Genes Covered By A Chromosome Alteration FN0124543.02.01.02.M5.3

Gene Name

Gene Annotation

Glyma06g04510

SPRY domain PFAM PF00622
protein binding PFAM PF00622
AT AT4G06534

Glyma06g04520

Kinesin motor domain PFAM PF00225
KINESIN HEAVY CHAIN Panther PTHR16012
Kinesin-like protein KOG KOG0244
microtubule motor activity PFAM PF00225
KINESIN HEAVY CHAIN Panther PTHR16012
Kinesin-like protein KOG KOG0244
P-loop containing nucleoside triphosphate hydrolases superfamily protein AT AT5G47820

Glyma06g04530

Leucine Rich Repeat PFAM PF00560
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
protein binding PFAM PF00560
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase/TGF-beta stimulated factor KOG KOG2345
Leucine-rich repeat protein kinase family protein AT AT5G67200

Glyma06g04540

Papain family cysteine protease PFAM PF00112
CYSTEINE PROTEASE FAMILY C1-RELATED Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
cysteine-type peptidase activity PFAM PF00112
cysteine-type peptidase activity Panther PTHR12411
Cysteine proteinase Cathepsin L KOG KOG1543
Granulin repeat cysteine protease family protein AT AT1G47128

Glyma06g04550

NUCLEAR RECEPTOR BINDING PROTEIN-RELATED Panther PTHR13902:SF3
NUCLEAR RECEPTOR BINDING PROTEIN-RELATED Panther PTHR13902:SF3
Serine/threonine-protein kinase WNK (With No Lysine)-related AT AT1G60060

Glyma06g04560

F-BOX/LEUCINE RICH REPEAT PROTEIN Panther PTHR23125
protein binding PFAM PF00646
F-BOX/LEUCINE RICH REPEAT PROTEIN Panther PTHR23125
VIER F-box proteine 3 AT AT4G07400

Glyma06g04575

Cyclin, N-terminal domain PFAM PF00134
nucleus PFAM PF02984
CYCLINS Panther PTHR10177
G1/S-specific cyclin D KOG KOG0656
CYCLIN D3;1 AT AT4G34160

Glyma06g04590

Asparaginase PFAM PF01112
PROTEASE T2 ASPARAGINASE Panther PTHR10188
Asparaginase KOG KOG1592
Activity=asparaginase; Pathway=asparagine degradation I SoyCyc ASPARAGINE-DEG1-PWY
Activity=asparaginase; Pathway=superpathway of aspartate and asparagine biosynthesis interconversion of aspartate and asparagine. SoyCyc ASPASN-PWY
Activity=asparaginase; Pathway=asparagine degradation I SoyCyc ASPARAGINE-DEG1-PWY
hydrolase activity PFAM PF01112
hydrolase activity Panther PTHR10188
Asparaginase KOG KOG1592
N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein AT AT3G16150

Glyma06g04600

Domain of unknown function (DUF303) PFAM PF03629
Domain of unknown function (DUF303) PFAM PF03629
Domain of unknown function (DUF303) AT AT3G53010

Glyma06g04610

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
sugar binding PFAM PF01453
recognition of pollen PFAM PF00954
PAN-like domain PFAM PF08276
Protein tyrosine kinase PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
S-locus lectin protein kinase family protein AT AT2G19130

Glyma06g04620

MRG PFAM PF05712
MALE-SPECIFIC LETHAL-3 - RELATED Panther PTHR10880
RNA binding activity-knot of a chromodomain PFAM PF11717
nucleus PFAM PF05712
nucleus Panther PTHR10880
mortality factor 4-like protein 1 KO K11339
MRG family protein AT AT1G02740

Glyma06g04640

F-box domain PFAM PF00646
protein binding PFAM PF00646
F-box protein GID2 KO K14495
F-box family protein AT AT4G24210

Glyma06g04650

Glyma06g04660

NALP (NACHT, LEUCINE RICH REPEAT AND PYRIN DOMAIN CONTAINING)-RELATED Panther PTHR13824
NALP (NACHT, LEUCINE RICH REPEAT AND PYRIN DOMAIN CONTAINING)-RELATED Panther PTHR13824
WPP domain protein 2 AT AT1G47200

Glyma06g04670

WD domain, G-beta repeat PFAM PF00400
WD40 REPEAT PROTEIN Panther PTHR22846
Beta-transducin family (WD-40 repeat) protein KOG KOG0273
LisH PFAM PF08513
WD domain, G-beta repeat PFAM PF00400
WD40 REPEAT PROTEIN Panther PTHR22846
Beta-transducin family (WD-40 repeat) protein KOG KOG0273
WD-40 repeat family protein AT AT5G67320

