SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

← Mutant Description Page

Genes Covered By A Chromosome Alteration FN0141766.02.02.M4.2

Gene NameGene Annotation
Glyma12g29590
  • GcpE proteinPFAMPF04551
  • transferred now EC 1.17.7.1EC1.17.4.3
  • E1.17.4.3, gcpE, ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [EC:1.17.4.3 ] [COG:COG0821 ] [GO:0046429 ]KOK03526
  • chloroplast stromaGOGO:0009570
  • systemic acquired resistance, salicylic acid mediated signaling pathwayGOGO:0009862
  • response to bacteriumGOGO:0009617
  • isopentenyl diphosphate biosynthetic process, mevalonate-independent pathwayGOGO:0019288
  • 4 iron, 4 sulfur cluster bindingGOGO:0051539
  • chloroplastGOGO:0009507
  • chloroplast envelopeGOGO:0009941
  • isoprenoid biosynthetic processGOGO:0008299
  • 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activityGOGO:0046429
  • Activity=4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase; Pathway=methylerythritol phosphate pathwaySoyCycNONMEVIPP-PWY
  • Activity=4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase; Pathway=superpathway of geranylgeranyldiphosphate biosynthesis II (via MEP)SoyCycPWY-5121
  • Activity=4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase; Pathway=superpathway of geranylgeranyldiphosphate biosynthesis II via MEPSoyCycPWY-5121
  • Activity=4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase; Pathway=methylerythritol phosphate pathwaySoyCycNONMEVIPP-PWY
  • terpenoid biosynthetic processPFAMPF04551
  • (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseEC1.17.7.1
  • (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]KOK03526
  • 4-hydroxy-3-methylbut-2-enyl diphosphate synthaseATAT5G60600
Glyma12g29600
  • Zinc finger, C3HC4 type (RING finger)PFAMPF00097
  • MEMBRANE ASSOCIATED RING FINGERPantherPTHR23012
  • Zinc finger, C3HC4 type (RING finger)PFAMPF00097
  • MEMBRANE ASSOCIATED RING FINGERPantherPTHR23012
  • Protein involved in mRNA turnover and stabilityKOGKOG1609
  • RING/U-box superfamily proteinATAT5G60580
Glyma12g29620
  • INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEINPantherPTHR11067
  • INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEINPantherPTHR11067
  • Inosine triphosphate pyrophosphatase family proteinATAT4G13720
Glyma12g29630
Glyma12g29640
  • Protein kinase domainPFAMPF00069
  • CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATEDPantherPTHR22982
  • Serine/threonine protein kinaseKOGKOG0583
  • Ca2+/calmodulin-dependent protein kinaseEC2.7.11.17
  • calcium/calmodulin-dependent protein kinase kinase [EC:2.7.11.17]KOK07359
  • MEKK and related serine/threonine protein kinasesKOGKOG0198
  • MAPKK-RELATED SERINE/THREONINE PROTEIN KINASESPantherPTHR22986
  • protein phosphorylationPFAMPF00069
  • Protein tyrosine kinasePFAMPF07714
  • CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATEDPantherPTHR22982
  • Serine/threonine protein kinaseKOGKOG0583
  • Ca2+/calmodulin-dependent protein kinaseEC2.7.11.17
  • calcium/calmodulin-dependent protein kinase kinase [EC:2.7.11.17]KOK07359
  • geminivirus rep interacting kinase 1ATAT3G45240
Glyma12g29650
Glyma12g29660
  • Galactose binding lectin domainPFAMPF02140
  • Glycosyl hydrolases family 35PFAMPF01301
  • BETA-GALACTOSIDASE RELATEDPantherPTHR23421
  • Beta-galactosidaseKOGKOG0496
  • Activity=beta-galactosidase; Pathway=lactose degradation IIISoyCycBGALACT-PWY
  • hydrolase activity, hydrolyzing O-glycosyl compoundsPFAMPF01301
  • PFAMPF02449
  • hydrolase activity, hydrolyzing O-glycosyl compoundsPFAMPF02837
  • sugar bindingPFAMPF02140
  • hydrolase activity, hydrolyzing O-glycosyl compoundsPantherPTHR23421
  • Beta-galactosidaseKOGKOG0496
  • beta-galactosidase 8ATAT2G28470






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo