Genes Covered By A Chromosome Alteration FN0141075.03.02.10.M5.1

Gene Name

Gene Annotation

Glyma01g41401

intracellular PFAM PF01245
intracellular Panther PTHR15680
Ribosomal protein L19 family protein AT AT4G17560

Glyma01g41411

AT AT4G17540

Glyma01g41420

AT AT4G17540

Glyma01g41430

MONOOXYGENASE Panther PTHR13789
Kynurenine 3-monooxygenase and related flavoprotein monooxygenases KOG KOG2614
monooxygenase activity PFAM PF01494
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF05834
oxidoreductase activity PFAM PF01266
oxidoreductase activity PFAM PF00890
squalene monooxygenase activity PFAM PF08491
MONOOXYGENASE Panther PTHR13789
Kynurenine 3-monooxygenase and related flavoprotein monooxygenases KOG KOG2614
FAD/NAD(P)-binding oxidoreductase family protein AT AT2G35660

Glyma01g41440

AT AT2G35658

Glyma01g41450

Lipase (class 3) PFAM PF01764
Predicted lipase KOG KOG4569
triglyceride lipase activity PFAM PF01764
Predicted lipase KOG KOG4569
alpha/beta-Hydrolases superfamily protein AT AT4G16820

Glyma01g41460

VEFS-Box of polycomb protein PFAM PF09733
FAMILY NOT NAMED Panther PTHR22597
Zn-finger protein joined to JAZF1 (predicted suppressor) KOG KOG2350
VEFS-Box of polycomb protein PFAM PF09733
POLYCOMB GROUP PROTEIN Panther PTHR22597
Zn-finger protein joined to JAZF1 (predicted suppressor) KOG KOG2350
VEFS-Box of polycomb protein AT AT4G16845

Glyma01g41471

gb def: Hypothetical protein dl4430c (Hypothetical protein AT4g16810) Panther PTHR22597:SF13
AT AT4G16807

Glyma01g41480

Ubiquitin carboxyl-terminal hydrolase, family 1 PFAM PF01088
PROTEASE FAMILY C12 UBIQUITIN CARBOXY-TERMINAL HYDROLASE Panther PTHR10589
Ubiquitin C-terminal hydrolase UCHL1 KOG KOG1415
Ubiquitinyl hydrolase 1. EC 3.4.19.12
KO K01309
ubiquitin thiolesterase activity PFAM PF01088
ubiquitin thiolesterase activity Panther PTHR10589
Ubiquitin C-terminal hydrolase UCHL1 KOG KOG1415
ubiquitinyl hydrolase 1 EC 3.4.19.12
ubiquitin carboxyl-terminal hydrolase L3 [EC:3.4.19.12] KO K05609
ubiquitin C-terminal hydrolase 3 AT AT4G17510

Glyma01g41491

sugar binding PFAM PF01453
protein phosphorylation PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
receptor-like protein kinase 1 AT AT5G60900

Glyma01g41500

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
sugar binding PFAM PF01453
Protein tyrosine kinase PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
receptor-like protein kinase 1 AT AT5G60900

Glyma01g41510

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
sugar binding PFAM PF01453
recognition of pollen PFAM PF00954
Protein tyrosine kinase PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
receptor-like protein kinase 1 AT AT5G60900

Glyma01g41520

AP2 domain PFAM PF00847
EREBP-like factor KO K09286
sequence-specific DNA binding transcription factor activity PFAM PF00847
EREBP-like factor KO K09286
ethylene responsive element binding factor 1 AT AT4G17500

Glyma01g41527

sequence-specific DNA binding transcription factor activity PFAM PF00847
ethylene responsive element binding factor 5 AT AT5G47230

Glyma01g41534

hydrolase activity PFAM PF00293
NUDIX HYDROLASE RELATED Panther PTHR13994
nudix hydrolase homolog 8 AT AT5G47240