Glyma06g04680

Cyclin, C-terminal domain PFAM PF02984
CYCLINS Panther PTHR10177
G2/Mitotic-specific cyclin A KOG KOG0654
Cyclin, N-terminal domain PFAM PF00134
nucleus PFAM PF02984
CYCLINS Panther PTHR10177
G2/Mitotic-specific cyclin A KOG KOG0654
CYCLIN A3;4 AT AT1G47230

Glyma06g04690

Cyclin, C-terminal domain PFAM PF02984
CYCLINS Panther PTHR10177
Cyclin, N-terminal domain PFAM PF00134
nucleus PFAM PF02984
CYCLINS Panther PTHR10177
Cyclin A3;1 AT AT5G43080

Glyma06g04705

UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Panther PTHR12183
Predicted E3 ubiquitin ligase KOG KOG4172
RING/U-box superfamily protein AT AT2G38185

Glyma06g04720

Natural resistance-associated macrophage protein PFAM PF01566
MANGANESE TRANSPORTER Panther PTHR11706
Mn2+ and Fe2+ transporters of the NRAMP family KOG KOG1291
metal ion transmembrane transporter activity GO GO:0046873
cellular metal ion homeostasis GO GO:0006875
inorganic anion transmembrane transporter activity GO GO:0015103
metal ion transport GO GO:0030001
transport PFAM PF01566
transport Panther PTHR11706
Mn2+ and Fe2+ transporters of the NRAMP family KOG KOG1291
NRAMP metal ion transporter 2 AT AT1G47240

Glyma06g04731

RNA binding PFAM PF00806
RNA BINDING PROTEIN PUMILIO-RELATED Panther PTHR12537
Translational repressor MPT5/PUF4 and related RNA-binding proteins (Puf superfamily) KOG KOG2049
pumilio 7 AT AT1G78160

Glyma06g04740

Gibberellin regulated protein PFAM PF02704
Gibberellin regulated protein PFAM PF02704
Gibberellin-regulated family protein AT AT5G59845

Glyma06g04751

differentiation and greening-like 1 AT AT2G33430

Glyma06g04760

NAD DEPENDENT EPIMERASE/DEHYDRATASE Panther PTHR10366
NAD DEPENDENT EPIMERASE/DEHYDRATASE Panther PTHR10366
NAD(P)-binding Rossmann-fold superfamily protein AT AT4G24220

Glyma06g04775

heme binding PFAM PF00173
CYTOCHROME B5 Panther PTHR19359
Sulfite oxidase, heme-binding component KOG KOG4576
cytochrome B5 isoform D AT AT5G48810

Glyma06g04790

Syntaxin 6, N-terminal PFAM PF09177
Golgi vesicle transport PFAM PF09177
Syntaxin/t-SNARE family protein AT AT1G27700

Glyma06g04800

Ankyrin repeat PFAM PF00023
ANKYRIN REPEAT-CONTAINING Panther PTHR18958
Guanidinoacetate methyltransferase and related proteins KOG KOG1709
protein binding PFAM PF00023
ANKYRIN REPEAT-CONTAINING Panther PTHR18958
Guanidinoacetate methyltransferase and related proteins KOG KOG1709
ankyrin repeat family protein AT AT5G65860

Glyma06g04810

PA domain PFAM PF02225
SUBTILISIN/KEXIN-RELATED SERINE PROTEASE Panther PTHR10795
identical protein binding PFAM PF05922
serine-type endopeptidase activity PFAM PF00082
PA domain PFAM PF02225
SUBTILISIN/KEXIN-RELATED SERINE PROTEASE Panther PTHR10795
Subtilase family protein AT AT5G67360

Glyma06g04820

Transcription initiation factor TFIID component TAF4 family PFAM PF05236
FAMILY NOT NAMED Panther PTHR15138
RST domain of plant C-terminal PFAM PF12174
transcription factor TFIID complex PFAM PF05236
FAMILY NOT NAMED Panther PTHR15138
TBP-associated factor 4 AT AT5G43130

Glyma06g04831

Family of unknown function (DUF566) PFAM PF04484
Family of unknown function (DUF566) AT AT3G19570

Glyma06g04840

Zinc finger, C2H2 type PFAM PF00096
ZINC FINGER PROTEIN Panther PTHR11389
ZINC FINGER PROTEIN Panther PTHR11389
salt tolerance zinc finger AT AT1G27730

