Genes Covered By A Chromosome Alteration FN0132790.05.03.M4.3

Gene Name

Gene Annotation

Glyma18g53450

CYTOCHROME P450 Panther PTHR19383
cytokinin trans-hydroxylase KO K10717
Cytochrome P450 PFAM PF00067
Cytochrome P450 CYP4/CYP19/CYP26 subfamilies KOG KOG0157
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP4/CYP19/CYP26 subfamilies KOG KOG0157
cytokinin trans-hydroxylase KO K10717
cytochrome P450, family 735, subfamily A, polypeptide 1 AT AT5G38450

Glyma18g53460

IPP transferase PFAM PF01715
TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATED Panther PTHR11088
tRNA delta(2)-isopentenylpyrophosphate transferase KOG KOG1384
PFAM PF01745
tRNA processing PFAM PF01715
tRNA processing Panther PTHR11088
tRNA delta(2)-isopentenylpyrophosphate transferase KOG KOG1384
isopentenyltransferase 5 AT AT5G19040

Glyma18g53470

UBA/TS-N domain PFAM PF00627
UV EXCISION REPAIR PROTEIN RAD23 Panther PTHR10621
Nucleotide excision repair factor NEF2, RAD23 component KOG KOG0011
protein binding PFAM PF00240
protein binding PFAM PF00627
proteasomal ubiquitin-dependent protein catabolic process PFAM PF09280
UV EXCISION REPAIR PROTEIN RAD23 Panther PTHR10621
Nucleotide excision repair factor NEF2, RAD23 component KOG KOG0011
Rad23 UV excision repair protein family AT AT5G38470

Glyma18g53480

Eukaryotic protein of unknown function, DUF292 PFAM PF03398
UNCHARACTERIZED DUF292 Panther PTHR12161
Regulator of Vps4 activity in the MVB pathway PFAM PF03398
UNCHARACTERIZED DUF292 Panther PTHR12161
Regulator of Vps4 activity in the MVB pathway protein AT AT1G13340

Glyma18g53490

AT AT2G43780

Glyma18g53500

AT AT5G49210

Glyma18g53510

Oxidoreductase NAD-binding domain PFAM PF00175
NADPH FLAVIN OXIDOREDUCTASE Panther PTHR19384
NADP-dependent flavoprotein reductase KOG KOG1159
FMN binding PFAM PF00258
oxidoreductase activity PFAM PF00667
oxidoreductase activity PFAM PF00175
NADPH FLAVIN OXIDOREDUCTASE Panther PTHR19384
NADP-dependent flavoprotein reductase KOG KOG1159
Flavodoxin family protein AT AT3G02280

Glyma18g53545

HYPOTHETICAL HEAT DOMAIN-CONTAINING Panther PTHR21663
Uncharacterized conserved protein KOG KOG1822
HEAT repeat-containing protein AT AT1G67140

Glyma18g53580

alpha/beta hydrolase fold PFAM PF07859
MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Panther PTHR23024
Arylacetamide deacetylase KOG KOG1515
Carboxylesterase PFAM PF00135
PFAM PF10340
hydrolase activity PFAM PF07859
MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Panther PTHR23024
Arylacetamide deacetylase KOG KOG1515
carboxyesterase 17 AT AT5G16080

Glyma18g53590

TCP-1/cpn60 chaperonin family PFAM PF00118
CHAPERONIN Panther PTHR11353
Chaperonin complex component, TCP-1 zeta subunit (CCT6) KOG KOG0359
cellular protein metabolic process GO GO:0044267
cellular_component GO GO:0005575
protein folding GO GO:0006457
membrane GO GO:0016020
response to zinc ion GO GO:0010043
unfolded protein binding GO GO:0051082
cytoplasm GO GO:0005737
response to cadmium ion GO GO:0046686
ATP binding GO GO:0005524
cellular protein metabolic process PFAM PF00118
cellular protein metabolic process Panther PTHR11353
Chaperonin complex component, TCP-1 zeta subunit (CCT6) KOG KOG0359
TCP-1/cpn60 chaperonin family protein AT AT3G02530

Glyma18g53600

Zinc-binding dehydrogenase PFAM PF00107
ALCOHOL DEHYDROGENASE RELATED Panther PTHR11695
Predicted NAD-dependent oxidoreductase KOG KOG1196
2-alkenal reductase EC 1.3.1.74
2-alkenal reductase [EC:1.3.1.74] KO K08070
oxidoreductase activity PFAM PF00107
oxidoreductase activity Panther PTHR11695
Predicted NAD-dependent oxidoreductase KOG KOG1196
2-alkenal reductase EC 1.3.1.74
2-alkenal reductase [EC:1.3.1.74] KO K08070
Zinc-binding dehydrogenase family protein AT AT1G65560