Glyma01g41542

NUDIX HYDROLASE RELATED Panther PTHR13994
nudix hydrolase homolog 8 AT AT5G47240

Glyma01g41550

PPPDE putative peptidase domain PFAM PF05903
UNCHARACTERIZED Panther PTHR12378
Uncharacterized conserved protein KOG KOG0324
PPPDE putative peptidase domain PFAM PF05903
UNCHARACTERIZED Panther PTHR12378
Uncharacterized conserved protein KOG KOG0324
PPPDE putative thiol peptidase family protein AT AT5G47310

Glyma01g41560

RING/U-box superfamily protein AT AT5G53110

Glyma01g41571

palmitoyl-(protein) hydrolase activity PFAM PF02089
PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 Panther PTHR11247
Palmitoyl protein thioesterase KOG KOG2541
palmitoyl[protein] hydrolase EC 3.1.2.22
palmitoyl-protein thioesterase [EC:3.1.2.22] KO K01074
alpha/beta-Hydrolases superfamily protein AT AT3G60340

Glyma01g41581

nucleus PFAM PF04618
sequence-specific DNA binding PFAM PF00046
nucleus PFAM PF02183
HOMEOBOX PROTEIN Panther PTHR19418
Transcription factor HEX, contains HOX and HALZ domains KOG KOG0483
Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein AT AT5G47370

Glyma01g41590

ubiquitin-protein ligases AT AT2G39810

Glyma01g41600

Acyl-CoA oxidase PFAM PF01756
ELECTRON TRANSPORT OXIDOREDUCTASE Panther PTHR10909
Acyl-CoA oxidase KOG KOG0136
Acyl-CoA oxidase. EC 1.3.3.6
E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6 ] [GO:0003997 0016401 0016402 ] KO K00232
response to wounding GO GO:0009611
jasmonic acid biosynthetic process GO GO:0009695
response to fungus GO GO:0009620
pollen development GO GO:0009555
defense response to insect GO GO:0002213
peroxisome GO GO:0005777
response to cadmium ion GO GO:0046686
acyl-CoA oxidase activity GO GO:0003997
long-chain fatty acid metabolic process GO GO:0001676
fatty acid beta-oxidation GO GO:0006635
Activity=acyl-CoA oxidase; Pathway=jasmonic acid biosynthesis SoyCyc PWY-735
Activity=acyl-CoA oxidase; Pathway=fatty acid β-oxidation II (core pathway) SoyCyc PWY-5136
Activity=acyl-CoA oxidase; Pathway=superpathway of glyoxylate cycle and fatty acid degradation SoyCyc PWY-561
Activity=acyl-CoA oxidase; Pathway=fatty acid beta-oxidation II core pathway SoyCyc PWY-5136
acyl-CoA dehydrogenase activity PFAM PF02770
acyl-CoA oxidase activity PFAM PF01756
ELECTRON TRANSPORT OXIDOREDUCTASE Panther PTHR10909
Acyl-CoA oxidase KOG KOG0136
acyl-CoA oxidase EC 1.3.3.6
acyl-CoA oxidase [EC:1.3.3.6] KO K00232
acyl-CoA oxidase 1 AT AT4G16760

Glyma01g41610

Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
myb domain protein 5 AT AT3G13540

Glyma01g41620

Ribosomal L15 PFAM PF00827
RIBOSOMAL PROTEIN L15 Panther PTHR11847
60s ribosomal protein L15 KOG KOG1678
RP-L15e, RPL15; large subunit ribosomal protein L15e [GO:0005842 ] KO K02877
membrane GO GO:0016020
nucleolus GO GO:0005730
cytosolic large ribosomal subunit GO GO:0022625
vacuolar membrane GO GO:0005774
plasma membrane GO GO:0005886
translation GO GO:0006412
cytosolic ribosome GO GO:0022626
ribosome GO GO:0005840
structural constituent of ribosome GO GO:0003735
intracellular PFAM PF00827
intracellular Panther PTHR11847
60s ribosomal protein L15 KOG KOG1678
large subunit ribosomal protein L15e KO K02877
Ribosomal protein L23/L15e family protein AT AT4G16720

Glyma01g41630

Phosphatidylserine decarboxylase PFAM PF02666
PHOSPHATIDYLSERINE DECARBOXYLASE Panther PTHR10067
Phosphatidylserine decarboxylase KOG KOG2420
Phosphatidylserine decarboxylase. EC 4.1.1.65
E4.1.1.65, psd; phosphatidylserine decarboxylase [EC:4.1.1.65 ] [COG:COG0688 ] [GO:0004609 ] KO K01613
phosphatidylserine decarboxylase activity PFAM PF02666
phosphatidylserine decarboxylase activity Panther PTHR10067
Phosphatidylserine decarboxylase KOG KOG2420
phosphatidylserine decarboxylase EC 4.1.1.65
phosphatidylserine decarboxylase [EC:4.1.1.65] KO K01613
phosphatidylserine decarboxylase 1 AT AT4G16700

Glyma01g41640

Plant pleckstrin homology-like region PFAM PF08458
Plant protein of unknown function (DUF828) PFAM PF05703
Plant pleckstrin homology-like region PFAM PF08458
Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region AT AT4G17350

Glyma01g41650

Formyl transferase PFAM PF00551
PHOSPHORIBOSYLAMINE-GLYCINE LIGASE Panther PTHR10520
5'-phosphoribosylglycinamide formyltransferase KOG KOG3076
biosynthetic process PFAM PF00551
PHOSPHORIBOSYLAMINE-GLYCINE LIGASE Panther PTHR10520
5'-phosphoribosylglycinamide formyltransferase KOG KOG3076
Formyl transferase AT AT4G17360

Glyma01g41660

Anticodon-binding domain PFAM PF08264
ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES Panther PTHR11946
Leucyl-tRNA synthetase KOG KOG0437
Activity=leucine-tRNA ligase; Pathway=tRNA charging SoyCyc TRNA-CHARGING-PWY
Activity=leucine-tRNA ligase; Pathway=tRNA charging pathway SoyCyc TRNA-CHARGING-PWY
aminoacyl-tRNA ligase activity PFAM PF00133
aminoacyl-tRNA ligase activity PFAM PF09334
cysteine-tRNA ligase activity PFAM PF01406
aminoacyl-tRNA ligase activity PFAM PF08264
ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES Panther PTHR11946
Leucyl-tRNA synthetase KOG KOG0437
leucineÂ—tRNA ligase EC 6.1.1.4
leucyl-tRNA synthetase [EC:6.1.1.4] KO K01869
ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases AT AT1G09620

Glyma01g41670

Major intrinsic protein PFAM PF00230
AQUAPORIN TRANSPORTER Panther PTHR19139
Aquaporin (major intrinsic protein family) KOG KOG0223
aquaporin TIP KO K09873
transport PFAM PF00230
transport Panther PTHR19139
Aquaporin (major intrinsic protein family) KOG KOG0223
aquaporin TIP KO K09873
tonoplast intrinsic protein 2;3 AT AT5G47450

Glyma01g41680

Protein of unknown function, DUF547 PFAM PF04784
UNCHARACTERIZED Panther PTHR23054
Protein of unknown function, DUF547 PFAM PF04784
UNCHARACTERIZED Panther PTHR23054
Protein of unknown function, DUF547 AT AT5G47380

Glyma01g41690

Sybindin-like family PFAM PF04099
SYNBINDIN Panther PTHR23249
Transport protein particle (TRAPP) complex subunit KOG KOG3368
ER to Golgi vesicle-mediated transport GO GO:0006888
transport GO GO:0006810
cis-Golgi network GO GO:0005801
molecular_function GO GO:0003674
cis-Golgi network PFAM PF04099
ER to Golgi vesicle-mediated transport PFAM PF04628
cis-Golgi network Panther PTHR23249
Transport protein particle (TRAPP) complex subunit KOG KOG3368
SNARE-like superfamily protein AT AT1G51160

Glyma01g41700

POLYKETIDE SYNTHASE Panther PTHR11968:SF26
POLYKETIDE SYNTHASE Panther PTHR11968:SF26
AMP-dependent synthetase and ligase family protein AT AT1G21540

Glyma01g41721

RNA binding PFAM PF05641
G2484-1 protein AT AT4G17330

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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