Genes Covered By A Chromosome Alteration FN0140181.07.M3.1

Gene Name

Gene Annotation

Glyma06g32470

SOUL heme-binding protein PFAM PF04832
HEME-BINDING PROTEIN-RELATED Panther PTHR11220
SOUL heme-binding protein PFAM PF04832
HEME-BINDING PROTEIN-RELATED Panther PTHR11220
SOUL heme-binding family protein AT AT1G17100

Glyma06g32480

SOUL heme-binding protein PFAM PF04832
HEME-BINDING PROTEIN-RELATED Panther PTHR11220
SOUL heme-binding protein PFAM PF04832
HEME-BINDING PROTEIN-RELATED Panther PTHR11220
SOUL heme-binding family protein AT AT1G17100

Glyma06g32680

Plug domain of Sec61p PFAM PF10559
SECY/SEC61-ALPHA FAMILY MEMBER Panther PTHR10906
Transport protein Sec61, alpha subunit KOG KOG1373
protein transport protein SEC61 subunit alpha KO K10956
plasma membrane GO GO:0005886
mitochondrion GO GO:0005739
protein transport GO GO:0015031
membrane GO GO:0016020
P-P-bond-hydrolysis-driven protein transmembrane transporter activity GO GO:0015450
protein secretion GO GO:0009306
Plug domain of Sec61p PFAM PF10559
protein transport PFAM PF00344
protein transport Panther PTHR10906
Transport protein Sec61, alpha subunit KOG KOG1373
protein transport protein SEC61 subunit alpha KO K10956
SecY protein transport family protein AT AT2G34250

Glyma06g32686

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
cytochrome P450, family 72, subfamily A, polypeptide 14 AT AT3G14680

Glyma06g32693

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
cytochrome P450, family 72, subfamily A, polypeptide 15 AT AT3G14690

Glyma06g32700

Plant protein of unknown function (DUF641) PFAM PF04859
Plant protein of unknown function (DUF641) PFAM PF04859
Plant protein of unknown function (DUF641) AT AT1G53380

Glyma06g32710

Glyma06g32725

Glyma06g32741

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Pentatricopeptide repeat (PPR) superfamily protein AT AT1G53330

Glyma06g32756

ARM repeat superfamily protein AT AT1G76390

Glyma06g32771

Glyma06g32786

Glyma06g32802

NADH dehydrogenase (ubiquinone) activity PFAM PF01010
NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein AT ATCG01010

Glyma06g32818

HELICASE-RELATED Panther PTHR10492

Glyma06g32834

PIF1 helicase PFAM PF05970
HELICASE-RELATED Panther PTHR10492
PIF1 helicase AT AT3G51700

Glyma06g32850

Tetratricopeptide repeat PFAM PF00515
ANAPHASE PROMOTING COMPLEX SUBUNIT Panther PTHR12558
Anaphase-promoting complex (APC), Cdc16 subunit KOG KOG1173
APC6, CDC16; anaphase-promoting complex component APC6 [GO:0004842 ] KO K03353
regulation of DNA endoreduplication GO GO:0032875
cell cycle GO GO:0007049
phloem or xylem histogenesis GO GO:0010087
cellular_component GO GO:0005575
binding GO GO:0005488
Tetratricopeptide repeat PFAM PF07719
protein binding PFAM PF00515
ANAPHASE PROMOTING COMPLEX SUBUNIT Panther PTHR12558
Anaphase-promoting complex (APC), Cdc16 subunit KOG KOG1173
anaphase-promoting complex subunit 6 KO K03353
anaphase promoting complex 6 AT AT1G78770

Glyma06g32860

Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A PFAM PF12222
Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein AT AT3G14920

Glyma06g32870

FAMILY NOT NAMED Panther PTHR12472
RAB3-GAP REGULATORY DOMAIN Panther PTHR12472
AT AT3G14910

Glyma06g33080

Polynucleotide kinase 3 phosphatase PFAM PF08645
POLYNUCLEOTIDE KINASE- 3'-PHOSPHATASE Panther PTHR12083
Polynucleotide 5'-hydroxyl-kinase. EC 2.7.1.78
bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78] KO K08073
Polynucleotide 3'-phosphatase. EC 3.1.3.32
KO K08075
Polynucleotide kinase 3 phosphatase PFAM PF08645
POLYNUCLEOTIDE KINASE- 3'-PHOSPHATASE Panther PTHR12083
phosphoesterase AT AT3G14890

Glyma06g33101

AT AT1G78810

Glyma06g33120

Glyma06g33130

GRAM domain PFAM PF02893
GRAM domain PFAM PF02893
FH interacting protein 1 AT AT1G28200

Glyma06g33192

PIF1 helicase PFAM PF05970
viral genome replication PFAM PF02689
HELICASE-RELATED Panther PTHR10492
PIF1 helicase AT AT3G51690