Glyma18g53610

14-3-3 protein PFAM PF00244
14-3-3 Panther PTHR18860
Multifunctional chaperone (14-3-3 family) KOG KOG0841
ATP binding GO GO:0005524
mitochondrion GO GO:0005739
vacuole GO GO:0005773
response to cadmium ion GO GO:0046686
chloroplast stroma GO GO:0009570
cell wall GO GO:0005618
chloroplast GO GO:0009507
plasma membrane GO GO:0005886
protein phosphorylated amino acid binding GO GO:0045309
protein binding GO GO:0005515
nuclear envelope GO GO:0005635
cytoplasm GO GO:0005737
14-3-3 protein PFAM PF00244
protein domain specific binding Panther PTHR18860
Multifunctional chaperone (14-3-3 family) KOG KOG0841
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein KO K06630
general regulatory factor 7 AT AT3G02520

Glyma18g53630

Uncharacterized conserved protein (DUF2261) PFAM PF10019
Uncharacterized conserved protein KOG KOG4683
Protein of unknown function (DUF1624) PFAM PF07786
Uncharacterized conserved protein KOG KOG4683
Protein of unknown function (DUF1624) AT AT5G47900

Glyma18g53640

SNARE associated Golgi protein PFAM PF09335
UNCHARACTERIZED Panther PTHR12677
SNARE associated Golgi protein PFAM PF09335
UNCHARACTERIZED Panther PTHR12677
SNARE associated Golgi protein family AT AT1G44960

Glyma18g53650

no exine formation 1 AT AT5G13390

Glyma18g53680

Phosphatidylethanolamine-binding protein PFAM PF01161
PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN Panther PTHR11362
Phosphatidylethanolamine binding protein KOG KOG3346
Phosphatidylethanolamine-binding protein PFAM PF01161
PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN Panther PTHR11362
Phosphatidylethanolamine binding protein KOG KOG3346
PEBP (phosphatidylethanolamine-binding protein) family protein AT AT4G20370

Glyma18g53690

Phosphatidylethanolamine-binding protein PFAM PF01161
PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN Panther PTHR11362
Phosphatidylethanolamine binding protein KOG KOG3346
Phosphatidylethanolamine-binding protein PFAM PF01161
PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN Panther PTHR11362
Phosphatidylethanolamine binding protein KOG KOG3346
PEBP (phosphatidylethanolamine-binding protein) family protein AT AT4G20370

Glyma18g53700

Transaldolase PFAM PF00923
TRANSALDOLASE Panther PTHR10683
Transaldolase KOG KOG2772
Transaldolase. EC 2.2.1.2
E2.2.1.2, talA, talB; transaldolase [EC:2.2.1.2 ] [COG:COG0176 ] [GO:0004801 ] KO K00616
response to cadmium ion GO GO:0046686
chloroplast GO GO:0009507
chloroplast stroma GO GO:0009570
mitochondrion GO GO:0005739
catalytic activity GO GO:0003824
sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity GO GO:0004801
carbohydrate metabolic process PFAM PF00923
carbohydrate metabolic process Panther PTHR10683
Transaldolase KOG KOG2772
transaldolase EC 2.2.1.2
transaldolase [EC:2.2.1.2] KO K00616
Aldolase-type TIM barrel family protein AT AT5G13420

Glyma18g53710

POT family PFAM PF00854
OLIGOPEPTIDE TRANSPORTER-RELATED Panther PTHR11654
H+/oligopeptide symporter KOG KOG1237
oligopeptide transport PFAM PF00854
OLIGOPEPTIDE TRANSPORTER-RELATED Panther PTHR11654
H+/oligopeptide symporter KOG KOG1237
Major facilitator superfamily protein AT AT5G13400

Glyma18g53720

Lipase (class 3) PFAM PF01764
Predicted lipase KOG KOG4569
Activity=triacylglycerol lipase; Pathway=triacylglycerol degradation SoyCyc LIPAS-PWY
Activity=triacylglycerol lipase; Pathway=triacylglycerol degradation SoyCyc LIPAS-PWY
triglyceride lipase activity PFAM PF01764
Predicted lipase KOG KOG4569
alpha/beta-Hydrolases superfamily protein AT AT1G05800

Glyma18g53730

Got1-like family PFAM PF04178
CGI-141-RELATED/LIPASE CONTAINING PROTEIN Panther PTHR21493
Ferric reductase-like proteins KOG KOG1743
vesicle-mediated transport PFAM PF04178
CGI-141-RELATED/LIPASE CONTAINING PROTEIN Panther PTHR21493
Ferric reductase-like proteins KOG KOG1743
Got1/Sft2-like vescicle transport protein family AT AT1G05785

Glyma18g53740

Glyma18g53750

ENTH domain PFAM PF01417
EPSIN/ENT-RELATED Panther PTHR12276
Equilibrative nucleoside transporter protein KOG KOG2056
ENTH domain PFAM PF01417
phospholipid binding PFAM PF07651
EPSIN/ENT-RELATED Panther PTHR12276
Equilibrative nucleoside transporter protein KOG KOG2056
ENTH/VHS family protein AT AT2G43160

Glyma18g53760

ISOCITRATE LYASE/MALATE SYNTHASE Panther PTHR21631
Isocitrate lyase KOG KOG1260
catalytic activity PFAM PF00463
ISOCITRATE LYASE/MALATE SYNTHASE Panther PTHR21631
Isocitrate lyase KOG KOG1260
Phosphoenolpyruvate carboxylase family protein AT AT2G43180

Glyma18g53770

Integral membrane protein DUF6 PFAM PF00892
DUF914-RELATED Panther PTHR14233
Predicted membrane protein KOG KOG2766
Eukaryotic protein of unknown function (DUF914) PFAM PF06027
Integral membrane protein DUF6 PFAM PF00892
transmembrane transport PFAM PF08449
Protein of unknown function (DUF803) PFAM PF05653
DUF914-RELATED Panther PTHR14233
Predicted membrane protein KOG KOG2766
Eukaryotic protein of unknown function (DUF914) AT AT3G59340

Glyma18g53780

Methyltransferase domain PFAM PF08241
METHYLTRANSFERASE Panther PTHR10108
methyltransferase activity PFAM PF03141
Methyltransferase domain PFAM PF08241
METHYLTRANSFERASE Panther PTHR10108
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein AT AT2G43200

Glyma18g53795

AT AT1G27435

Glyma18g53810

Protein kinase domain PFAM PF00069
CASEIN KINASE-RELATED Panther PTHR11909
Casein kinase (serine/threonine/tyrosine protein kinase) KOG KOG1164
kinase activity GO GO:0016301
protein phosphorylation GO GO:0006468
protein serine/threonine kinase activity GO GO:0004674
ATP binding GO GO:0005524
protein kinase activity GO GO:0004672
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
CASEIN KINASE-RELATED Panther PTHR11909
Casein kinase (serine/threonine/tyrosine protein kinase) KOG KOG1164
Protein kinase family protein AT AT3G13670

Glyma18g53823

Vta1 like PFAM PF04652
1,3-beta-D-glucan synthase complex PFAM PF02364
UNCHARACTERIZED DUF605 Panther PTHR12741
1,3-beta-glucan synthase/callose synthase catalytic subunit KOG KOG0916
Hexosyltransferases. EC 2.4.1.-
callose synthase [EC:2.4.1.-] KO K11000
glucan synthase-like 12 AT AT5G13000

Glyma18g53836

ubiquitin-protein ligase activity PFAM PF04564
Zinc-finger of the MIZ type in Nse subunit PFAM PF11789
WDSAM1 PROTEIN Panther PTHR22849
Transducin/WD40 repeat-like superfamily protein AT AT3G06880

Glyma18g53850

POT family PFAM PF00854
OLIGOPEPTIDE TRANSPORTER-RELATED Panther PTHR11654
H+/oligopeptide symporter KOG KOG1237
oligopeptide transport PFAM PF00854
OLIGOPEPTIDE TRANSPORTER-RELATED Panther PTHR11654
H+/oligopeptide symporter KOG KOG1237
Major facilitator superfamily protein AT AT5G19640

Glyma18g53860

Pirin C-terminal cupin domain PFAM PF05726
PIRIN-RELATED Panther PTHR13903
MFS transporter, UMF1 family KO K06911
Pirin PFAM PF02678
Pirin C-terminal cupin domain PFAM PF05726
PIRIN-RELATED Panther PTHR13903
MFS transporter, UMF1 family KO K06911
RmlC-like cupins superfamily protein AT AT2G43120

Glyma18g53870

Miro-like protein PFAM PF08477
RAS-RELATED GTPASE Panther PTHR11708
GTPase Rab11/YPT3, small G protein superfamily KOG KOG0087
Rab family, other KO K07976
inter-Golgi cisterna vesicle-mediated transport GO GO:0048219
Golgi-associated vesicle GO GO:0005798
trans-Golgi network GO GO:0005802
response to heat GO GO:0009408
Golgi stack GO GO:0005795
GTP catabolic process GO GO:0006184
plasma membrane GO GO:0005886
protein transport GO GO:0015031
chloroplast GO GO:0009507
GTPase activity GO GO:0003924
small GTPase mediated signal transduction GO GO:0007264
GTP binding GO GO:0005525
GTP binding PFAM PF00025
Ras family PFAM PF00071
Miro-like protein PFAM PF08477
RAS-RELATED GTPASE Panther PTHR11708
GTPase Rab11/YPT3, small G protein superfamily KOG KOG0087
Rab family, other KO K07976
RAB GTPase homolog A5D AT AT2G31680

