SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Full functionality of the SoyBase site requires that JavaScript be enabled.

Please turn on JavaScript in your browser's preferences. If you are using a selective JavaScript blocking plugin such as NoScript, add
www.soybase.org to the exclude filter.

← Mutant Description Page

Genes Covered By A Chromosome Alteration FN0120105.03.01.M4.1

Gene Name

Gene Annotation

methyl-CPG-binding domain protein 13 AT AT5G52230

Ctf8 PFAM PF09696
Uncharacterized conserved protein KOG KOG4487
Ctf8 PFAM PF09696
Uncharacterized conserved protein KOG KOG4487
chromosome transmission fidelity protein 8 KO K11270
AT AT5G52220

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING Panther PTHR22765
Zinc finger, C3HC4 type (RING finger) PFAM PF00097
RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING Panther PTHR22765
RING/U-box superfamily protein AT AT3G05200

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
RING FINGER PROTEIN 11 (SID 1669) (NEDD4 WW DOMAIN-BINDING PROTEIN 2). Panther PTHR22764
Zinc finger, C3HC4 type (RING finger) PFAM PF00097
RING FINGER PROTEIN 11 (SID 1669) (NEDD4 WW DOMAIN-BINDING PROTEIN 2). Panther PTHR22764
carbon/nitrogen insensitive 1 AT AT5G27420

hydrolase activity, acting on ester bonds PFAM PF04827
AT AT2G13770

protein binding PFAM PF00646
F-box/RNI-like superfamily protein AT AT1G69630

protein binding PFAM PF00646
F-box/RNI-like superfamily protein AT AT5G22720

F-box domain PFAM PF00646
protein binding PFAM PF00646
F-box/RNI-like superfamily protein AT AT5G22720

protein binding PFAM PF00646
F-box/RNI-like superfamily protein AT AT1G69630

protein binding PFAM PF00646
F-box/RNI-like superfamily protein AT AT1G69630

protein binding PFAM PF00646
F-box/RNI-like superfamily protein AT AT1G69630

F-box/RNI-like superfamily protein AT AT4G22280

RNA binding PFAM PF05641
agenet domain-containing protein AT AT1G09320

F-box domain PFAM PF00646
protein binding PFAM PF00646
F-box/RNI-like superfamily protein AT AT5G22720

gb def: Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F17P19 (AT5g52200/F17P Panther PTHR12398:SF5
PROTEIN PHOSPHATASE INHIBITOR Panther PTHR12398
regulation of phosphoprotein phosphatase activity PFAM PF04979
PROTEIN PHOSPHATASE INHIBITOR Panther PTHR12398
phosphoprotein phosphatase inhibitors AT AT5G52200
gb def: Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F17P19 (AT5g52200/F17P Panther PTHR12398:SF5

Cytochrome P450 PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156

Activity=oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen; Pathway=dhurrin biosynthesis

SoyCyc

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156
cytochrome P450, family 71, subfamily A, polypeptide 26 AT AT3G48270

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
cytochrome P450, family 71, subfamily A, polypeptide 26 AT AT3G48270

KINESIN HEAVY CHAIN Panther PTHR16012
microtubule motor activity PFAM PF00225
KINESIN HEAVY CHAIN Panther PTHR16012
Kinesin-like protein KOG KOG4280
Di-glucose binding protein with Kinesin motor domain AT AT1G72250

Cytochrome P450 PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156

Activity=oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen; Pathway=dhurrin biosynthesis

SoyCyc

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156
cytochrome P450, family 71, subfamily A, polypeptide 26 AT AT3G48270

nucleic acid binding PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
RNA-binding (RRM/RBD/RNP motifs) family protein AT AT4G09040

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156
cytochrome P450, family 71, subfamily A, polypeptide 26 AT AT3G48270

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
cytochrome P450, family 71, subfamily A, polypeptide 26 AT AT3G48270

Cytochrome P450 PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156

Activity=oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen; Pathway=luteolin biosynthesis

SoyCyc

Activity=oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen; Pathway=flavonol biosynthesis

SoyCyc

Activity=oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen; Pathway=leucodelphinidin biosynthesis

SoyCyc

Activity=oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen; Pathway=leucopelargonidin and leucocyanidin biosynthesis

SoyCyc

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP2 subfamily KOG KOG0156
cytochrome P450, family 71, subfamily A, polypeptide 26 AT AT3G48270

SHORT-CHAIN DEHYDROGENASES/REDUCTASE Panther PTHR19410
Mitochondrial/plastidial beta-ketoacyl-ACP reductase KOG KOG1200
oxidoreductase activity PFAM PF00106
SHORT-CHAIN DEHYDROGENASES/REDUCTASE Panther PTHR19410
Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase KOG KOG1199
NAD(P)-binding Rossmann-fold superfamily protein AT AT1G24360

HSF-type DNA-binding PFAM PF00447
HEAT SHOCK TRANSCRIPTION FACTOR Panther PTHR10015
sequence-specific DNA binding PFAM PF00447
HEAT SHOCK TRANSCRIPTION FACTOR Panther PTHR10015
heat shock transcription factor B2A AT AT5G62020

Protein of unknown function (DUF2930) PFAM PF11152
cofactor assembly of complex C AT AT1G59840

Phosphatidylethanolamine-binding protein PFAM PF01161
PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN Panther PTHR11362
Phosphatidylethanolamine binding protein KOG KOG3346
Phosphatidylethanolamine-binding protein PFAM PF01161
PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN Panther PTHR11362
Phosphatidylethanolamine binding protein KOG KOG3346
PEBP (phosphatidylethanolamine-binding protein) family protein AT AT5G03840

Zinc finger, C3HC4 type (RING finger) PFAM PF00097
ANKYRIN REPEAT-CONTAINING Panther PTHR18958
Myotrophin and similar proteins KOG KOG4214
protein binding PFAM PF00023
ANKYRIN REPEAT-CONTAINING Panther PTHR18958
26S proteasome regulatory complex, subunit PSMD10 KOG KOG4412
XB3 ortholog 3 in Arabidopsis thaliana AT AT5G07270

START domain PFAM PF01852
HOMEOBOX PROTEIN Panther PTHR19418
sequence-specific DNA binding PFAM PF00046
START domain PFAM PF01852
HOMEOBOX PROTEIN Panther PTHR19418
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein AT AT4G00730

Rhomboid family PFAM PF01694
RHOMBOID-RELATED Panther PTHR22936
Rhomboid family proteins KOG KOG2289
serine-type endopeptidase activity PFAM PF01694
serine-type endopeptidase activity Panther PTHR22936
Rhomboid family proteins KOG KOG2289
RHOMBOID-like 2 AT AT1G63120

IQ calmodulin-binding motif PFAM PF00612
protein binding PFAM PF00612
MENINGIOMA EXPRESSED ANTIGEN Panther PTHR13140:SF12
IQ-domain 24 AT AT5G07240

Protease inhibitor/seed storage/LTP family PFAM PF00234
Protease inhibitor/seed storage/LTP family PFAM PF00234
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein AT AT5G52160

protein dimerization activity PFAM PF05699
BED FINGER-RELATED Panther PTHR23272
Tam3-transposase (Ac family) KOG KOG1121
BED zinc finger ;hAT family dimerisation domain AT AT3G42170

Methyltransferase domain PFAM PF08241
methyltransferase activity PFAM PF03141
Methyltransferase domain PFAM PF08241
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein AT AT2G45750

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
cytochrome P450, family 716, subfamily A, polypeptide 2 AT AT5G36140

thylakoid PFAM PF00223
Photosystem I, PsaA/PsaB protein AT ATCG00350

HEXOKINASE Panther PTHR19443
phosphotransferase activity, alcohol group as acceptor PFAM PF00349
phosphotransferase activity, alcohol group as acceptor PFAM PF03727
phosphotransferase activity, alcohol group as acceptor Panther PTHR19443
hexokinase 3 AT AT1G47840

thylakoid PFAM PF00223
Photosystem I, PsaA/PsaB protein AT ATCG00350

oxidoreductase activity PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein AT AT1G06620

2OG-Fe(II) oxygenase superfamily PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
oxidoreductase activity PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein AT AT1G06620

2OG-Fe(II) oxygenase superfamily PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
oxidoreductase activity PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein AT AT1G06620

oxidoreductase activity PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein AT AT1G06620

FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein AT AT1G06620

2OG-Fe(II) oxygenase superfamily PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
oxidoreductase activity PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein AT AT1G06620

FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
oxidoreductase activity PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein AT AT2G30840

2OG-Fe(II) oxygenase superfamily PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
oxidoreductase activity PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein AT AT1G06620

AMINO ACID TRANSPORTER Panther PTHR22950
Transmembrane amino acid transporter protein PFAM PF01490
AMINO ACID TRANSPORTER Panther PTHR22950
Transmembrane amino acid transporter family protein AT AT2G39130

polygalacturonase activity PFAM PF00295
nuclease activity PFAM PF04231
Pectin lyase-like superfamily protein AT AT5G14650

Leucine Rich Repeat PFAM PF00560
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Leucine-rich repeat protein KOG KOG0472
Leucine rich repeat N-terminal domain PFAM PF08263
protein binding PFAM PF00560
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Leucine-rich repeat protein KOG KOG0472
receptor like protein 7 AT AT1G47890

F-box domain PFAM PF00646
phloem protein 2-A13 AT AT3G61060

F-BOX AND WD40 DOMAIN PROTEIN 7 (FBW7) Panther PTHR22844:SF11
F-box family protein AT AT4G00755

SEUSS-like 2 AT AT5G62090

SEUSS-like 2 AT AT5G62090

SEUSS-like 2 AT AT5G62090

SEUSS-like 2 AT AT5G62090

Trehalose-phosphatase PFAM PF02358
TREHALOSE-6-PHOSPHATE SYNTHASE Panther PTHR10788
trehalose biosynthetic process PFAM PF02358
TREHALOSE-6-PHOSPHATE SYNTHASE Panther PTHR10788
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein AT AT5G65140

Protein of unknown function (DUF1446) PFAM PF07287
Protein of unknown function (DUF1446) PFAM PF07287
AT AT1G01770

BAG domain PFAM PF02179
BCL2-associated athanogene-like proteins and related BAG family chaperone regulators KOG KOG4361
protein binding PFAM PF00240
apoptosis PFAM PF02179
BCL2-associated athanogene-like proteins and related BAG family chaperone regulators KOG KOG4361
BCL-2-associated athanogene 1 AT AT5G52060

BAG domain PFAM PF02179
BCL2-associated athanogene-like proteins and related BAG family chaperone regulators KOG KOG4361
protein binding PFAM PF00240
apoptosis PFAM PF02179
BCL2-associated athanogene-like proteins and related BAG family chaperone regulators KOG KOG4361
BCL-2-associated athanogene 1 AT AT5G52060

MatE PFAM PF01554
MULTIDRUG RESISTANCE PUMP Panther PTHR11206
Uncharacterized membrane protein, predicted efflux pump KOG KOG1347
antiporter activity PFAM PF01554
antiporter activity Panther PTHR11206
Uncharacterized membrane protein, predicted efflux pump KOG KOG1347
MATE efflux family protein AT AT4G23030

two-component response regulator activity PFAM PF00072
Myb-like DNA-binding domain PFAM PF00249
TWO-COMPONENT SYSTEM SENSOR HISTIDINE KINASE/RESPONSE REGULATOR (INTESTINAL BACTERIA - BACTEROIDES THETAIOTAOMICRON) Panther PTHR23283:SF21
response regulator 2 AT AT4G16110

AP2 domain PFAM PF00847
sequence-specific DNA binding transcription factor activity PFAM PF00847
C-repeat-binding factor 4 AT AT5G51990

Per1-like PFAM PF04080
PER1-RELATED Panther PTHR13148
Predicted membrane protein KOG KOG2970
Per1-like family protein AT AT5G62130

ATPase activity, coupled to transmembrane movement of substances PFAM PF00664
ATPase activity PFAM PF00005
ATP-BINDING CASSETTE TRANSPORTER Panther PTHR19242
Peptide exporter, ABC superfamily KOG KOG0058
non-intrinsic ABC protein 8 AT AT4G25450

AT AT5G62140

PIF1 helicase PFAM PF05970
HELICASE-RELATED Panther PTHR10492
PIF1 helicase AT AT3G51700

tRNA processing PFAM PF03054
tRNA processing Panther PTHR11933
transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases AT AT1G51310

WD domain, G-beta repeat PFAM PF00400
F-BOX AND WD40 DOMAIN PROTEIN Panther PTHR22844
Cdc4 and related F-box and WD-40 proteins KOG KOG0274
nucleic acid binding PFAM PF00642
WD domain, G-beta repeat PFAM PF00400
F-BOX AND WD40 DOMAIN PROTEIN Panther PTHR22844
Cdc4 and related F-box and WD-40 proteins KOG KOG0274
zinc finger WD40 repeat protein 1 AT AT4G25440

Zinc-binding dehydrogenase PFAM PF00107
ALCOHOL DEHYDROGENASE RELATED Panther PTHR11695
Sorbitol dehydrogenase KOG KOG0024
L-iditol 2-dehydrogenase. EC 1.1.1.14
E1.1.1.14, gutB; L-iditol 2-dehydrogenase [EC:1.1.1.14 ] [COG:COG1063 ] [GO:0003939 ] KO K00008
oxidation-reduction process GO GO:0055114
oxidoreductase activity GO GO:0016491
zinc ion binding GO GO:0008270
Activity=L-iditol 2-dehydrogenase; Pathway=sorbitol degradation I SoyCyc PWY-4101
Activity=L-iditol 2-dehydrogenase; Pathway=sorbitol degradation SoyCyc PWY-4101
oxidoreductase activity PFAM PF08240
oxidoreductase activity PFAM PF00107
oxidoreductase activity Panther PTHR11695
Sorbitol dehydrogenase KOG KOG0024
L-iditol 2-dehydrogenase EC 1.1.1.14
L-iditol 2-dehydrogenase [EC:1.1.1.14] KO K00008
GroES-like zinc-binding alcohol dehydrogenase family protein AT AT5G51970

LysM domain PFAM PF01476
cell wall macromolecule catabolic process PFAM PF01476
peptidoglycan-binding LysM domain-containing protein AT AT5G62150

LysM domain PFAM PF01476
cell wall macromolecule catabolic process PFAM PF01476
peptidoglycan-binding LysM domain-containing protein AT AT3G52790

MOLYBDOPTERIN COFACTOR SULFURASE (MOSC) Panther PTHR14237
metabolic process PFAM PF00266
MOLYBDOPTERIN COFACTOR SULFURASE (MOSC) Panther PTHR14237
Molybdenum cofactor sulfurase KOG KOG2142
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein AT AT5G66950

Hydroxymethylglutaryl-coenzyme A synthase C terminal PFAM PF08540
HYDROXYMETHYLGLUTARYL-COA SYNTHASE Panther PTHR11877
Hydroxymethylglutaryl-CoA synthase KOG KOG1393
Activity=hydroxymethylglutaryl-CoA synthase; Pathway=mevalonate pathway I SoyCyc PWY-922
Activity=hydroxymethylglutaryl-CoA synthase; Pathway=superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) SoyCyc PWY-5910
Activity=hydroxymethylglutaryl-CoA synthase; Pathway=mevalonate pathway SoyCyc PWY-922
Activity=hydroxymethylglutaryl-CoA synthase; Pathway=superpathway of geranylgeranyldiphosphate biosynthesis I via mevalonate SoyCyc PWY-5910
hydroxymethylglutaryl-CoA synthase activity PFAM PF01154
hydroxymethylglutaryl-CoA synthase activity PFAM PF08540
HYDROXYMETHYLGLUTARYL-COA SYNTHASE Panther PTHR11877
Hydroxymethylglutaryl-CoA synthase KOG KOG1393
hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase AT AT4G11820

Peroxidase PFAM PF00141
Peroxidase. EC 1.11.1.7
E1.11.1.7; peroxidase [EC:1.11.1.7 ] [GO:0004601 ] KO K00430
peroxidase activity PFAM PF00141
peroxidase EC 1.11.1.7
peroxidase [EC:1.11.1.7] KO K00430
Peroxidase superfamily protein AT AT5G51890

AT AT5G62170

pfkB family carbohydrate kinase PFAM PF00294
SUGAR KINASE RELATED Panther PTHR10584
Ribokinase KOG KOG2855
Fructokinase. EC 2.7.1.4
E2.7.1.4, scrK; fructokinase [EC:2.7.1.4 ] [COG:COG0524 ] [GO:0008865 ] KO K00847
Activity=fructokinase; Pathway=sucrose degradation VI (anaerobic) SoyCyc PWY-3801
Activity=fructokinase; Pathway=sucrose degradation III SoyCyc PWY-621
Activity=fructokinase; Pathway=sucrose degradation III SoyCyc PWY-621
Activity=fructokinase; Pathway=sucrose degradation I SoyCyc SUCUTIL-PWY
Activity=fructokinase; Pathway=sucrose degradation to ethanol and lactate anaerobic SoyCyc PWY-3801
Activity=fructokinase; Pathway=homolactic fermentation SoyCyc ANAEROFRUCAT-PWY
pfkB family carbohydrate kinase PFAM PF00294
SUGAR KINASE RELATED Panther PTHR10584
Ribokinase KOG KOG2855
fructokinase EC 2.7.1.4
fructokinase [EC:2.7.1.4] KO K00847
pfkB-like carbohydrate kinase family protein AT AT5G51830

sequence-specific DNA binding PFAM PF00319
nucleus PFAM PF01486
MADS BOX PROTEIN Panther PTHR11945
MADS box transcription factor KOG KOG0014
AGAMOUS-like 6 AT AT2G45650

2OG-Fe(II) oxygenase superfamily PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
Gibberellin-44 dioxygenase. EC 1.14.11.12
E1.14.11.12; gibberellin 20-oxidase [EC:1.14.11.12 ] [GO:0045544 ] KO K05282
Activity=gibberellin_20-oxidase; Pathway=gibberellin biosynthesis III (early C-13 hydroxylation) SoyCyc PWY-5035
Activity=gibberellin_20-oxidase; Pathway=flavonoid biosynthesis SoyCyc PWY1F-FLAVSYN
Activity=gibberellin_20-oxidase; Pathway=leucodelphinidin biosynthesis SoyCyc PWY-5152
Activity=gibberellin_20-oxidase; Pathway=leucopelargonidin and leucocyanidin biosynthesis SoyCyc PWY1F-823
Activity=Gibberellin_20-oxidase; Pathway=Gibberellin biosynthesis III early C-13 hydroxylation SoyCyc PWY-5035
oxidoreductase activity PFAM PF03171
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY Panther PTHR10209
Iron/ascorbate family oxidoreductases KOG KOG0143
gibberellin-44 dioxygenase EC 1.14.11.12
gibberellin 20-oxidase [EC:1.14.11.12] KO K05282
gibberellin 20 oxidase 2 AT AT5G51810

alpha/beta hydrolase fold PFAM PF07859
MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Panther PTHR23024
Arylacetamide deacetylase KOG KOG1515
hydrolase activity PFAM PF07859
MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Panther PTHR23024
Arylacetamide deacetylase KOG KOG1515
carboxyesterase 20 AT AT5G62180

hydrolase activity PFAM PF07859
MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Panther PTHR23024
Arylacetamide deacetylase KOG KOG1515
carboxyesterase 20 AT AT5G62180

microtubule motor activity PFAM PF00225
KINESIN HEAVY CHAIN Panther PTHR16012
phragmoplast-associated kinesin-related protein, putative AT AT3G23670

MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Panther PTHR23024
MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Panther PTHR23024
carboxyesterase 20 AT AT5G62180

CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED Panther PTHR22982
Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain KOG KOG4282
protein phosphorylation PFAM PF00069
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED Panther PTHR22982
Protein kinase superfamily protein AT AT5G51800

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Protein kinase superfamily protein AT AT1G52540

Helix-loop-helix DNA-binding domain PFAM PF00010
transcription regulator activity PFAM PF00010
basic helix-loop-helix (bHLH) DNA-binding superfamily protein AT AT4G25410

Helix-loop-helix DNA-binding domain PFAM PF00010
ACHAETE-SCUTE HOMOLOG Panther PTHR13935:SF14
transcription regulator activity PFAM PF00010
ACHAETE-SCUTE HOMOLOG Panther PTHR13935:SF14
basic helix-loop-helix (bHLH) DNA-binding superfamily protein AT AT5G51780

Protein kinase domain PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
protein phosphorylation PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Protein kinase superfamily protein AT AT4G25390

Glycosyl transferase family 64 domain PFAM PF09258
EXOSTOSIN (HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED Panther PTHR11062
intrinsic to endoplasmic reticulum membrane PFAM PF09258
EXOSTOSIN (HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED Panther PTHR11062
Nucleotide-diphospho-sugar transferases superfamily protein AT AT3G55830

PA domain PFAM PF02225
SUBTILISIN/KEXIN-RELATED SERINE PROTEASE Panther PTHR10795
identical protein binding PFAM PF05922
serine-type endopeptidase activity PFAM PF00082
PA domain PFAM PF02225
SUBTILISIN/KEXIN-RELATED SERINE PROTEASE Panther PTHR10795
subtilase 1.3 AT AT5G51750

Legume lectin domain PFAM PF00139
binding PFAM PF00139
Concanavalin A-like lectin protein kinase family protein AT AT5G10530

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Domain of unknown function DUF26 PFAM PF01657
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
cysteine-rich RLK (RECEPTOR-like protein kinase) 25 AT AT4G05200

Retroviral aspartyl protease PFAM PF00077

CALCIUM-DEPENDENT PROTEIN KINASE Panther PTHR22982:SF13
CALCIUM-DEPENDENT PROTEIN KINASE Panther PTHR22982:SF13
calmodulin-like domain protein kinase 9 AT AT5G23580

Domain of unknown function DUF26 PFAM PF01657
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
cysteine-rich RLK (RECEPTOR-like protein kinase) 10 AT AT4G23180

Domain of unknown function DUF26 PFAM PF01657
protein phosphorylation PFAM PF00069
protein phosphorylation PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
cysteine-rich RLK (RECEPTOR-like protein kinase) 23 AT AT4G23310

ALWAYS EARLY Panther PTHR21689:SF1
DIRP ;Myb-like DNA-binding domain AT AT5G27610

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Domain of unknown function DUF26 PFAM PF01657
protein phosphorylation PFAM PF00069
protein phosphorylation PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
cysteine-rich RLK (RECEPTOR-like protein kinase) 10 AT AT4G23180
cysteine-rich RLK (RECEPTOR-like protein kinase) 32 AT AT4G11480

Peptidase family M48 PFAM PF01435
FAMILY NOT NAMED Panther PTHR22726
metalloendopeptidase activity PFAM PF01435
OMA1 HOMOLOG, ZINC METALLOPEPTIDASE Panther PTHR22726
Peptidase family M48 family protein AT AT5G51740

Embryo-specific protein 3, (ATS3) PFAM PF06232
Embryo-specific protein 3, (ATS3) PFAM PF06232
Embryo-specific protein 3, (ATS3) AT AT5G62200

Ribosomal protein S11 PFAM PF00411
40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 Panther PTHR11759
40S ribosomal protein S14 KOG KOG0407
intracellular PFAM PF00411
intracellular Panther PTHR11759
40S ribosomal protein S14 KOG KOG0407
Ribosomal L18p/L5e family protein AT AT1G31817

Iron-binding zinc finger CDGSH type PFAM PF09360
FAMILY NOT NAMED Panther PTHR13680
CDGSH-type Zn-finger containing protein KOG KOG3461
intracellular membrane-bounded organelle PFAM PF09360
FAMILY NOT NAMED Panther PTHR13680
CDGSH-type Zn-finger containing protein KOG KOG3461
2 iron, 2 sulfur cluster binding AT AT5G51720

Sodium/hydrogen exchanger family PFAM PF00999
FAMILY NOT NAMED Panther PTHR16254
Predicted K+/H+-antiporter KOG KOG1650
transmembrane transport GO GO:0055085
potassium:hydrogen antiporter activity GO GO:0015386
potassium ion transmembrane transporter activity GO GO:0015079
potassium ion transport GO GO:0006813
cation transport GO GO:0006812
cation transport PFAM PF00999
POTASSIUM/PROTON ANTIPORTER-RELATED Panther PTHR16254
Predicted K+/H+-antiporter KOG KOG1650
K+ efflux antiporter 5 AT AT5G51710

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine rich repeat N-terminal domain PFAM PF08263
protein binding PFAM PF00560
Protein tyrosine kinase PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
ERECTA-like 1 AT AT5G62230

Cell cycle regulated microtubule associated protein PFAM PF12214
Cell cycle regulated microtubule associated protein AT AT4G22860

HIT zinc finger PFAM PF04438
FAMILY NOT NAMED Panther PTHR13483
HIT zinc finger PFAM PF04438
UNCHARACTERIZED Panther PTHR13483
HIT-type Zinc finger family protein AT AT1G04945

Aminotransferase class I and II PFAM PF00155
SUBGROUP I AMINOTRANSFERASE RELATED Panther PTHR11751
1-aminocyclopropane-1-carboxylate synthase, and related proteins KOG KOG0256
Activity=1-aminocyclopropane-1-carboxylate synthase; Pathway=methionine salvage pathway SoyCyc PWY-4361-ARA
Activity=1-aminocyclopropane-1-carboxylate synthase; Pathway=ethylene biosynthesis I (plants) SoyCyc ETHYL-PWY
Activity=1-aminocyclopropane-1-carboxylate synthase; Pathway=ethylene biosynthesis from methionine SoyCyc ETHYL-PWY
transferase activity, transferring nitrogenous groups PFAM PF00155
SUBGROUP I AMINOTRANSFERASE RELATED Panther PTHR11751
1-aminocyclopropane-1-carboxylate synthase, and related proteins KOG KOG0256
aminotransferase KO K14270
1-amino-cyclopropane-1-carboxylate synthase 12 AT AT5G51690

GLUTAMATE DEHYDROGENASE Panther PTHR11606
cellular amino acid metabolic process PFAM PF00208
GLUTAMATE DEHYDROGENASE Panther PTHR11606
Amino acid dehydrogenase family protein AT AT1G51720

Protein of unknown function (DUF668) PFAM PF05003
Domain of unknown function (DUF3475) PFAM PF11961
Protein of unknown function (DUF668) PFAM PF05003
Protein of unknown function (DUF668) AT AT5G51670

CPSF A subunit region PFAM PF03178
DNA REPAIR/RNA PROCESSING CPSF FAMILY Panther PTHR10644
mRNA cleavage and polyadenylation factor II complex, subunit CFT1 (CPSF subunit) KOG KOG1896
nucleic acid binding PFAM PF03178
DNA REPAIR/RNA PROCESSING CPSF FAMILY Panther PTHR10644
mRNA cleavage and polyadenylation factor II complex, subunit CFT1 (CPSF subunit) KOG KOG1896
cleavage and polyadenylation specificity factor subunit 1 KO K14401
cleavage and polyadenylation specificity factor 160 AT AT5G51660

Clp amino terminal domain PFAM PF02861
ATP-DEPENDENT CLP PROTEASE Panther PTHR11638
protein metabolic process PFAM PF02861
ATP-DEPENDENT CLP PROTEASE Panther PTHR11638
Double Clp-N motif protein AT AT4G25370

Clp amino terminal domain PFAM PF02861
ATP-DEPENDENT CLP PROTEASE Panther PTHR11638
protein metabolic process PFAM PF02861
ATP-DEPENDENT CLP PROTEASE Panther PTHR11638
Double Clp-N motif protein AT AT4G25370

DNA binding PFAM PF02892
protein dimerization activity PFAM PF05699
BED FINGER-RELATED Panther PTHR23272
Tam3-transposase (Ac family) KOG KOG1121
BED zinc finger ;hAT family dimerisation domain AT AT3G42170

Microtubule associated protein (MAP65/ASE1 family) PFAM PF03999
PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED Panther PTHR19321
Microtubule-associated protein essential for anaphase spindle elongation KOG KOG4302
Microtubule associated protein (MAP65/ASE1 family) PFAM PF03999
PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED Panther PTHR19321
Microtubule-associated protein essential for anaphase spindle elongation KOG KOG4302
Microtubule associated protein (MAP65/ASE1) family protein AT AT5G51600

Domain of unknown function (DUF296) PFAM PF03479
Domain of unknown function (DUF296) PFAM PF03479
AT hook motif DNA-binding family protein AT AT5G62260

