SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

← Mutant Description Page

Genes Covered By A Chromosome Alteration FN0122914.10.M3.1

Gene NameGene Annotation
Glyma02g28845
  • Arabidopsis proteins of unknown functionPFAMPF03005
  • Plant protein of unknown function (DUF828)ATAT5G06700
Glyma02g28860
  • Homeobox associated leucine zipperPFAMPF02183
  • HOMEOBOX PROTEINPantherPTHR19418
  • Transcription factor HEX, contains HOX and HALZ domainsKOGKOG0483
  • sequence-specific DNA bindingPFAMPF00046
  • nucleusPFAMPF02183
  • HOMEOBOX PROTEINPantherPTHR19418
  • Transcription factor HEX, contains HOX and HALZ domainsKOGKOG0483
  • homeobox from Arabidopsis thalianaATAT5G06710
Glyma02g28871
Glyma02g28880
Glyma02g28910
Glyma02g28927
  • isoprenoid biosynthetic processPFAMPF00348
  • GERANYLGERANYL PYROPHOSPHATE SYNTHASEPantherPTHR12001
  • geranyl diphosphate synthase 1ATAT2G34630
Glyma02g28944
Glyma02g28962
Glyma02g28980
  • CYSTEINE PROTEASE FAMILY C1-RELATEDPantherPTHR12411
  • cysteine-type peptidase activityPFAMPF00112
  • cysteine-type peptidase activityPantherPTHR12411
  • xylem cysteine peptidase 1ATAT4G35350
Glyma02g29000
Glyma02g29045
  • bindingPFAMPF00139
  • protein phosphorylationPFAMPF00069
  • Protein tyrosine kinasePFAMPF07714
  • SERINE-THREONINE PROTEIN KINASE, PLANT-TYPEPantherPTHR23258
  • Serine/threonine protein kinaseKOGKOG1187
  • Concanavalin A-like lectin protein kinase family proteinATAT5G06740
Glyma02g29090
Glyma02g29100
Glyma02g29116
  • Protein of unknown function (DUF 659)PFAMPF04937
  • protein dimerization activityPFAMPF05699
  • hAT transposon superfamilyATAT4G15020
Glyma02g29133
Glyma02g29150
Glyma02g29160
Glyma02g29170
  • Protein phosphatase 2CPFAMPF00481
  • PROTEIN PHOSPHATASE 2CPantherPTHR13832
  • Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphataseKOGKOG0700
  • catalytic activityPFAMPF00481
  • PROTEIN PHOSPHATASE 2CPantherPTHR13832
  • Protein phosphatase 2C family proteinATAT5G06750
Glyma02g29190
  • RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)PFAMPF00076
  • POLY-A BINDING PROTEIN 2PantherPTHR23365
  • Nucleolar RNA-binding protein NIFKKOGKOG4208
  • nucleic acid bindingPFAMPF00076
  • POLY-A BINDING PROTEIN 2PantherPTHR23365
  • Nucleolar RNA-binding protein NIFKKOGKOG4208
  • RNA-binding (RRM/RBD/RNP motifs) family proteinATAT5G04600
Glyma02g29206
Glyma02g29223
Glyma02g29240
Glyma02g29250
  • NeurochondrinPFAMPF05536
  • FAMILY NOT NAMEDPantherPTHR13109
  • Neurochondrin/leucine-rich protein (Neurochondrin)KOGKOG2611
  • NeurochondrinPFAMPF05536
  • NEUROCHONDRINPantherPTHR13109
  • Neurochondrin/leucine-rich protein (Neurochondrin)KOGKOG2611
  • neurochondrin family proteinATAT4G32050
Glyma02g29260
  • structural molecule activityPFAMPF04755
  • Plastid-lipid associated protein PAP / fibrillin family proteinATAT2G42130
Glyma02g29281
Glyma02g29301
Glyma02g29321
Glyma02g29341
Glyma02g29360
  • Zinc finger C-x8-C-x5-C-x3-H type (and similar)PFAMPF00642
  • RNA-BINDING PROTEIN RELATEDPantherPTHR10288
  • nucleic acid bindingPFAMPF00642
  • RNA bindingPFAMPF00013
  • RNA-BINDING PROTEIN RELATEDPantherPTHR10288
  • KH domain-containing protein / zinc finger (CCCH type) family proteinATAT3G12130
Glyma02g29380
  • Helicase conserved C-terminal domainPFAMPF00271
  • ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATEDPantherPTHR10799
  • Chromatin remodeling complex WSTF-ISWI, small subunitKOGKOG0385
  • hydrolase activityPFAMPF04851
  • ATP bindingPFAMPF00176
  • ATP-dependent helicase activityPFAMPF00270
  • helicase activityPFAMPF00271
  • ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATEDPantherPTHR10799
  • Chromatin remodeling complex WSTF-ISWI, small subunitKOGKOG0385
  • SNF2 domain-containing protein / helicase domain-containing proteinATAT3G12810
  • HSAPFAMPF07529
  • DNA helicaseEC3.6.4.12
  • helicase SWR1 [EC:3.6.4.12]KOK11681
Glyma02g29395
  • nodulin MtN21 /EamA-like transporter family proteinATAT3G28050
Glyma02g29410
Glyma02g29420
  • RIBOSOMAL PROTEIN L30PantherPTHR11449
  • intracellularPantherPTHR11449
  • 60S ribosomal protein L30KOGKOG2988
  • Ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinATAT3G18740
Glyma02g29430
Glyma02g29440
  • Protein of unknown function (DUF620)ATAT3G19540