Glyma06g04850

Phosphoribosyl transferase domain PFAM PF00156
Adenine phosphoribosyl transferases KOG KOG1712
Adenine phosphoribosyltransferase. EC 2.4.2.7
E2.4.2.7, apt; adenine phosphoribosyltransferase [EC:2.4.2.7 ] [COG:COG0503 ] [GO:0003999 ] KO K00759
Activity=adenine phosphoribosyltransferase; Pathway=purine nucleosides salvage II (plant) SoyCyc PWY-5043
Activity=adenine phosphoribosyltransferase; Pathway=adenine and adenosine salvage II SoyCyc PWY-6605
Activity=adenine phosphoribosyltransferase; Pathway=salvage pathways of adenine, hypoxanthine, and their nucleosides SoyCyc SALVADEHYPOX-PWY
Activity=adenine phosphoribosyltransferase; Pathway=salvage pathways of purine nucleosides II plant SoyCyc PWY-5043
nucleoside metabolic process PFAM PF00156
Adenine phosphoribosyl transferases KOG KOG1712
adenine phosphoribosyltransferase EC 2.4.2.7
adenine phosphoribosyltransferase [EC:2.4.2.7] KO K00759
adenine phosphoribosyl transferase 1 AT AT1G27450

Glyma06g04860

CUE domain PFAM PF02845
FAMILY NOT NAMED Panther PTHR21494
Transcription coactivator complex, P100 component KOG KOG4501
protein binding PFAM PF02845
ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 (ASC-1 COMPLEX SUBUNIT P100) Panther PTHR21494
Transcription coactivator complex, P100 component KOG KOG4501
Ubiquitin system component Cue protein AT AT1G27752

Glyma06g04870

F-box domain PFAM PF00646
protein binding PFAM PF00646
Galactose oxidase/kelch repeat superfamily protein AT AT5G43190

Glyma06g04881

Glyma06g04890

Armadillo/beta-catenin-like repeat PFAM PF00514
BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING Panther PTHR23315
Kinesin-associated protein (KAP) PFAM PF05804
protein binding PFAM PF00514
BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING Panther PTHR23315
ARM repeat superfamily protein AT AT3G01400

Glyma06g04900

Cation transporting ATPase, C-terminus PFAM PF00689
CATION-TRANSPORTING ATPASE Panther PTHR11939
Calcium transporting ATPase KOG KOG0204
calcium channel activity GO GO:0005262
endoplasmic reticulum GO GO:0005783
plasma membrane GO GO:0005886
chloroplast inner membrane GO GO:0009706
calmodulin binding GO GO:0005516
calcium ion transport GO GO:0006816
metabolic process GO GO:0008152
cation transport GO GO:0006812
calcium-transporting ATPase activity GO GO:0005388
ATP biosynthetic process GO GO:0006754
calcium ion transmembrane transport GO GO:0070588
Activity=calcium-transporting ATPase; Pathway=betanidin degradation SoyCyc PWY-5461
Ca2+-ATPase N terminal autoinhibitory domain PFAM PF12515
ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism PFAM PF00690
nucleotide binding PFAM PF00122
catalytic activity PFAM PF00702
ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism PFAM PF00689
CATION-TRANSPORTING ATPASE Panther PTHR11939
Calcium transporting ATPase KOG KOG0204
autoinhibited Ca2+-ATPase 1 AT AT1G27770

Glyma06g04910

Cyclin, N-terminal domain PFAM PF00134
CYCLINS Panther PTHR10177
G1/S-specific cyclin D KOG KOG0656
Cyclin, N-terminal domain PFAM PF00134
nucleus PFAM PF02984
CYCLINS Panther PTHR10177
G1/S-specific cyclin D KOG KOG0656
cyclin d5;1 AT AT4G37630
CDK8 kinase-activating protein cyclin C KOG KOG0794

Glyma06g04920

Interferon-related protein conserved region PFAM PF04836
INTERFERON-RELATED DEVELOPMENTAL REGULATOR-RELATED Panther PTHR12354
Interferon-related protein PC4 like KOG KOG2842
Interferon-related developmental regulator (IFRD) PFAM PF05004
Interferon-related protein conserved region PFAM PF04836
INTERFERON-RELATED DEVELOPMENTAL REGULATOR-RELATED Panther PTHR12354
Interferon-related protein PC4 like KOG KOG2842
interferon-related developmental regulator family protein / IFRD protein family AT AT1G27760

Glyma06g04930

WD domain, G-beta repeat PFAM PF00400
WD40 REPEAT FAMILY Panther PTHR22850
Transcription-coupled repair protein CSA, contains WD40 domain KOG KOG4283
DNA excision repair protein ERCC-8 KO K10570
WD domain, G-beta repeat PFAM PF00400
WD40 REPEAT FAMILY Panther PTHR22850
Transcription-coupled repair protein CSA, contains WD40 domain KOG KOG4283
DNA excision repair protein ERCC-8 KO K10570
Transducin/WD40 repeat-like superfamily protein AT AT1G27840

Glyma06g04941

protein binding PFAM PF00628
FAMILY NOT NAMED Panther PTHR22664
PHD finger transcription factor, putative AT AT5G58610

Glyma06g04950

Tetratricopeptide repeat PFAM PF00515
O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE, OGT Panther PTHR23083
Predicted calmodulin-binding protein KOG KOG4162
O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE, OGT Panther PTHR23083
Predicted calmodulin-binding protein KOG KOG4162
no pollen germination related 1 AT AT1G27460

Glyma06g04955

Glyma06g04960

ZCF37 AT AT1G59590

Glyma06g04970

Conserved hypothetical ATP binding protein PFAM PF03029
XPA-BINDING PROTEIN 1-RELATED Panther PTHR21231
Predicted GTPase KOG KOG1533
nucleotide binding PFAM PF03029
XPA-BINDING PROTEIN 1-RELATED Panther PTHR21231
Predicted GTPase KOG KOG1533
7-cyano-7-deazaguanine reductase [EC:1.7.1.13] KO K06883
P-loop containing nucleoside triphosphate hydrolases superfamily protein AT AT5G22370

Glyma06g04980

Regulatory protein MLP and related LIM proteins KOG KOG1700
LIM domain PFAM PF00412
LIM DOMAIN Panther PTHR18973
actin filament bundle assembly GO GO:0051017
plasma membrane GO GO:0005886
actin filament binding GO GO:0051015
sequence-specific DNA binding transcription factor activity GO GO:0003700
zinc ion binding PFAM PF00412
LIM DOMAIN Panther PTHR18973
Regulatory protein MLP and related LIM proteins KOG KOG1700
GATA type zinc finger transcription factor family protein AT AT1G10200

Glyma06g04990

Permease family PFAM PF00860
PURINE PERMEASE Panther PTHR11119
Xanthine/uracil transporters KOG KOG1292
transport PFAM PF00860
transport Panther PTHR11119
Xanthine/uracil transporters KOG KOG1292
Xanthine/uracil permease family protein AT AT1G65550

Glyma06g05001

integral to membrane PFAM PF03006
integral to membrane Panther PTHR20855
Predicted membrane proteins, contain hemolysin III domain KOG KOG0748
heptahelical protein 4 AT AT4G37680

Glyma06g05010

AT AT1G58460

Glyma06g05020

Serine carboxypeptidase PFAM PF00450
SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE Panther PTHR11802
Serine carboxypeptidases (lysosomal cathepsin A) KOG KOG1282
Sinapoylglucose--choline O-sinapoyltransferase. EC 2.3.1.91
serine carboxypeptidase-like 19 [EC:3.4.16.- 2.3.1.91] KO K09756
serine-type carboxypeptidase activity PFAM PF00450
serine-type carboxypeptidase activity Panther PTHR11802
Serine carboxypeptidases (lysosomal cathepsin A) KOG KOG1282
serine carboxypeptidase-like 19 AT AT5G09640

Glyma06g05030

Uncharacterised conserved protein UCP031279 AT AT1G10140

Glyma06g05040

Lecithin:cholesterol acyltransferase PFAM PF02450
LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED Panther PTHR11440
Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase KOG KOG2369
phosphatidylcholine-sterol O-acyltransferase activity PFAM PF02450
phosphatidylcholine-sterol O-acyltransferase activity Panther PTHR11440
Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase KOG KOG2369
alpha/beta-Hydrolases superfamily protein AT AT1G27480

Glyma06g05050

U-box domain PFAM PF04564
FAMILY NOT NAMED Panther PTHR22849
ubiquitin-protein ligase activity PFAM PF04564
Zinc-finger of the MIZ type in Nse subunit PFAM PF11789
WDSAM1 PROTEIN Panther PTHR22849
ARM repeat superfamily protein AT AT3G49810

Glyma06g05060

BSD domain PFAM PF03909
BSD domain PFAM PF03909
BSD domain-containing protein AT AT1G10720

Glyma06g05070

FAMILY NOT NAMED Panther PTHR21477
FAMILY NOT NAMED Panther PTHR21477
Carbohydrate-binding protein AT AT1G10150

Glyma06g05081

cell proliferation PFAM PF06404
phytosulfokine 4 precursor AT AT3G49780

Glyma06g05090

AT AT4G10810

Glyma06g05100

Uncharacterized conserved protein (DUF2045) PFAM PF09741
FAMILY NOT NAMED Panther PTHR21477
Uncharacterized conserved protein KOG KOG2465
Uncharacterized conserved protein (DUF2045) PFAM PF09741
FAMILY NOT NAMED Panther PTHR21477
Uncharacterized conserved protein KOG KOG2465
CW7 AT AT1G59520

Glyma06g05111

protein dimerization activity PFAM PF07716
protein dimerization activity PFAM PF00170
basic leucine-zipper 7 AT AT4G37730

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 KOG KOG4205
nucleic acid binding PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 KOG KOG4205
RNA-binding protein Musashi KO K14411
RNA-binding protein 1 AT AT1G58470

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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