AT AT1G62935

Enolase, C-terminal TIM barrel domain PFAM PF00113
ENOLASE Panther PTHR11902
Enolase KOG KOG2670
Phosphopyruvate hydratase. EC 4.2.1.11
E4.2.1.11, eno; enolase [EC:4.2.1.11 ] [COG:COG0148 ] [GO:0004634 ] KO K01689
response to abscisic acid stimulus GO GO:0009737
chloroplast GO GO:0009507
apoplast GO GO:0048046
membrane GO GO:0016020
response to salt stress GO GO:0009651
plasma membrane GO GO:0005886
copper ion binding GO GO:0005507
response to cadmium ion GO GO:0046686
mitochondrial envelope GO GO:0005740
mitochondrion GO GO:0005739
response to light stimulus GO GO:0009416
response to cold GO GO:0009409
cytoplasm GO GO:0005737
nucleus GO GO:0005634
DNA binding GO GO:0003677
phosphopyruvate hydratase activity GO GO:0004634
Activity=phosphopyruvate hydratase; Pathway=gluconeogenesis I SoyCyc GLUCONEO-PWY
Activity=phosphopyruvate hydratase; Pathway=sucrose degradation VI (anaerobic) SoyCyc PWY-3801
Activity=phosphopyruvate hydratase; Pathway=superpathway of glycolysis and Entner-Doudoroff SoyCyc GLYCOLYSIS-E-D
Activity=phosphopyruvate hydratase; Pathway=superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle SoyCyc PWY-5464
Activity=phosphopyruvate hydratase; Pathway=Rubisco shunt SoyCyc PWY-5723
Activity=phosphopyruvate hydratase; Pathway=glycolysis I SoyCyc GLYCOLYSIS
Activity=phosphopyruvate hydratase; Pathway=glycolysis IV (plant cytosol) SoyCyc PWY-1042
Activity=phosphopyruvate hydratase; Pathway=glycolysis II (from fructose-6P) SoyCyc PWY-5484
Activity=phosphopyruvate hydratase; Pathway=superpathway of cytosolic glycolysis plants, pyruvate dehydrogenase and TCA cycle SoyCyc PWY-5464
Activity=phosphopyruvate hydratase; Pathway=Rubisco shunt SoyCyc PWY-5723
Activity=phosphopyruvate hydratase; Pathway=sucrose degradation to ethanol and lactate anaerobic SoyCyc PWY-3801
Activity=phosphopyruvate hydratase; Pathway=Glycolysis I SoyCyc GLYCOLYSIS
Activity=phosphopyruvate hydratase; Pathway=superpathway of glycolysis and Entner-Doudoroff SoyCyc GLYCOLYSIS-E-D
Activity=phosphopyruvate hydratase; Pathway=Gluconeogenesis SoyCyc GLUCONEO-PWY
Activity=phosphopyruvate hydratase; Pathway=Glycolysis III SoyCyc ANAGLYCOLYSIS-PWY
Activity=phosphopyruvate hydratase; Pathway=Glycolysis IV plant cytosol SoyCyc PWY-1042
phosphopyruvate hydratase complex PFAM PF03952
phosphopyruvate hydratase complex PFAM PF00113
PFAM PF07476
ENOLASE Panther PTHR11902
Enolase KOG KOG2670
phosphopyruvate hydratase EC 4.2.1.11
enolase [EC:4.2.1.11] KO K01689
Enolase AT AT2G36530

Protein of unknown function DUF89 PFAM PF01937
PANTOTHENATE KINASE Panther PTHR12280
Uncharacterized conserved protein KOG KOG4584
cellular_component GO GO:0005575
molecular_function GO GO:0003674
pantothenate kinase activity GO GO:0004594
Protein of unknown function DUF89 PFAM PF01937
PANTOTHENATE KINASE Panther PTHR12280
Uncharacterized conserved protein KOG KOG4584
Uncharacterised conserved protein (UCP030210) AT AT4G35360

AT AT1G62870

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT5G66520

SPFH domain / Band 7 family PFAM PF01145
STOMATIN-RELATED Panther PTHR10264
Prohibitins and stomatins of the PID superfamily KOG KOG2620
vacuole GO GO:0005773
vacuolar membrane GO GO:0005774
plasma membrane GO GO:0005886
SPFH domain / Band 7 family PFAM PF01145
membrane Panther PTHR10264
Prohibitins and stomatins of the PID superfamily KOG KOG2620
SPFH/Band 7/PHB domain-containing membrane-associated protein family AT AT5G51570

Protein of unknown function (DUF1442) PFAM PF07279
Protein of unknown function (DUF1442) PFAM PF07279
Protein of unknown function (DUF1442) AT AT5G62280

Protein kinase domain PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine rich repeat N-terminal domain PFAM PF08263
Protein kinase domain PFAM PF00069
protein phosphorylation PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine-rich repeat protein kinase family protein AT AT5G51560

Chlorophyll A-B binding protein PFAM PF00504
CHLOROPHYLL A/B BINDING PROTEIN Panther PTHR21649
light-harvesting complex II chlorophyll a/b binding protein 5 KO K08916
chloroplast GO GO:0009507
plastoglobule GO GO:0010287
membrane GO GO:0016020
chloroplast thylakoid membrane GO GO:0009535
photosystem II antenna complex GO GO:0009783
light-harvesting complex GO GO:0030076
photosynthesis GO GO:0015979
chlorophyll binding GO GO:0016168
chloroplast stromal thylakoid GO GO:0009533
PSII associated light-harvesting complex II GO GO:0009517
response to far red light GO GO:0010218
response to red light GO GO:0010114
response to blue light GO GO:0009637
nonphotochemical quenching GO GO:0010196
thylakoid GO GO:0009579
Chlorophyll A-B binding protein PFAM PF00504
photosynthesis, light harvesting Panther PTHR21649
light-harvesting complex II chlorophyll a/b binding protein 5 KO K08916
light harvesting complex of photosystem II 5 AT AT4G10340

glycine-rich protein AT AT4G10330

Arabidopsis thaliana protein of unknown function (DUF794) PFAM PF05634
TRANSLATION FACTOR SUI1 Panther PTHR10388
Arabidopsis thaliana protein of unknown function (DUF794) PFAM PF05634
TRANSLATION FACTOR SUI1 Panther PTHR10388
Arabidopsis thaliana protein of unknown function (DUF794) AT AT1G64810

Protein of unknown function (DUF861) PFAM PF05899
Protein of unknown function (DUF861) PFAM PF05899
PFAM PF06249
Cupin domain PFAM PF07883
RmlC-like cupins superfamily protein AT AT4G10280

C-terminal, D2-small domain, of ClpB protein PFAM PF10431
HSL AND CLP PROTEASE Panther PTHR11262
Putative ATP-dependent Clp-type protease (AAA+ ATPase superfamily) KOG KOG0745
ATP binding PFAM PF07724
ATPase family associated with various cellular activities (AAA) PFAM PF07728
ATP binding PFAM PF00004
C-terminal, D2-small domain, of ClpB protein PFAM PF10431
HSL AND CLP PROTEASE Panther PTHR11262
Putative ATP-dependent Clp-type protease (AAA+ ATPase superfamily) KOG KOG0745
ATP-dependent Clp protease AT AT1G33360

DnaJ domain PFAM PF00226
DNAJ/HSP40 Panther PTHR11821
heat shock protein binding PFAM PF00226
Domain of unknown function (DUF3444) PFAM PF11926
DNAJ/HSP40 Panther PTHR11821
DNAJ heat shock N-terminal domain-containing protein AT AT2G25560

Trypsin and protease inhibitor PFAM PF00197
endopeptidase inhibitor activity PFAM PF00197
Kunitz family trypsin and protease inhibitor protein AT AT1G17860

UNCHARACTERIZED Panther PTHR16052
C-CAP/cofactor C-like domain-containing protein AT AT2G42230

plastid movement impaired1 AT AT1G42550

endopeptidase inhibitor activity PFAM PF00197

Ribosomal Proteins L2, C-terminal domain PFAM PF03947
RIBOSOMAL PROTEIN L2 Panther PTHR13691
intracellular PFAM PF03947
intracellular Panther PTHR13691
Ribosomal protein L2 family AT AT2G44065

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
ATP binding;nucleic acid binding;helicases AT AT1G12700

AN1-like Zinc finger PFAM PF01428
PRK1-ASSOCIATED ZINC FINGER PROTEIN Panther PTHR10634
zinc ion binding PFAM PF01754
zinc ion binding PFAM PF01428
PRK1-ASSOCIATED ZINC FINGER PROTEIN Panther PTHR10634
Predicted Zn-finger protein KOG KOG3173
A20/AN1-like zinc finger family protein AT AT4G12040

ANTH domain PFAM PF07651
CLATHRIN ASSEMBLY PROTEIN Panther PTHR22951
Clathrin assembly protein AP180 and related proteins, contain ENTH domain KOG KOG0251
phospholipid binding PFAM PF07651
CLATHRIN ASSEMBLY PROTEIN Panther PTHR22951
Clathrin assembly protein AP180 and related proteins, contain ENTH domain KOG KOG0251
ENTH/ANTH/VHS superfamily protein AT AT1G33340

translation release factor activity PFAM PF00472
PEPTIDE CHAIN RELEASE FACTOR Panther PTHR11075
Class I peptide chain release factor AT AT1G33330

Uncharacterized conserved protein KOG KOG3200
Uncharacterized conserved protein KOG KOG3200
alkylated DNA repair protein alkB homolog 6 KO K10768
oxidoreductases AT AT4G20350

protein binding PFAM PF00856
SET DOMAIN PROTEINS Panther PTHR22884
Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing KOG KOG1082
histone-lysine N-methyltransferase ASHH3 AT AT2G44150

Ribosomal protein S3, C-terminal domain PFAM PF00189
30S RIBOSOMAL PROTEIN S3 Panther PTHR11760
40S ribosomal protein S3 KOG KOG3181
RP-S3e, RPS3; small subunit ribosomal protein S3e [GO:0005843 ] KO K02985
iron-sulfur cluster binding GO GO:0051536
cellular protein metabolic process GO GO:0044267
endocrine pancreas development GO GO:0031018
viral transcription GO GO:0019083
viral infectious cycle GO GO:0019058
gene expression GO GO:0010467
viral reproduction GO GO:0016032
translational termination GO GO:0006415
translational initiation GO GO:0006413
protein binding GO GO:0005515
NF-kappaB binding GO GO:0051059
negative regulation of DNA repair GO GO:0045738
ruffle membrane GO GO:0032587
negative regulation of NF-kappaB transcription factor activity GO GO:0032088
ribonucleoprotein complex GO GO:0030529
protein kinase binding GO GO:0019901
dendrite GO GO:0030425
endomembrane system GO GO:0012505
response to DNA damage stimulus GO GO:0006974
activation of caspase activity GO GO:0006919
translational elongation GO GO:0006414
induction of apoptosis GO GO:0006917
cytoplasm GO GO:0005737
cytosol GO GO:0005829
nucleus GO GO:0005634
intracellular GO GO:0005622
endonuclease activity GO GO:0004519
DNA-(apurinic or apyrimidinic site) lyase activity GO GO:0003906
mRNA binding GO GO:0003729
RNA binding GO GO:0003723
damaged DNA binding GO GO:0003684
vacuolar membrane GO GO:0005774
vacuole GO GO:0005773
chloroplast GO GO:0009507
response to abiotic stimulus GO GO:0009628
response to salt stress GO GO:0009651
membrane GO GO:0016020
nucleolus GO GO:0005730
cytosolic ribosome GO GO:0022626
translation GO GO:0006412
cytosolic small ribosomal subunit GO GO:0022627
structural constituent of ribosome GO GO:0003735
RNA binding PFAM PF07650
intracellular PFAM PF00189
30S RIBOSOMAL PROTEIN S3 Panther PTHR11760
40S ribosomal protein S3 KOG KOG3181
small subunit ribosomal protein S3e KO K02985
Ribosomal protein S3 family protein AT AT5G35530

Peroxidase PFAM PF00141
Peroxidase. EC 1.11.1.7
E1.11.1.7; peroxidase [EC:1.11.1.7 ] [GO:0004601 ] KO K00430
peroxidase activity PFAM PF00141
peroxidase EC 1.11.1.7
peroxidase [EC:1.11.1.7] KO K00430
Peroxidase superfamily protein AT AT4G33420

SFT2-like protein PFAM PF07770
UNCHARACTERIZED Panther PTHR23137
Membrane protein involved in ER to Golgi transport KOG KOG2887
vesicle-mediated transport PFAM PF04178
transport Panther PTHR23137
Membrane protein involved in ER to Golgi transport KOG KOG2887
Got1/Sft2-like vescicle transport protein family AT AT5G23550

Catalytic LigB subunit of aromatic ring-opening dioxygenase PFAM PF02900
ferrous iron binding PFAM PF02900
catalytic LigB subunit of aromatic ring-opening dioxygenase family AT AT4G15093

ferrous iron binding PFAM PF02900
catalytic LigB subunit of aromatic ring-opening dioxygenase family AT AT4G15093

gb def: similar to myb binding protein (p160) 1a, nuclear protein p160 [mus musculus] Panther PTHR13213:SF1
DNA polymerase V family AT AT5G64420

Histone deacetylation protein Rxt3 PFAM PF08642
Uncharacterized conserved protein KOG KOG4843
Histone deacetylation protein Rxt3 PFAM PF08642
Uncharacterized conserved protein KOG KOG4843
AT AT5G08450

nucleic acid binding PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432
ortholog of human splicing factor SC35 AT AT5G64200

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT2G40240

Arabidopsis protein of unknown function PFAM PF03087

alpha/beta hydrolase fold PFAM PF07859
MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Panther PTHR23024
Arylacetamide deacetylase KOG KOG1515
PFAM PF10340
Carboxylesterase PFAM PF00135
hydrolase activity PFAM PF07859
MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Panther PTHR23024
Arylacetamide deacetylase KOG KOG1515
carboxyesterase 18 AT AT5G23530

alpha/beta hydrolase fold PFAM PF07859
MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Panther PTHR23024
Arylacetamide deacetylase KOG KOG1515
PFAM PF10340
Carboxylesterase PFAM PF00135
hydrolase activity PFAM PF07859
MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Panther PTHR23024
Arylacetamide deacetylase KOG KOG1515
carboxyesterase 18 AT AT5G23530

MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Panther PTHR23024
hydrolase activity PFAM PF07859
MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Panther PTHR23024
carboxyesterase 18 AT AT5G23530

CBS domain pair PFAM PF00571
CHLORIDE CHANNEL Panther PTHR11689
Cl- channel CLC-7 and related proteins (CLC superfamily) KOG KOG0474
CLCNF; chloride channel, other eukaryote [TC:1.A.11 ] KO K05393
voltage-gated chloride channel activity PFAM PF00654
protein binding PFAM PF00571
voltage-gated chloride channel activity Panther PTHR11689
Cl- channel CLC-7 and related proteins (CLC superfamily) KOG KOG0474
chloride channel C AT AT5G49890

eIF-6 family PFAM PF01912
TRANSLATION INITIATION FACTOR 6 Panther PTHR10784
Translation initiation factor 6 (eIF-6) KOG KOG3185
eIF-6, eif6; translation initiation factor eIF-6 [COG:COG1976 ] [GO:0003743 ] KO K03264
cellular response to abscisic acid stimulus GO GO:0071215
cytosol GO GO:0005829
nucleus GO GO:0005634
ribosome binding GO GO:0043022
nucleolus GO GO:0005730
embryo development ending in seed dormancy GO GO:0009793
translational initiation GO GO:0006413
translation initiation factor activity GO GO:0003743
mature ribosome assembly PFAM PF01912
mature ribosome assembly Panther PTHR10784
Translation initiation factor 6 (eIF-6) KOG KOG3185
translation initiation factor eIF-6 KO K03264
Translation initiation factor IF6 AT AT3G55620