Glyma02g29450
  • PPR repeatPFAMPF01535
  • PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINPantherPTHR10483
  • PPR repeatPFAMPF01535
  • PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINPantherPTHR10483
  • Pentatricopeptide repeat (PPR) superfamily proteinATAT3G13770
Glyma02g29472
  • UNCHARACTERIZEDPantherPTHR12459
  • Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinATAT5G51150
Glyma02g29495
Glyma02g29518
  • transcription regulator activityPFAMPF00010
  • BASIC HELIX-LOOP-HELIX/LEUCINE ZIPPER TRANSCRIPTION FACTORPantherPTHR10014
  • basic helix-loop-helix (bHLH) DNA-binding superfamily proteinATAT3G57800
Glyma02g29541
Glyma02g29564
Glyma02g29587
  • intracellular signal transductionPFAMPF03311
  • CORNICHONPantherPTHR12290
  • ER vesicle integral membrane protein involved in establishing cell polarity, signaling and protein degradationKOGKOG2729
  • Cornichon family proteinATAT3G12180
Glyma02g29610
  • Protein kinase domainPFAMPF00069
  • SERINE-THREONINE PROTEIN KINASE, PLANT-TYPEPantherPTHR23258
  • Serine/threonine protein kinaseKOGKOG1187
  • Leucine rich repeat N-terminal domainPFAMPF08263
  • protein bindingPFAMPF00560
  • protein phosphorylationPFAMPF07714
  • Protein kinase domainPFAMPF00069
  • SERINE-THREONINE PROTEIN KINASE, PLANT-TYPEPantherPTHR23258
  • Serine/threonine protein kinaseKOGKOG1187
  • Leucine-rich repeat protein kinase family proteinATAT3G57830
Glyma02g29830
  • Helix-loop-helix DNA-binding domainPFAMPF00010
  • transcription regulator activityPFAMPF00010
  • basic helix-loop-helix (bHLH) DNA-binding superfamily proteinATAT2G42280
Glyma02g29850
Glyma02g29900
Glyma02g29910
Glyma02g29943
Glyma02g29976
Glyma02g30010
  • Cytochrome P450PFAMPF00067
  • CYTOCHROME P450PantherPTHR19383
  • Cytochrome P450 CYP2 subfamilyKOGKOG0156
  • Activity=monooxygenase; Pathway=echinatin biosynthesisSoyCycPWY-6325
  • Activity=monooxygenase; Pathway=suberin biosynthesisSoyCycPWY-1121
  • Activity=monooxygenase; Pathway=brassinosteroid biosynthesis IISoyCycPWY-2582
  • Activity=monooxygenase; Pathway=phenylpropanoid biosynthesisSoyCycPWY-361
  • Activity=monooxygenase; Pathway=rosmarinic acid biosynthesis ISoyCycPWY-5048
  • Activity=monooxygenase; Pathway=brassinosteroid biosynthesis ISoyCycPWY-699
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenPFAMPF00067
  • CYTOCHROME P450PantherPTHR19383
  • Cytochrome P450 CYP2 subfamilyKOGKOG0156
  • cytochrome P450, family 93, subfamily D, polypeptide 1ATAT5G06900
Glyma02g30024
Glyma02g30038
  • Plant protein of unknown function (DUF827)ATAT1G66840
Glyma02g30052
Glyma02g30066
Glyma02g30080
Glyma02g30220
  • Basic region leucine zipperPFAMPF07716
  • protein dimerization activityPFAMPF00170
  • Basic region leucine zipper transcription factorKOGKOG3119
  • transcription factor TGAKOK14431
  • bZIP transcription factor family proteinATAT5G06839
Glyma02g30360
  • Protein of unknown function (DUF773)PFAMPF05600
  • FAMILY NOT NAMEDPantherPTHR14894
  • CDK5 activator-binding proteinKOGKOG2607
  • Protein of unknown function (DUF773)PFAMPF05600
  • CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3PantherPTHR14894
  • CDK5 activator-binding proteinKOGKOG2607
  • ATAT5G06830
Glyma02g30370
  • Protein tyrosine kinasePFAMPF07714
  • SERINE-THREONINE PROTEIN KINASE, PLANT-TYPEPantherPTHR23258
  • Serine/threonine protein kinaseKOGKOG1187
  • Leucine rich repeat N-terminal domainPFAMPF08263
  • protein phosphorylationPFAMPF00069
  • Protein tyrosine kinasePFAMPF07714
  • SERINE-THREONINE PROTEIN KINASE, PLANT-TYPEPantherPTHR23258
  • Serine/threonine protein kinaseKOGKOG1187
  • STRUBBELIG-receptor family 2ATAT5G06820
Glyma02g30380
  • G-patch domainPFAMPF01585
  • FAMILY NOT NAMEDPantherPTHR21032
  • Predicted RNA binding protein, contains G-patch and Zn-finger domainsKOGKOG1994
  • nucleic acid bindingPFAMPF01585
  • UNCHARACTERIZEDPantherPTHR21032
  • Predicted RNA binding protein, contains G-patch and Zn-finger domainsKOGKOG1994
  • D111/G-patch domain-containing proteinATAT3G57910
Glyma02g30452
  • membranePFAMPF00892
  • nodulin MtN21 /EamA-like transporter family proteinATAT1G21890
Glyma02g30524






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo