Genes Covered By A Chromosome Alteration FN0142091.M2.1

Gene Name

Gene Annotation

Glyma18g25560

RNB domain PFAM PF00773
RIBONUCLEASE Panther PTHR23355
Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 KOG KOG2102
Exoribonuclease II. EC 3.1.13.1
E3.1.13.1, rnb; exoribonuclease II [EC:3.1.13.1 ] [COG:COG0557 ] [GO:0008859 ] KO K01147
ribonuclease activity PFAM PF00773
RIBONUCLEASE Panther PTHR23355
Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 KOG KOG2102
Ribonuclease II/R family protein AT AT5G02250

Glyma18g25760

Rhomboid family PFAM PF01694
RHOMBOID-RELATED Panther PTHR22936
Rhomboid family proteins KOG KOG2289
serine-type endopeptidase activity PFAM PF01694
serine-type endopeptidase activity Panther PTHR22936
Rhomboid family proteins KOG KOG2289
RHOMBOID-like 1 AT AT2G29050

Glyma18g25785

BSD domain PFAM PF03909
BSD domain-containing protein AT AT3G24820

Glyma18g25810

peroxidase activity PFAM PF00141
ascorbate peroxidase 2 AT AT3G09640

Glyma18g25820

Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFAM PF00903
Lactoylglutathione lyase / glyoxalase I family protein AT AT5G48480

Glyma18g25845

stomagen AT AT4G12970

Glyma18g25870

Ubiquitin family PFAM PF00240
UBIQUITIN Panther PTHR10666
Ubiquitin/60s ribosomal protein L40 fusion KOG KOG0003
Ubiquitin-2 like Rad60 SUMO-like PFAM PF11976
protein binding PFAM PF00240
UBIQUITIN Panther PTHR10666
Ubiquitin/60s ribosomal protein L40 fusion KOG KOG0003
Ubiquitin supergroup;Ribosomal protein L40e AT AT2G36170

Glyma18g25910

Domain of unknown function DUF26 PFAM PF01657
SERINE/THREONINE RECEPTOR-LIKE PROTEIN KINASE Panther PTHR23258:SF316
Domain of unknown function DUF26 PFAM PF01657
SERINE/THREONINE RECEPTOR-LIKE PROTEIN KINASE Panther PTHR23258:SF323
receptor-like protein kinase-related family protein AT AT5G48540

Glyma18g26015

Glyma18g26120

Protease inhibitor/seed storage/LTP family PFAM PF00234
Protease inhibitor/seed storage/LTP family PFAM PF00234
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein AT AT5G48490

Glyma18g26140

AT AT5G48500

Glyma18g26151

protein binding PFAM PF00307
FIMBRIN/PLASTIN Panther PTHR19961
Actin binding Calponin homology (CH) domain-containing protein AT AT5G48460

Glyma18g26161

PIF1 helicase PFAM PF05970
HELICASE-RELATED Panther PTHR10492
DNA helicase PIF1/RRM3 KOG KOG0987
PIF1 helicase AT AT3G51700

Glyma18g26171

protein dimerization activity PFAM PF05699
BED zinc finger ;hAT family dimerisation domain AT AT3G42170

Glyma18g26180

Protein of unknown function, DUF538 PFAM PF04398
Protein of unknown function, DUF538 PFAM PF04398
Protein of unknown function, DUF538 AT AT3G07460

Glyma18g26190

Ribosomal protein S6e PFAM PF01092
40S RIBOSOMAL PROTEIN S6 Panther PTHR11502
40S ribosomal protein S6 KOG KOG1646
growth GO GO:0040007
embryo development ending in seed dormancy GO GO:0009793
cytosolic ribosome GO GO:0022626
plasma membrane GO GO:0005886
membrane GO GO:0016020
chloroplast GO GO:0009507
nucleolus GO GO:0005730
translation GO GO:0006412
cytosolic small ribosomal subunit GO GO:0022627
structural constituent of ribosome GO GO:0003735
intracellular PFAM PF01092
intracellular Panther PTHR11502
40S ribosomal protein S6 KOG KOG1646
Ribosomal protein S6e AT AT5G10360

Glyma18g26390

PRENYLATED RAB ACCEPTOR 1-RELATED Panther PTHR19317
PRENYLATED RAB ACCEPTOR 1-RELATED Panther PTHR19317
embryo defective 2752 AT AT4G29660

Glyma18g26590

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT3G47840

Glyma18g26600

Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Transcription factor, Myb superfamily KOG KOG0048
Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Transcription factor, Myb superfamily KOG KOG0048
myb-like HTH transcriptional regulator family protein AT AT2G37630

Glyma18g26620

Arabidopsis proteins of unknown function PFAM PF03005
Arabidopsis proteins of unknown function PFAM PF03005
TRICHOME BIREFRINGENCE-LIKE 43 AT AT2G30900

Glyma18g26630

Arabidopsis proteins of unknown function PFAM PF03005
Arabidopsis proteins of unknown function PFAM PF03005
TRICHOME BIREFRINGENCE-LIKE 43 AT AT2G30900

Glyma18g26710

Glyma18g26790

Cell cycle regulated microtubule associated protein PFAM PF12214
gb def: F11M21.29 protein Panther PTHR14326:SF5
targeting protein for XKLP2 AT AT1G03780

Glyma18g26870

Dof domain, zinc finger PFAM PF02701
zinc ion binding PFAM PF02701
Dof-type zinc finger DNA-binding family protein AT AT5G02460

Glyma18g27090

Rhamnogalacturonate lyase family PFAM PF06045
Rhamnogalacturonate lyase family PFAM PF06045
Rhamnogalacturonate lyase family protein AT AT2G22620

Glyma18g27290

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
binding PFAM PF00139
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Concanavalin A-like lectin protein kinase family protein AT AT5G10530

Glyma18g27491

binding PFAM PF00139
MASS1-RELATED Panther PTHR19328:SF6
Concanavalin A-like lectin protein kinase family protein AT AT5G10530

Glyma18g27690

Legume lectin domain PFAM PF00139
binding PFAM PF00139
Concanavalin A-like lectin protein kinase family protein AT AT5G10530

Glyma18g27710

Serine hydroxymethyltransferase PFAM PF00464
SERINE HYDROXYMETHYLTRANSFERASE Panther PTHR11680
Glycine/serine hydroxymethyltransferase KOG KOG2467
Glycine hydroxymethyltransferase. EC 2.1.2.1
E2.1.2.1, glyA; glycine hydroxymethyltransferase [EC:2.1.2.1 ] [COG:COG0112 ] [GO:0004372 ] KO K00600
mitochondrial respiratory chain complex I GO GO:0005747
apoplast GO GO:0048046
zinc ion binding GO GO:0008270
cobalt ion binding GO GO:0050897
poly(U) RNA binding GO GO:0008266
photorespiration GO GO:0009853
membrane GO GO:0016020
stromule GO GO:0010319
plasma membrane GO GO:0005886
cytosolic ribosome GO GO:0022626
response to cadmium ion GO GO:0046686
response to cold GO GO:0009409
mitochondrion GO GO:0005739
chloroplast GO GO:0009507
plant-type hypersensitive response GO GO:0009626
mitochondrial matrix GO GO:0005759
nucleus GO GO:0005634
L-serine metabolic process GO GO:0006563
glycine decarboxylation via glycine cleavage system GO GO:0019464
glycine hydroxymethyltransferase activity GO GO:0004372
glycine metabolic process GO GO:0006544
protein binding GO GO:0005515
Activity=L-allo-threonine aldolase; Pathway=glycine biosynthesis SoyCyc GLYSYN2-PWY
Activity=L-allo-threonine aldolase; Pathway=folate polyglutamylation SoyCyc PWY-2161
Activity=L-allo-threonine aldolase; Pathway=folate transformations II SoyCyc PWY-3841
Activity=L-allo-threonine aldolase; Pathway=photorespiration SoyCyc PWY-181
Activity=L-allo-threonine aldolase; Pathway=Glycine biosynthesis I SoyCyc GLYSYN-PWY
Activity=L-allo-threonine aldolase; Pathway=purine degradation II anaerobic SoyCyc PWY-5497
Activity=L-allo-threonine aldolase; Pathway=folate polyglutamylation I SoyCyc PWY-2161
Activity=L-allo-threonine aldolase; Pathway=folate transformations SoyCyc PWY-2201
Activity=L-allo-threonine aldolase; Pathway=formylTHF biosynthesis II SoyCyc PWY-3841
Activity=L-allo-threonine aldolase; Pathway=superpathway of serine and glycine biosynthesis I SoyCyc SER-GLYSYN-PWY
Activity=L-allo-threonine aldolase; Pathway=photorespiration SoyCyc PWY-181
glycine hydroxymethyltransferase activity PFAM PF00464
glycine hydroxymethyltransferase activity Panther PTHR11680
Glycine/serine hydroxymethyltransferase KOG KOG2467
glycine hydroxymethyltransferase EC 2.1.2.1
glycine hydroxymethyltransferase [EC:2.1.2.1] KO K00600
serine transhydroxymethyltransferase 1 AT AT4G37930

Glyma18g27930

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Panther PTHR12183
Predicted E3 ubiquitin ligase KOG KOG1571
acid-amino acid ligase activity PFAM PF12483
UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Panther PTHR12183
Predicted E3 ubiquitin ligase KOG KOG1571
E3 Ubiquitin ligase family protein AT AT1G54150

Glyma18g28130

Glycosyltransferase family 28 N-terminal domain PFAM PF03033
UDP-glucuronosyl and UDP-glucosyl transferase KOG KOG1192
cellulose biosynthetic process GO GO:0030244
seed development GO GO:0048316
cold acclimation GO GO:0009631
sterol metabolic process GO GO:0016125
beta-sitosterol UDP-glucosyltransferase activity GO GO:0051507
membrane GO GO:0016020
sterol 3-beta-glucosyltransferase activity GO GO:0016906
plasma membrane GO GO:0005886
transferase activity, transferring glycosyl groups GO GO:0016757
lipid glycosylation PFAM PF03033
transferase activity, transferring hexosyl groups PFAM PF00201
UDP-glucuronosyl and UDP-glucosyl transferase KOG KOG1192
sterol 3β-glucosyltransferase EC 2.4.1.173
sterol 3beta-glucosyltransferase [EC:2.4.1.173] KO K05841
UDP-Glycosyltransferase superfamily protein AT AT3G07020

Glyma18g28140

Core-2/I-Branching enzyme PFAM PF02485
GLYCOSYLTRANSFERASE 14 FAMILY MEMBER Panther PTHR19297
Branching enzyme KOG KOG0799
membrane PFAM PF02485
GLYCOSYLTRANSFERASE 14 FAMILY MEMBER Panther PTHR19297
Branching enzyme KOG KOG0799
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein AT AT5G15050

Glyma18g28250

AT AT4G13200

Glyma18g28360

Glyma18g28427

AT AT1G34070

Glyma18g28494

Arabidopsis proteins of unknown function PFAM PF03005
TRICHOME BIREFRINGENCE-LIKE 43 AT AT2G30900

Glyma18g28562

Transducin/WD40 repeat-like superfamily protein AT AT5G24710

Glyma18g28630

Arabidopsis proteins of unknown function PFAM PF03005
Arabidopsis proteins of unknown function PFAM PF03005
TRICHOME BIREFRINGENCE-LIKE 43 AT AT2G30900

Glyma18g28830

Transketolase, C-terminal domain PFAM PF02780
DEHYDROGENASE RELATED Panther PTHR11624
Transketolase KOG KOG0523
Activity=1-deoxy-D-xylulose-5-phosphate synthase; Pathway=methylerythritol phosphate pathway SoyCyc NONMEVIPP-PWY
Activity=1-deoxy-D-xylulose-5-phosphate synthase; Pathway=superpathway of geranylgeranyldiphosphate biosynthesis II (via MEP) SoyCyc PWY-5121
Activity=1-deoxy-D-xylulose-5-phosphate synthase; Pathway=pyridoxal 5'-phosphate biosynthesis SoyCyc PYRIDOXSYN-PWY
Activity=1-deoxy-D-xylulose-5-phosphate synthase; Pathway=superpathway of pyridoxal 5'-phosphate biosynthesis and salvage SoyCyc PWY0-845
Activity=1-deoxy-D-xylulose-5-phosphate synthase; Pathway=superpathway of geranylgeranyldiphosphate biosynthesis II via MEP SoyCyc PWY-5121
Activity=1-deoxy-D-xylulose-5-phosphate synthase; Pathway=methylerythritol phosphate pathway SoyCyc NONMEVIPP-PWY
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor PFAM PF00676
Transketolase, pyrimidine binding domain PFAM PF02779
catalytic activity PFAM PF02780
DEHYDROGENASE RELATED Panther PTHR11624
Transketolase KOG KOG0523
Deoxyxylulose-5-phosphate synthase AT AT4G15560

Glyma18g29100

GLUCOSYL/GLUCURONOSYL TRANSFERASES Panther PTHR11926
UDP-glucuronosyl and UDP-glucosyl transferase KOG KOG1192
transferase activity, transferring hexosyl groups PFAM PF00201
transferase activity, transferring hexosyl groups Panther PTHR11926
UDP-glucuronosyl and UDP-glucosyl transferase KOG KOG1192
UDP-Glycosyltransferase superfamily protein AT AT2G22590

Glyma18g29131

gb def: similar to kiaa1604 protein [mus musculus] Panther PTHR18034:SF4
MIF4G domain-containing protein / MA3 domain-containing protein AT AT5G17930

Glyma18g29160

Dehydrogenase E1 component PFAM PF00676
PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT (BACTERIAL AND ORGANELLAR) Panther PTHR11516
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor PFAM PF00676
PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT (BACTERIAL AND ORGANELLAR) Panther PTHR11516
Thiamin diphosphate-binding fold (THDP-binding) superfamily protein AT AT5G09300

Glyma18g29380

GLUCOSYL/GLUCURONOSYL TRANSFERASES Panther PTHR11926
UDP-glucuronosyl and UDP-glucosyl transferase KOG KOG1192
transferase activity, transferring hexosyl groups PFAM PF00201
transferase activity, transferring hexosyl groups Panther PTHR11926
UDP-glucuronosyl and UDP-glucosyl transferase KOG KOG1192
UDP-Glycosyltransferase superfamily protein AT AT2G22590

Glyma18g29390

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
ROP binding protein kinases 1 AT AT5G10520

Glyma18g29400

AP2 domain PFAM PF00847
sequence-specific DNA binding transcription factor activity PFAM PF00847
Integrase-type DNA-binding superfamily protein AT AT1G51190
Integrase-type DNA-binding superfamily protein AT AT3G20840

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain