00022
PFAM PF02491
ACTIN Panther PTHR11937
Actin and related proteins KOG KOG0676
actin-related protein 7 AT AT3G60830

Glyma15g43100

Photosystem II 5 kD protein AT AT1G51400

Glyma15g43110

Photosystem II 5 kD protein AT AT1G51400

Glyma15g43150

Protein of unknown function (DUF1092) PFAM PF06485
Protein of unknown function (DUF1092) PFAM PF06485
RNA binding AT AT3G08010

Glyma15g43170

DNA gyrase/topoisomerase IV, subunit A PFAM PF00521
DNA TOPOISOMERASE/GYRASE Panther PTHR10169
DNA topoisomerase type II KOG KOG0355
DNA topoisomerase (ATP-hydrolysing). EC 5.99.1.3
TOP2; DNA topoisomerase II [EC:5.99.1.3 ] [COG:COG0187 COG0188 ] [GO:0003916 0003918 ] KO K03164
ATP binding PFAM PF02518
chromosome PFAM PF00204
chromosome PFAM PF00521
DNA TOPOISOMERASE/GYRASE Panther PTHR10169
DNA topoisomerase type II KOG KOG0355
DNA topoisomerase (ATP-hydrolysing) EC 5.99.1.3
DNA topoisomerase II [EC:5.99.1.3] KO K03164
topoisomerase II AT AT3G23890

Glyma15g43180

Protein of unknown function, DUF642 PFAM PF04862
Protein of unknown function, DUF642 PFAM PF04862
Protein of unknown function, DUF642 AT AT3G08030

Glyma15g43191

AT AT1G35430

Glyma15g43200

Sterol methyltransferase C-terminal PFAM PF08498
METHYLTRANSFERASE Panther PTHR10108
SAM-dependent methyltransferases KOG KOG1269
Delta(24)-sterol C-methyltransferase. EC 2.1.1.41
sterol 24-C-methyltransferase [EC:2.1.1.41] KO K00559
vacuole GO GO:0005773
sterol biosynthetic process GO GO:0016126
embryo development ending in seed dormancy GO GO:0009793
sterol 24-C-methyltransferase activity GO GO:0003838
Activity=sterol 24-C-methyltransferase; Pathway=plant sterol biosynthesis SoyCyc PWY-2541
Activity=sterol 24-C-methyltransferase; Pathway=sitosterol biosynthesis SoyCyc PWY-6424
Activity=sterol 24-C-methyltransferase; Pathway=plant sterol biosynthesis SoyCyc PWY-2541
Activity=sterol 24-C-methyltransferase; Pathway=ergosterol biosynthesis SoyCyc ERGOSTEROL-SYN-PWY
lipid biosynthetic process PFAM PF02353
methyltransferase activity PFAM PF01209
methyltransferase activity PFAM PF08241
steroid biosynthetic process PFAM PF08498
METHYLTRANSFERASE Panther PTHR10108
SAM-dependent methyltransferases KOG KOG1269
sterol 24-C-methyltransferase EC 2.1.1.41
sterol 24-C-methyltransferase [EC:2.1.1.41] KO K00559
sterol methyltransferase 1 AT AT5G13710

Glyma15g43210

Copper amine oxidase, enzyme domain PFAM PF01179
COPPER/TOPAQUINONE OXIDASE Panther PTHR10638
Copper amine oxidase KOG KOG1186
primary-amine oxidase EC 1.4.3.21
E1.4.3.6, tynA; copper amine oxidase [EC:1.4.3.6 ] [COG:COG3733 ] [GO:0008131 ] KO K00276
Activity=amine oxidase (copper-containing); Pathway=phenylethanol biosynthesis SoyCyc PWY-5751
Activity=amine oxidase copper-containing; Pathway=beta-alanine biosynthesis I SoyCyc PWY-3981
primary amine oxidase activity PFAM PF02727
primary amine oxidase activity PFAM PF02728
primary amine oxidase activity PFAM PF01179
primary amine oxidase activity Panther PTHR10638
Copper amine oxidase KOG KOG1186
Copper amine oxidase family protein AT AT4G12290

Glyma15g43220

Flavin containing amine oxidoreductase PFAM PF01593
AMINE OXIDASE Panther PTHR10742
Amine oxidase KOG KOG0029
Polyamine oxidase. EC 1.5.3.11
KO K00308
Activity=polyamine oxidase; Pathway=beta-alanine biosynthesis I SoyCyc PWY-3981
Thi4 family PFAM PF01946
Flavin containing amine oxidoreductase PFAM PF01593
AMINE OXIDASE Panther PTHR10742
Amine oxidase KOG KOG0029
polyamine oxidase (propane-1,3-diamine-forming) EC 1.5.3.14
polyamine oxidase (propane-1,3-diamine-forming) [EC:1.5.3.14] KO K13366
polyamine oxidase 1 AT AT5G13700

Glyma15g43243

Wound-induced protein PFAM PF12609
Wound-responsive family protein AT AT4G10265

Glyma15g43266

Uncharacterized protein family, UPF0114 PFAM PF03350
Uncharacterised protein family (UPF0114) AT AT5G13720

Glyma15g43289

thiamine pyrophosphate binding PFAM PF02776
catalytic activity PFAM PF02775
Mandelate racemase / muconate lactonizing enzyme, C-terminal domain PFAM PF01188
Ndr family PFAM PF03096
alpha/beta hydrolase fold PFAM PF00561
hydrolase activity PFAM PF07859
catalytic activity Panther PTHR13794
Isochorismate synthase KOG KOG1223
magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases AT AT1G68890

Glyma15g43312

PROTEIN ARGININE N-METHYLTRANSFERASE Panther PTHR11006
protein arginine methyltransferase 6 AT AT3G20020

Glyma15g43336

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT4G02750

Glyma15g43360

NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE RELATED Panther PTHR19446:SF34
thiamine pyrophosphate binding PFAM PF02776
NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE RELATED Panther PTHR19446:SF34
magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases AT AT1G68890

Glyma15g43410

SET domain-containing protein AT AT1G01920

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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