Glyma18g53880

Signal peptide peptidase PFAM PF04258
SIGNAL PEPTIDE PEPTIDASE Panther PTHR12174
Uncharacterized conserved protein, contains PA domain KOG KOG2442
PA domain PFAM PF02225
aspartic-type endopeptidase activity PFAM PF04258
aspartic-type endopeptidase activity Panther PTHR12174
Uncharacterized conserved protein, contains PA domain KOG KOG2442
SIGNAL PEPTIDE PEPTIDASE-LIKE 3 AT AT2G43070

Glyma18g53890

Pollen proteins Ole e I like PFAM PF01190
Pollen Ole e 1 allergen and extensin family protein AT AT5G13140

Glyma18g53900

Auxin responsive protein PFAM PF02519
Auxin responsive protein PFAM PF02519
SAUR family protein KO K14488
SAUR-like auxin-responsive protein family AT AT5G50760

Glyma18g53930

MtN3/saliva family PFAM PF03083
STROMAL CELL PROTEIN/NODULIN MTN3-RELATED Panther PTHR10791
Multitransmembrane protein KOG KOG1623
integral to plasma membrane GO GO:0005887
sugar transmembrane transporter activity GO GO:0051119
integral to membrane PFAM PF03083
integral to membrane Panther PTHR10791
Multitransmembrane protein KOG KOG1623
senescence-associated gene 29 AT AT5G13170

Glyma18g53940

MtN3/saliva family PFAM PF03083
STROMAL CELL PROTEIN/NODULIN MTN3-RELATED Panther PTHR10791
Multitransmembrane protein KOG KOG1623
integral to membrane PFAM PF03083
PQ loop repeat PFAM PF04193
integral to membrane Panther PTHR10791
Multitransmembrane protein KOG KOG1623
senescence-associated gene 29 AT AT5G13170

Glyma18g53947

Glyma18g53954

regulation of transcription, DNA-dependent PFAM PF02365
NAC domain containing protein 83 AT AT5G13180

Glyma18g53962

protein binding PFAM PF03114
hydroxyproline-rich glycoprotein family protein AT AT2G33490

Glyma18g53970

Leucine Rich Repeat PFAM PF00560
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Leucine rich repeat N-terminal domain PFAM PF08263
protein binding PFAM PF00560
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Leucine-rich repeat (LRR) family protein AT AT5G21090

Glyma18g53990

LITAF-like zinc finger domain PFAM PF10601
LIPOPOLYSACCHARIDE-INDUCED TRANSCRIPTION FACTOR REGULATING TUMOR NECROSIS FACTOR ALPHA Panther PTHR23292
LITAF-like zinc ribbon domain PFAM PF10601
LIPOPOLYSACCHARIDE-INDUCED TRANSCRIPTION FACTOR REGULATING TUMOR NECROSIS FACTOR ALPHA Panther PTHR23292
AT AT5G13190

Glyma18g54001

Nucleic acid-binding, OB-fold-like protein AT AT2G05642

Glyma18g54010

AT AT2G33510

Glyma18g54020

CDP-alcohol phosphatidyltransferase PFAM PF01066
CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED Panther PTHR14269
CDP-alcohol phosphatidyltransferase/Phosphatidylglycerol-phosphate synthase KOG KOG1617
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. EC 2.7.8.5
E2.7.8.5, pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5 ] [COG:COG0558 ] [GO:0008444 ] KO K00995
Activity=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Pathway=phospholipid biosynthesis II SoyCyc PHOSLIPSYN2-PWY
Activity=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Pathway=cardiolipin biosynthesis II SoyCyc PWY-5269
Activity=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Pathway=phosphatidylglycerol biosynthesis I (plastidic) SoyCyc PWY4FS-7
Activity=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Pathway=phosphatidylglycerol biosynthesis II (non-plastidic) SoyCyc PWY4FS-8
Activity=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Pathway=phospholipid biosynthesis II SoyCyc PHOSLIPSYN2-PWY
Activity=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Pathway=cardiolipin biosynthesis II SoyCyc PWY-5269
phosphotransferase activity, for other substituted phosphate groups PFAM PF01066
CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED Panther PTHR14269
CDP-alcohol phosphatidyltransferase/Phosphatidylglycerol-phosphate synthase KOG KOG1617
CDP-diacylglycerolÂ—glycerol-3-phosphate 3-phosphatidyltransferase EC 2.7.8.5
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] KO K00995
phosphatidylglycerolphosphate synthase 1 AT AT2G39290

Glyma18g54070

Microtubule associated protein (MAP65/ASE1 family) PFAM PF03999
PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED Panther PTHR19321
Microtubule associated protein (MAP65/ASE1) family protein AT AT2G01910

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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