TCP-1/cpn60 chaperonin family PFAM PF00118
CHAPERONIN Panther PTHR11353
Chaperonin complex component, TCP-1 gamma subunit (CCT3) KOG KOG0364
unfolded protein binding GO GO:0051082
protein folding GO GO:0006457
cellular protein metabolic process GO GO:0044267
ATP binding GO GO:0005524
cellular protein metabolic process PFAM PF00118
cellular protein metabolic process Panther PTHR11353
Chaperonin complex component, TCP-1 gamma subunit (CCT3) KOG KOG0364
TCP-1/cpn60 chaperonin family protein AT AT5G26360

GYF domain PFAM PF02213
FAMILY NOT NAMED Panther PTHR14445
protein binding PFAM PF02201
transcription initiation, DNA-dependent PFAM PF03126
protein binding PFAM PF02213
GRB10 INTERACTING GYF PROTEIN Panther PTHR14445
SWIB/MDM2 domain;Plus-3;GYF AT AT5G08430

sequence-specific DNA binding PFAM PF00808
TATA-BINDING PROTEIN-ASSOCIATED PHOSPHOPROTEIN Panther PTHR11064
nuclear factor Y, subunit B1 AT AT2G38880

Bowman-Birk serine protease inhibitor family PFAM PF00228
extracellular region PFAM PF00228

extracellular region PFAM PF00228

extracellular region PFAM PF00228

Bowman-Birk serine protease inhibitor family PFAM PF00228
extracellular region PFAM PF00228

Bowman-Birk serine protease inhibitor family PFAM PF00228
extracellular region PFAM PF00228

Protein of unknown function, DUF599 PFAM PF04654
Protein of unknown function, DUF599 PFAM PF04654
Protein of unknown function, DUF599 AT AT4G31330

Protein of unknown function, DUF599 PFAM PF04654
Protein of unknown function, DUF599 PFAM PF04654
Protein of unknown function, DUF599 AT AT5G10580

PLANT U-BOX 39 AT AT3G47820

Protein of unknown function, DUF599 PFAM PF04654
Protein of unknown function, DUF599 AT AT4G31330

Protein of unknown function, DUF599 PFAM PF04654
Protein of unknown function, DUF599 PFAM PF04654
Protein of unknown function, DUF599 AT AT4G31330

Oxidoreductase family, C-terminal alpha/beta domain PFAM PF02894
OXIDOREDUCTASES Panther PTHR22604
Dimeric dihydrodiol dehydrogenase KOG KOG2741
oxidoreductase activity PFAM PF01408
oxidoreductase activity PFAM PF02894
OXIDOREDUCTASES Panther PTHR22604
Dimeric dihydrodiol dehydrogenase KOG KOG2741
Oxidoreductase family protein AT AT4G09670

nuclear chromosome PFAM PF04855
transcription regulatory protein SNF5, putative (BSH) AT AT3G17590

regulation of transcription from RNA polymerase II promoter PFAM PF10280
Expressed protein AT AT3G01435

Plant protein of unknown function PFAM PF03140
Plant protein of unknown function (DUF247) AT AT3G02645

Plant protein of unknown function PFAM PF03140
Plant protein of unknown function (DUF247) AT AT3G02645

ABC-2 type transporter PFAM PF01061
ATP-BINDING CASSETTE TRANSPORTER Panther PTHR19241
Transporter, ABC superfamily (Breast cancer resistance protein) KOG KOG0061
fatty acid transport GO GO:0015908
cutin transport GO GO:0080051
fatty acid transporter activity GO GO:0015245
plasma membrane GO GO:0005886
external side of plasma membrane GO GO:0009897
ATPase activity, coupled to transmembrane movement of substances GO GO:0042626
ATPase activity PFAM PF00005
membrane PFAM PF01061
ATP-BINDING CASSETTE TRANSPORTER Panther PTHR19241
Transporter, ABC superfamily (Breast cancer resistance protein) KOG KOG0061
white-brown complex homolog protein 11 AT AT1G17840

Protein of unknown function (DUF789) PFAM PF05623
Protein of unknown function (DUF789) PFAM PF05623
Protein of unknown function (DUF789) AT AT1G73210

Putative integral membrane protein conserved region (DUF2404) PFAM PF10296
FAMILY NOT NAMED Panther PTHR13466
Uncharacterized conserved protein TEX2, contains PH domain KOG KOG2238
Putative integral membrane protein conserved region (DUF2404) PFAM PF10296
TEX2 PROTEIN-RELATED Panther PTHR13466
Uncharacterized conserved protein TEX2, contains PH domain KOG KOG2238
Putative integral membrane protein conserved region (DUF2404) AT AT1G17820

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
mitochondrial editing factor 22 AT AT3G12770

ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE Panther PTHR11452
Alpha-D-galactosidase (melibiase) KOG KOG2366
Activity=alpha-galactosidase; Pathway=stachyose degradation SoyCyc PWY-6527
Activity=alpha-galactosidase; Pathway=melibiose degradation SoyCyc PWY0-1301
Activity=alpha-galactosidase; Pathway=melibiose degradation SoyCyc PWY0-1301
hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF02065
ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE Panther PTHR11452
Alpha-D-galactosidase (melibiase) KOG KOG2366
α-galactosidase EC 3.2.1.22
alpha-galactosidase [EC:3.2.1.22] KO K07407
alpha-galactosidase 2 AT AT5G08370

Major intrinsic protein PFAM PF00230
AQUAPORIN TRANSPORTER Panther PTHR19139
Aquaporin (major intrinsic protein family) KOG KOG0223
aquaporin TIP KO K09873
transport PFAM PF00230
transport Panther PTHR19139
Aquaporin (major intrinsic protein family) KOG KOG0223
aquaporin TIP KO K09873
Aquaporin-like superfamily protein AT AT1G73190

Protein kinase domain PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine rich repeat N-terminal domain PFAM PF08263
protein phosphorylation PFAM PF07714
Protein kinase domain PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
receptor-like kinase 1 AT AT1G48480

hydroxyproline-rich glycoprotein family protein AT AT5G58210

Cytochrome P450 PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP4/CYP19/CYP26 subfamilies KOG KOG0157
Activity=monooxygenase; Pathway=phaseic acid biosynthesis SoyCyc PWY-5271
Activity=monooxygenase; Pathway=suberin biosynthesis SoyCyc PWY-1121
Activity=monooxygenase; Pathway=brassinosteroid biosynthesis II SoyCyc PWY-2582
Activity=monooxygenase; Pathway=phenylpropanoid biosynthesis SoyCyc PWY-361
Activity=monooxygenase; Pathway=rosmarinic acid biosynthesis I SoyCyc PWY-5048
Activity=monooxygenase; Pathway=brassinosteroid biosynthesis I SoyCyc PWY-699
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen PFAM PF00067
CYTOCHROME P450 Panther PTHR19383
Cytochrome P450 CYP4/CYP19/CYP26 subfamilies KOG KOG0157
Cytochrome P450 superfamily protein AT AT1G73340