Glyma06g33254

HELICASE-RELATED Panther PTHR10492

Glyma06g33317

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
RING FINGER PROTEIN 24-RELATED Panther PTHR22766
RING/U-box superfamily protein AT AT1G53190

Glyma06g33380

Phosphoenolpyruvate carboxylase PFAM PF00311
Phosphoenolpyruvate carboxylase. EC 4.1.1.31
E4.1.1.31, ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31 ] [COG:COG2352 ] [GO:0008964 ] KO K01595
chloroplast GO GO:0009507
plasma membrane GO GO:0005886
C4 photosynthesis GO GO:0009760
catalytic activity GO GO:0003824
phloem loading GO GO:0009915
protein binding GO GO:0005515
cytosol GO GO:0005829
apoplast GO GO:0048046
carbon fixation GO GO:0015977
tricarboxylic acid cycle GO GO:0006099
phosphoenolpyruvate carboxylase activity GO GO:0008964
Activity=Phosphoenolpyruvate carboxylase; Pathway=glutamine biosynthesis III SoyCyc PWY-6549
Activity=Phosphoenolpyruvate carboxylase; Pathway=gluconeogenesis I SoyCyc GLUCONEO-PWY
Activity=Phosphoenolpyruvate carboxylase; Pathway=CO₂ fixation into oxaloacetate (anapleurotic) SoyCyc PWYQT-4429
Activity=Phosphoenolpyruvate carboxylase; Pathway=Gluconeogenesis SoyCyc GLUCONEO-PWY
Activity=Phosphoenolpyruvate carboxylase; Pathway=C4 photosynthetic carbon assimilation cycle SoyCyc PWY-241
phosphoenolpyruvate carboxylase activity PFAM PF00311
phosphoenolpyruvate carboxylase EC 4.1.1.31
phosphoenolpyruvate carboxylase [EC:4.1.1.31] KO K01595
phosphoenolpyruvate carboxylase 3 AT AT3G14940

Glyma06g33495

NUCLEAR PROTEIN 95 Panther PTHR14140
RING/FYVE/PHD zinc finger superfamily protein AT AT1G43770

Glyma06g33611

mTERF PFAM PF02536
NUCLEOLAR COMPLEX PROTEIN 4 Panther PTHR12455
CCAAT-binding factor AT AT2G17250

Glyma06g33725

Glyma06g33840

Ubiquitin-conjugating enzyme PFAM PF00179
UBIQUITIN-CONJUGATING ENZYME E2 Panther PTHR11621
Ubiquitin-protein ligase KOG KOG0417
Ubiquitin--protein ligase. EC 6.3.2.19
ubiquitin-conjugating enzyme E2 N [EC:6.3.2.19] KO K10580
protein K63-linked ubiquitination GO GO:0070534
positive regulation of ubiquitin-protein ligase activity GO GO:0051443
positive regulation of NF-kappaB transcription factor activity GO GO:0051092
T cell receptor signaling pathway GO GO:0050852
positive regulation of DNA repair GO GO:0045739
post-translational protein modification GO GO:0043687
ubiquitin binding GO GO:0043130
positive regulation of I-kappaB kinase/NF-kappaB cascade GO GO:0043123
regulation of histone ubiquitination GO GO:0033182
UBC13-UEV1A complex GO GO:0035370
positive regulation of histone modification GO GO:0031058
acid-amino acid ligase activity GO GO:0016881
histone ubiquitination GO GO:0016574
ligase activity GO GO:0016874
DNA repair GO GO:0006281
cytosol GO GO:0005829
nucleus GO GO:0005634
cytoplasm GO GO:0005737
ATP binding GO GO:0005524
MyD88-dependent toll-like receptor signaling pathway GO GO:0002755
DNA double-strand break processing GO GO:0000729
double-strand break repair via homologous recombination GO GO:0000724
nucleotide binding GO GO:0000166
ubiquitin ligase complex GO GO:0000151
postreplication repair GO GO:0006301
response to cadmium ion GO GO:0046686
root epidermal cell differentiation GO GO:0010053
response to iron ion GO GO:0010039
UBC13-MMS2 complex GO GO:0031372
plasma membrane GO GO:0005886
protein binding GO GO:0005515
ubiquitin-dependent protein catabolic process GO GO:0006511
ubiquitin-protein ligase activity GO GO:0004842
protein ubiquitination GO GO:0016567
acid-amino acid ligase activity PFAM PF00179
UBIQUITIN-CONJUGATING ENZYME E2 Panther PTHR11621
Ubiquitin-protein ligase KOG KOG0417
ubiquitinÂ—protein ligase EC 6.3.2.19
ubiquitin-conjugating enzyme E2 N [EC:6.3.2.19] KO K10580
ubiquitin-conjugating enzyme 36 AT AT1G16890

Glyma06g33850

Thioredoxin PFAM PF00085
CHAPERONE BINDING PROTEIN Panther PTHR22904
Thioredoxin KOG KOG0907
protein binding PFAM PF00515
cell redox homeostasis PFAM PF00085
CHAPERONE BINDING PROTEIN Panther PTHR22904
Thioredoxin KOG KOG0907
tetratricopetide-repeat thioredoxin-like 1 AT AT1G53300

Glyma06g33880

Galactosyltransferase PFAM PF01762
BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE Panther PTHR11214
Galactosyltransferases KOG KOG2288
galactosyltransferase activity PFAM PF01762
galactosyltransferase activity Panther PTHR11214
Galactosyltransferases KOG KOG2288
Galactosyltransferase family protein AT AT1G53290

Glyma06g33920

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Protein kinase superfamily protein AT AT1G16670

Glyma06g33940

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 KOG KOG4205
nucleic acid binding PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 KOG KOG4205
RNA-binding (RRM/RBD/RNP motifs) family protein AT AT3G15010

Glyma06g33960

Glyma06g33970

AT AT2G31130

Glyma06g33980

Arabidopsis proteins of unknown function PFAM PF03005
SUBFAMILY NOT NAMED Panther PTHR14469:SF1
Arabidopsis proteins of unknown function PFAM PF03005
SUBFAMILY NOT NAMED Panther PTHR14469:SF1
Plant protein of unknown function (DUF828) AT AT1G73140

Glyma06g34190

lactate/malate dehydrogenase, alpha/beta C-terminal domain PFAM PF02866
MALATE AND LACTATE DEHYDROGENASE Panther PTHR11540
NAD-dependent malate dehydrogenase KOG KOG1494
Malate dehydrogenase. EC 1.1.1.37
E1.1.1.37B, mdh; malate dehydrogenase [EC:1.1.1.37 ] [COG:COG0039 ] [GO:0030060 ] KO K00026
membrane GO GO:0016020
apoplast GO GO:0048046
malate dehydrogenase activity GO GO:0016615
copper ion binding GO GO:0005507
chloroplast GO GO:0009507
response to salt stress GO GO:0009651
defense response to bacterium GO GO:0042742
cell wall GO GO:0005618
response to cadmium ion GO GO:0046686
response to cold GO GO:0009409
mitochondrion GO GO:0005739
Activity=malate dehydrogenase; Pathway=gluconeogenesis I SoyCyc GLUCONEO-PWY
Activity=malate dehydrogenase; Pathway=aspartate degradation II SoyCyc MALATE-ASPARTATE-SHUTTLE-PWY
Activity=malate dehydrogenase; Pathway=superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle SoyCyc PWY-5464
Activity=malate dehydrogenase; Pathway=superpathway of glyoxylate cycle and fatty acid degradation SoyCyc PWY-561
Activity=malate dehydrogenase; Pathway=glyoxylate cycle SoyCyc GLYOXYLATE-BYPASS
Activity=malate dehydrogenase; Pathway=TCA cycle II (eukaryotic) SoyCyc PWY-5690
Activity=malate dehydrogenase; Pathway=TCA cycle variation III eukaryotic SoyCyc PWY-5690
Activity=malate dehydrogenase; Pathway=Gluconeogenesis SoyCyc GLUCONEO-PWY
Activity=malate dehydrogenase; Pathway=aspartate degradation II SoyCyc MALATE-ASPARTATE-SHUTTLE-PWY
oxidoreductase activity PFAM PF00056
lactate/malate dehydrogenase, alpha/beta C-terminal domain PFAM PF02866
MALATE AND LACTATE DEHYDROGENASE Panther PTHR11540
NAD-dependent malate dehydrogenase KOG KOG1494
malate dehydrogenase EC 1.1.1.37
malate dehydrogenase [EC:1.1.1.37] KO K00026
Lactate/malate dehydrogenase family protein AT AT1G53240

Glyma06g34210

YEATS DOMAIN Panther PTHR23195
nucleus Panther PTHR23195
YEATS family protein AT AT5G45600

Glyma06g34225

26S PROTEASOME REGULATORY SUBUNIT Panther PTHR10943
26S proteasome regulatory subunit S2 1A AT AT2G20580

Glyma06g34240

Glyma06g34250

FAMILY NOT NAMED Panther PTHR20953
PFAM PF00437
ATP binding PFAM PF00004
ATPase family associated with various cellular activities (AAA) PFAM PF07728
KINASE-RELATED Panther PTHR20953
P-loop containing nucleoside triphosphate hydrolases superfamily protein AT AT1G73170

Glyma06g34285

Glyma06g34320

Glyma06g34330

TCP family transcription factor PFAM PF03634
TCP family transcription factor PFAM PF03634
TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 AT AT1G53230

Glyma06g34387

IQ-domain 10 AT AT3G15050

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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