Genes Covered By A Chromosome Alteration FN0170142.M2.7

Gene Name

Gene Annotation

Glyma07g09640

Aldehyde dehydrogenase family PFAM PF00171
ALDEHYDE DEHYDROGENASE-RELATED Panther PTHR11699
Aldehyde dehydrogenase KOG KOG2450
Activity=bixin_aldehyde_dehydrogenase; Pathway=β-alanine biosynthesis I SoyCyc PWY-3981
Activity=bixin_aldehyde_dehydrogenase; Pathway=ferulate and sinapate biosynthesis SoyCyc PWY-5168
Activity=bixin_aldehyde_dehydrogenase; Pathway=bixin biosynthesis SoyCyc PWY-5305
Activity=bixin_aldehyde_dehydrogenase; Pathway=ethanol degradation IV SoyCyc PWY66-162
Activity=bixin_aldehyde_dehydrogenase; Pathway=ethanol degradation II SoyCyc PWY66-21
Activity=bixin_aldehyde_dehydrogenase; Pathway=bixin biosynthesis SoyCyc PWY-5305
Activity=bixin_aldehyde_dehydrogenase; Pathway=ferulate and sinapate biosynthesis SoyCyc PWY-5168
oxidoreductase activity PFAM PF00171
ALDEHYDE DEHYDROGENASE-RELATED Panther PTHR11699
Aldehyde dehydrogenase KOG KOG2450
coniferyl-aldehyde dehydrogenase EC 1.2.1.68
coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] KO K12355
aldehyde dehydrogenase 2C4 AT AT3G24503

Glyma07g09650

ALDEHYDE DEHYDROGENASE-RELATED Panther PTHR11699
oxidoreductase activity PFAM PF00171
ALDEHYDE DEHYDROGENASE-RELATED Panther PTHR11699
aldehyde dehydrogenase 2C4 AT AT3G24503

Glyma07g09660

MutS domain V PFAM PF00488
DNA MISMATCH REPAIR MUTS RELATED PROTEINS Panther PTHR11361
mismatched DNA binding PFAM PF01624
mismatched DNA binding PFAM PF05188
mismatched DNA binding PFAM PF05192
mismatched DNA binding PFAM PF00488
DNA MISMATCH REPAIR MUTS RELATED PROTEINS Panther PTHR11361
MUTS homolog 7 AT AT3G24495

Glyma07g09670

GUANYL-NUCLEOTIDE EXCHANGE FACTOR Panther PTHR10663
Pattern-formation protein/guanine nucleotide exchange factor KOG KOG0928
ARF guanyl-nucleotide exchange factor activity PFAM PF01369
GUANYL-NUCLEOTIDE EXCHANGE FACTOR Panther PTHR10663
Pattern-formation protein/guanine nucleotide exchange factor KOG KOG0928
GNOM-like 2 AT AT5G19610

Glyma07g09690

Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain KOG KOG4282
Alcohol dehydrogenase transcription factor Myb/SANT-like PFAM PF10545
Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain KOG KOG4282
Alcohol dehydrogenase transcription factor Myb/SANT-like family protein AT AT3G24490

Glyma07g09700

Glycine rich protein family PFAM PF07172

Glyma07g09705

intracellular PFAM PF00338
intracellular Panther PTHR11700
Ribosomal protein S10p/S20e family protein AT AT3G45030

Glyma07g09710

STAS domain PFAM PF01740
SULFATE TRANSPORTER Panther PTHR11814
Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) KOG KOG0236
transport PFAM PF00916
STAS domain PFAM PF01740
SULFATE TRANSPORTER Panther PTHR11814
Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) KOG KOG0236
sulfate transporter 3;5 AT AT5G19600

Glyma07g09730

Leucine Rich Repeat PFAM PF00560
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Leucine-rich repeat (LRR) family protein AT AT3G24480

Glyma07g09740

Serine incorporator (Serinc) PFAM PF03348
TUMOR DIFFERENTIALLY EXPRESSED PROTEIN-RELATED Panther PTHR10383
Tumor differentially expressed (TDE) protein KOG KOG2592
membrane PFAM PF03348
membrane Panther PTHR10383
Tumor differentially expressed (TDE) protein KOG KOG2592
Serinc-domain containing serine and sphingolipid biosynthesis protein AT AT3G24460

Glyma07g09751

ARF GTPase activator activity PFAM PF01412
CENTAURIN/ARF Panther PTHR23180
Predicted GTPase-activating protein KOG KOG0702
NSP (nuclear shuttle protein)-interacting GTPase AT AT4G13350

Glyma07g09760

Heavy-metal-associated domain PFAM PF00403
COPPER TRANSPORT PROTEIN ATOX1-RELATED Panther PTHR22814
Copper chaperone KOG KOG1603
metal ion transport PFAM PF00403
COPPER TRANSPORT PROTEIN ATOX1-RELATED Panther PTHR22814
Copper chaperone KOG KOG1603
Heavy metal transport/detoxification superfamily protein AT AT3G24450

Glyma07g09770

REGULATOR OF CHROMOSOME CONDENSATION-RELATED Panther PTHR22870:SF25
REGULATOR OF CHROMOSOME CONDENSATION-RELATED Panther PTHR22870:SF25
AT AT1G72490

Glyma07g09780

AT AT3G18510

Glyma07g09790

Protein of unknown function, DUF538 PFAM PF04398
Protein of unknown function, DUF538 PFAM PF04398
Protein of unknown function, DUF538 AT AT5G19590

Glyma07g09800

Fibronectin type III domain PFAM PF00041
FAMILY NOT NAMED Panther PTHR21736
Protein of unknown function (DUF1423) PFAM PF07227
protein binding PFAM PF00041
VERNALIZATION-INSENSITIVE PROTEIN 3 Panther PTHR21736
Fibronectin type III domain-containing protein AT AT3G24440

Glyma07g09810

Plant phosphoribosyltransferase C-terminal PFAM PF08372
protein binding PFAM PF00168
Plant phosphoribosyltransferase C-terminal PFAM PF08372
SYNAPTOTAGMIN Panther PTHR10024
Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein AT AT3G57880

Glyma07g09820

ParA/MinD ATPase like PFAM PF10609
NUCLEOTIDE-BINDING PROTEIN NBP35(YEAST)-RELATED Panther PTHR23264
Predicted ATPase, nucleotide-binding KOG KOG3022
chloroplast GO GO:0009507
ATP binding GO GO:0005524
oxidation-reduction process GO GO:0055114
Domain of unknown function DUF59 PFAM PF01883
VirC1 protein PFAM PF07015
PFAM PF09140
CobQ/CobB/MinD/ParA nucleotide binding domain PFAM PF01656
ParA/MinD ATPase like PFAM PF10609
oxidation-reduction process PFAM PF06155
NUCLEOTIDE-BINDING PROTEIN NBP35(YEAST)-RELATED Panther PTHR23264
Predicted ATPase, nucleotide-binding KOG KOG3022
ATP binding AT AT3G24430

Glyma07g09840

alpha/beta hydrolase fold PFAM PF00561
ALPHA/BETA HYDROLASE RELATED Panther PTHR10992
Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) KOG KOG1454
alpha/beta hydrolase fold PFAM PF00561
ALPHA/BETA HYDROLASE RELATED Panther PTHR10992
Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) KOG KOG1454
alpha/beta-Hydrolases superfamily protein AT AT3G24420

Glyma07g09850

THIAMIN PYROPHOSPHOKINASE Panther PTHR13622
Thiamine pyrophosphokinase KOG KOG4313
THIAMIN PYROPHOSPHOKINASE Panther PTHR13622
nudix hydrolase homolog 20 AT AT5G19460

Glyma07g09860

ab-hydrolase associated lipase region PFAM PF04083
LYSOSOMAL ACID LIPASE-RELATED Panther PTHR11005
Triglyceride lipase-cholesterol esterase KOG KOG2624
lipid metabolic process PFAM PF04083
LYSOSOMAL ACID LIPASE-RELATED Panther PTHR11005
Triglyceride lipase-cholesterol esterase KOG KOG2624
alpha/beta-Hydrolases superfamily protein AT AT1G73920

Glyma07g09880

ATP-dependent Clp protease adaptor protein ClpS PFAM PF02617
ATP-dependent Clp protease adaptor protein ClpS KO K06891
protein catabolic process PFAM PF02617
ATP-dependent Clp protease adaptor protein ClpS KO K06891
Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein AT AT1G68660

Glyma07g09890

CASP C terminal PFAM PF08172
CUT-LIKE 1 (CTL1) Panther PTHR14043
Transcription factor/CCAAT displacement protein CDP1 KOG KOG0963
homeobox protein cut-like KO K09313
integral to membrane GO GO:0016021
Golgi apparatus GO GO:0005794
intra-Golgi vesicle-mediated transport GO GO:0006891
intra-Golgi vesicle-mediated transport PFAM PF08172
CUT-LIKE 1 (CTL1) Panther PTHR14043
Transcription factor/CCAAT displacement protein CDP1 KOG KOG0963
homeobox protein cut-like KO K09313
CCAAT-displacement protein alternatively spliced product AT AT3G18480

Glyma07g09900

Cytochrome P450 PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156
Activity=monooxygenase; Pathway=dhurrin biosynthesis SoyCyc PWY-861
Activity=monooxygenase; Pathway=suberin biosynthesis SoyCyc PWY-1121
Activity=monooxygenase; Pathway=brassinosteroid biosynthesis II SoyCyc PWY-2582
Activity=monooxygenase; Pathway=phenylpropanoid biosynthesis SoyCyc PWY-361
Activity=monooxygenase; Pathway=rosmarinic acid biosynthesis I SoyCyc PWY-5048
Activity=monooxygenase; Pathway=brassinosteroid biosynthesis I SoyCyc PWY-699
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156
cytochrome P450, family 71, subfamily B, polypeptide 37 AT AT3G26330

Glyma07g09960

Cytochrome P450 PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156
Activity=monooxygenase; Pathway=luteolin biosynthesis SoyCyc PWY-5060
Activity=monooxygenase; Pathway=flavonol biosynthesis SoyCyc PWY-3101
Activity=monooxygenase; Pathway=leucodelphinidin biosynthesis SoyCyc PWY-5152
Activity=monooxygenase; Pathway=leucopelargonidin and leucocyanidin biosynthesis SoyCyc PWY1F-823
Activity=monooxygenase; Pathway=suberin biosynthesis SoyCyc PWY-1121
Activity=monooxygenase; Pathway=brassinosteroid biosynthesis II SoyCyc PWY-2582
Activity=monooxygenase; Pathway=phenylpropanoid biosynthesis SoyCyc PWY-361
Activity=monooxygenase; Pathway=rosmarinic acid biosynthesis I SoyCyc PWY-5048
Activity=monooxygenase; Pathway=brassinosteroid biosynthesis I SoyCyc PWY-699
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156
cytochrome P450, family 71, subfamily B, polypeptide 10 AT AT5G57260

Glyma07g09970

Cytochrome P450 PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156
Activity=monooxygenase; Pathway=luteolin biosynthesis SoyCyc PWY-5060
Activity=monooxygenase; Pathway=flavonol biosynthesis SoyCyc PWY-3101
Activity=monooxygenase; Pathway=leucodelphinidin biosynthesis SoyCyc PWY-5152
Activity=monooxygenase; Pathway=leucopelargonidin and leucocyanidin biosynthesis SoyCyc PWY1F-823
Activity=monooxygenase; Pathway=suberin biosynthesis SoyCyc PWY-1121
Activity=monooxygenase; Pathway=brassinosteroid biosynthesis II SoyCyc PWY-2582
Activity=monooxygenase; Pathway=phenylpropanoid biosynthesis SoyCyc PWY-361
Activity=monooxygenase; Pathway=rosmarinic acid biosynthesis I SoyCyc PWY-5048
Activity=monooxygenase; Pathway=brassinosteroid biosynthesis I SoyCyc PWY-699
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156
cytochrome P450, family 71, subfamily A, polypeptide 22 AT AT3G48310

Glyma07g09980

ASPARTYL PROTEASES Panther PTHR13683
Aspartyl protease KOG KOG1339
aspartic-type endopeptidase activity PFAM PF00026
aspartic-type endopeptidase activity Panther PTHR13683
Aspartyl protease KOG KOG1339
Eukaryotic aspartyl protease family protein AT AT1G49050

Glyma07g09990

Flavin containing amine oxidoreductase PFAM PF01593
AMINE OXIDASE Panther PTHR10742
Amine oxidase KOG KOG0029
protein binding PFAM PF04433
Thi4 family PFAM PF01946
oxidoreductase activity PFAM PF00890
Flavin containing amine oxidoreductase PFAM PF01593
AMINE OXIDASE Panther PTHR10742
Amine oxidase KOG KOG0029
LSD1-like 1 AT AT1G62830

Glyma07g10000

HEAT repeat PFAM PF02985
SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT A Panther PTHR10648
Protein phosphatase 2A regulatory subunit A and related proteins KOG KOG0211
regulation of stomatal movement GO GO:0010119
positive regulation of abscisic acid mediated signaling pathway GO GO:0009789
abscisic acid mediated signaling pathway GO GO:0009738
auxin polar transport GO GO:0009926
protein phosphatase type 2A complex GO GO:0000159
response to ethylene stimulus GO GO:0009723
binding GO GO:0005488
cell wall GO GO:0005618
regulation of phosphorylation GO GO:0042325
protein phosphatase type 2A regulator activity GO GO:0008601
plasma membrane GO GO:0005886
response to cadmium ion GO GO:0046686
protein binding PFAM PF02985
SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT A Panther PTHR10648
Protein phosphatase 2A regulatory subunit A and related proteins KOG KOG0211
protein phosphatase 2 (formerly 2A), regulatory subunit A KO K03456
protein phosphatase 2A subunit A2 AT AT3G25800

Glyma07g10010

Uncharacterised protein family UPF0005 PFAM PF01027
Predicted membrane protein KOG KOG4711
response to aluminum ion PFAM PF11744
transport PFAM PF04632
Predicted membrane protein KOG KOG4711
aluminum-activated malate transporter 9 AT AT3G18440

Glyma07g10030

Glyma07g10040

COPPER TRANSPORT PROTEIN ATOX1-RELATED Panther PTHR22814
Copper chaperone KOG KOG1603
COPPER TRANSPORT PROTEIN ATOX1-RELATED Panther PTHR22814
Copper chaperone KOG KOG1603
Copper transport protein family AT AT3G25855

Glyma07g10051

Protease inhibitor/seed storage/LTP family PFAM PF00234
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein AT AT1G73890

Glyma07g10060

AT AT1G73885

Glyma07g10070

AT AT1G13360

Glyma07g10080

Glyma07g10090

Initiation factor 2 subunit family PFAM PF01008
TRANSLATION INITIATION FACTOR EIF-2B Panther PTHR10233
Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) KOG KOG1465
eIF-2BB, EIF2B2; translation initiation factor eIF-2B beta subunit [COG:COG1184 ] [GO:0003743 ] KO K03754
cellular metabolic process GO GO:0044237
translational initiation GO GO:0006413
eukaryotic translation initiation factor 2B complex GO GO:0005851
GTP binding GO GO:0005525
translation initiation factor activity GO GO:0003743
cellular metabolic process PFAM PF01008
cellular metabolic process Panther PTHR10233
Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) KOG KOG1465
translation initiation factor eIF-2B beta subunit KO K03754
NagB/RpiA/CoA transferase-like superfamily protein AT AT3G07300

Glyma07g10100

SNARE-complex protein Syntaxin-18 N-terminus PFAM PF10496
FAMILY NOT NAMED Panther PTHR15959
SNARE protein Syntaxin 18/UFE1 KOG KOG3894
syntaxin 18 KO K08492
SNARE-complex protein Syntaxin-18 N-terminus PFAM PF10496
SYNTAXIN-18 Panther PTHR15959
SNARE protein Syntaxin 18/UFE1 KOG KOG3894
syntaxin 18 KO K08492
syntaxin of plants 81 AT AT1G51740

Glyma07g10116

sequence-specific DNA binding transcription factor activity PFAM PF00847
Integrase-type DNA-binding superfamily protein AT AT1G68550

Glyma07g10133

CARBON CATABOLITE REPRESSOR PROTEIN 4 Panther PTHR12121
DNAse I-like superfamily protein AT AT1G73875

Glyma07g10150

Glyma07g10161

intracellular PFAM PF00643
protein binding PFAM PF06203
GATA-4/5/6 transcription factors KOG KOG1601
B-box type zinc finger protein with CCT domain AT AT1G25440

Glyma07g10170

NADH-ubiquinone oxidoreductase, subunit NDUFB10/PDSW KOG KOG4009
NADH dehydrogenase (ubiquinone). EC 1.6.5.3
NADH dehydrogenase. EC 1.6.99.3
NDUFB10; NADH dehydrogenase (ubiquinone) 1 beta subcomplex 10 [EC:1.6.5.3 1.6.99.3 ] [GO:0008137 0003954 ] KO K03966
NADH-ubiquinone oxidoreductase subunit 10 PFAM PF10249
NADH-ubiquinone oxidoreductase, subunit NDUFB10/PDSW KOG KOG4009
NADH:ubiquinone reductase (H+-translocating) EC 1.6.5.3
NADH dehydrogenase EC 1.6.99.3
NADH dehydrogenase (ubiquinone) 1 beta subcomplex 10 [EC:1.6.5.3 1.6.99.3] KO K03966
Complex I subunit NDUFS6 AT AT3G18410

Glyma07g10180

Protein of unknown function DUF260 PFAM PF03195
Protein of unknown function DUF260 PFAM PF03195
LOB domain-containing protein 41 AT AT3G02550

Glyma07g10210

Glyma07g10220

AT AT5G16110

Glyma07g10231

Protein of unknown function (DUF1666) PFAM PF07891
intracellular Panther PTHR10759
Protein of unknown function (DUF1666) AT AT1G73850

Glyma07g10240

No apical meristem (NAM) protein PFAM PF02365
regulation of transcription, DNA-dependent PFAM PF02365
NAC domain containing protein 58 AT AT3G18400

Glyma07g10250

PHOSPHOLIPASE-RELATED Panther PTHR11614
Lysophospholipase KOG KOG1455
PHOSPHOLIPASE-RELATED Panther PTHR11614
alpha/beta-Hydrolases superfamily protein AT AT5G16120

Glyma07g10260

Glyma07g10270

CRS1 / YhbY (CRM) domain PFAM PF01985
Poly(A)-specific exoribonuclease PARN KOG KOG1990
RNA binding PFAM PF01985
Poly(A)-specific exoribonuclease PARN KOG KOG1990
CRS1 / YhbY (CRM) domain-containing protein AT AT3G18390

Glyma07g10280

C2 domain PFAM PF00168
SYNAPTOTAGMIN Panther PTHR10024
Predicted Ca2+-dependent phospholipid-binding protein KOG KOG1030
protein binding PFAM PF00168
SYNAPTOTAGMIN Panther PTHR10024
Predicted Ca2+-dependent phospholipid-binding protein KOG KOG1030
C2 domain-containing protein AT AT3G18370

Glyma07g10290

VQ motif PFAM PF05678
VQ motif PFAM PF05678
VQ motif-containing protein AT AT3G18360

Glyma07g10300

Plant protein of unknown function (DUF639) PFAM PF04842
Plant protein of unknown function (DUF639) PFAM PF04842
Plant protein of unknown function (DUF639) AT AT1G48840

Glyma07g10311

transcription regulator activity PFAM PF00010
BR enhanced expression 1 AT AT1G18400

Glyma07g10321

Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Transcription factor, Myb superfamily KOG KOG0048
myb domain protein 62 AT AT1G68320

Glyma07g10330

Ribosomal protein S7e PFAM PF01251
40S RIBOSOMAL PROTEIN S7 Panther PTHR11278
40S ribosomal protein S7 KOG KOG3320
RP-S7e, RPS7; small subunit ribosomal protein S7e [GO:0005843 ] KO K02993
intracellular PFAM PF01251
intracellular Panther PTHR11278
40S ribosomal protein S7 KOG KOG3320
small subunit ribosomal protein S7e KO K02993
Ribosomal protein S7e family protein AT AT3G02560
Ribosomal protein S7e family protein AT AT1G48830

Glyma07g10340

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
S-locus lectin protein kinase family protein AT AT4G21390

Glyma07g10350

Mov34/MPN/PAD-1 family PFAM PF01398
AMSH Panther PTHR12947
SMAD6 interacting protein AMSH, contains JAB/MPN/Mov34 domain KOG KOG2880
protein binding PFAM PF01398
AMSH Panther PTHR12947
SMAD6 interacting protein AMSH, contains JAB/MPN/Mov34 domain KOG KOG2880
associated molecule with the SH3 domain of STAM 1 AT AT1G48790

Glyma07g10370

AT AT1G48780

Glyma07g10381

ATP-BINDING CASSETTE TRANSPORTER Panther PTHR19241
pleiotropic drug resistance 11 AT AT1G66950

Glyma07g10390

Protein of unknown function (DUF1639) PFAM PF07797
Protein of unknown function (DUF1639) PFAM PF07797
Protein of unknown function (DUF1639) AT AT1G68340

Glyma07g10400

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
RING FINGER AND CHY ZINC FINGER DOMAIN CONTAINING 1 Panther PTHR21319
Zn-finger protein KOG KOG1940
Hemerythrin HHE cation binding domain PFAM PF01814
zinc ion binding PFAM PF05495
RING FINGER AND CHY ZINC FINGER DOMAIN CONTAINING 1 Panther PTHR21319
Zn-finger protein KOG KOG1940
zinc finger protein-related AT AT3G18290

Glyma07g10430

Domain of unknown function, DUF266 PFAM PF03267
membrane PFAM PF02485
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein AT AT1G68390

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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