AT AT1G73350

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine rich repeat N-terminal domain PFAM PF08263
protein binding PFAM PF00560
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Protein kinase family protein with leucine-rich repeat domain AT AT5G25930

pfkB family carbohydrate kinase PFAM PF00294
SUGAR KINASE RELATED Panther PTHR10584
pfkB-like carbohydrate kinase family protein AT AT1G19600

Proteasome A-type and B-type PFAM PF00227
PROTEASOME SUBUNIT ALPHA/BETA Panther PTHR11599
20S proteasome, regulatory subunit alpha type PSMA1/PRE5 KOG KOG0863
Proteasome endopeptidase complex. EC 3.4.25.1
PSMA1; 20S proteasome subunit alpha 6 [EC:3.4.25.1 ] [COG:COG0638 ] KO K02725
proteasome core complex GO GO:0005839
protein catabolic process GO GO:0030163
proteasome complex GO GO:0000502
response to arsenic-containing substance GO GO:0046685
plasma membrane GO GO:0005886
peptidase activity GO GO:0008233
ubiquitin-dependent protein catabolic process GO GO:0006511
threonine-type endopeptidase activity GO GO:0004298
endopeptidase activity GO GO:0004175
ubiquitin-dependent protein catabolic process PFAM PF10584
proteolysis involved in cellular protein catabolic process PFAM PF00227
PROTEASOME SUBUNIT ALPHA/BETA Panther PTHR11599
20S proteasome, regulatory subunit alpha type PSMA1/PRE5 KOG KOG0863
proteasome endopeptidase complex EC 3.4.25.1
20S proteasome subunit alpha 6 [EC:3.4.25.1] KO K02725
proteasome alpha subunit F1 AT AT5G42790

Leucine Rich Repeat PFAM PF00560
innate immune response PFAM PF01582
apoptosis PFAM PF00931
PFAM PF05729
NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE-RELATED Panther PTHR19446:SF7
Apoptotic ATPase KOG KOG4658
Disease resistance protein (TIR-NBS-LRR class) family AT AT5G36930

Zinc-binding dehydrogenase PFAM PF00107
ALCOHOL DEHYDROGENASE RELATED Panther PTHR11695
Alcohol dehydrogenase, class III KOG KOG0022
oxidation-reduction process GO GO:0055114
chloroplast GO GO:0009507
oxidoreductase activity GO GO:0016491
zinc ion binding GO GO:0008270
Activity=alcohol dehydrogenase; Pathway=acetaldehyde biosynthesis I SoyCyc PWY-6333
Activity=alcohol dehydrogenase; Pathway=phenylethanol biosynthesis SoyCyc PWY-5751
Activity=alcohol dehydrogenase; Pathway=ethanol degradation II SoyCyc PWY66-21
Activity=alcohol dehydrogenase; Pathway=sucrose degradation VI (anaerobic) SoyCyc PWY-3801
Activity=alcohol dehydrogenase; Pathway=pyruvate fermentation to ethanol II SoyCyc PWY-5486
Activity=alcohol dehydrogenase; Pathway=UDP-D-xylose biosynthesis SoyCyc PWY-4821
Activity=alcohol dehydrogenase; Pathway=leucine degradation III SoyCyc PWY-5076
Activity=alcohol dehydrogenase; Pathway=sucrose degradation to ethanol and lactate anaerobic SoyCyc PWY-3801
Activity=alcohol dehydrogenase; Pathway=valine degradation II SoyCyc PWY-5057
Activity=alcohol dehydrogenase; Pathway=oxidative ethanol degradation I SoyCyc PWY66-21
Activity=alcohol dehydrogenase; Pathway=phenylethanol biosynthesis SoyCyc PWY-5751
Activity=alcohol dehydrogenase; Pathway=UDP-sugars interconversion SoyCyc PWY-5114
Activity=alcohol dehydrogenase; Pathway=Glycine betaine biosynthesis II gram-positive bacteria SoyCyc PWY-3722
Activity=alcohol dehydrogenase; Pathway=Galactose degradation II SoyCyc PWY-3821
Activity=alcohol dehydrogenase; Pathway=colanic acid building blocks biosynthesis SoyCyc COLANSYN-PWY
Activity=alcohol dehydrogenase; Pathway=pyruvate fermentation to ethanol II SoyCyc PWY-5486
Activity=alcohol dehydrogenase; Pathway=isoleucine degradation II SoyCyc PWY-5078
oxidoreductase activity PFAM PF08240
potassium ion transport PFAM PF02254
oxidoreductase activity PFAM PF00107
oxidoreductase activity Panther PTHR11695
Alcohol dehydrogenase, class III KOG KOG0022
alcohol dehydrogenase EC 1.1.1.1
alcohol dehydrogenase [EC:1.1.1.1] KO K00001
GroES-like zinc-binding dehydrogenase family protein AT AT5G24760

Leucine Rich Repeat PFAM PF00560
innate immune response PFAM PF01582
Disease resistance protein (TIR-NBS-LRR class) family AT AT5G36930

Protein of unknown function (DUF1308) PFAM PF07000
UNCHARACTERIZED DUF1308 Panther PTHR13379
Uncharacterized conserved protein KOG KOG4529
Protein of unknown function (DUF1308) PFAM PF07000
UNCHARACTERIZED DUF1308 Panther PTHR13379
Uncharacterized conserved protein KOG KOG4529
AT AT1G73380

cellular_component GO GO:0005575
molecular_function GO GO:0003674
BRO1-like domain PFAM PF03097
Endosomal targeting BRO1-like domain-containing protein AT AT1G73390

DNA replication factor CDT1 like PFAM PF08839
DNA replication factor CDT1 like PFAM PF08839
homolog of yeast CDT1 B homolog of yeast CDT1 B AT AT3G54710

kokopelli AT AT5G63720

DNA binding PFAM PF02892

GLUCOSYL/GLUCURONOSYL TRANSFERASES Panther PTHR11926
UDP-glucuronosyl and UDP-glucosyl transferase KOG KOG1192
transferase activity, transferring hexosyl groups PFAM PF00201
transferase activity, transferring hexosyl groups Panther PTHR11926
UDP-glucuronosyl and UDP-glucosyl transferase KOG KOG1192
UDP-glucosyl transferase 71B6 AT AT3G21780

Trypsin and protease inhibitor PFAM PF00197
endopeptidase inhibitor activity PFAM PF00197
Kunitz family trypsin and protease inhibitor protein AT AT1G17860

Trypsin and protease inhibitor PFAM PF00197
endopeptidase inhibitor activity PFAM PF00197
Kunitz family trypsin and protease inhibitor protein AT AT1G17860

Trypsin and protease inhibitor PFAM PF00197
endopeptidase inhibitor activity PFAM PF00197
Kunitz family trypsin and protease inhibitor protein AT AT1G17860

Trypsin and protease inhibitor PFAM PF00197
endopeptidase inhibitor activity PFAM PF00197
Kunitz family trypsin and protease inhibitor protein AT AT1G17860

Trypsin and protease inhibitor PFAM PF00197
endopeptidase inhibitor activity PFAM PF00197
Kunitz family trypsin and protease inhibitor protein AT AT1G17860

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain