Genes Covered By A Chromosome Alteration FN0120100.M2.5

Gene Name

Gene Annotation

Glyma10g00210

DNA2/NAM7 HELICASE FAMILY Panther PTHR10887
DNA helicase KOG KOG1803
hydrolase activity PFAM PF04851
ATP-dependent DNA helicase activity PFAM PF00580
Putative ATPase (DUF699) PFAM PF05127
DNA2/NAM7 HELICASE FAMILY Panther PTHR10887
DNA helicase KOG KOG1803
P-loop containing nucleoside triphosphate hydrolases superfamily protein AT AT5G35970

Glyma10g00220

Transferase family PFAM PF02458
transferase activity, transferring acyl groups other than amino-acyl groups PFAM PF02458
HXXXD-type acyl-transferase family protein AT AT5G17540

Glyma10g00230

Glyma10g00250

AT AT3G01680

Glyma10g00260

AT AT3G01680

Glyma10g00280

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PENTATRICOPEPTIDE REPEAT 596 AT AT1G80270

Glyma10g00291

nucleus PFAM PF02309
indole-3-acetic acid inducible AT AT4G14560

Glyma10g00300

WD domain, G-beta repeat PFAM PF00400
WD40 REPEAT PROTEIN Panther PTHR19846
U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) KOG KOG0272
non-specific serine/threonine protein kinase EC 2.7.11.1
serine/threonine-protein kinase PRP4 [EC:2.7.11.1] KO K08827
pre-mRNA processing factor 4 (PRP4) like PFAM PF08799
WD domain, G-beta repeat PFAM PF00400
WD40 REPEAT PROTEIN Panther PTHR19846
U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) KOG KOG0272
U4/U6 small nuclear ribonucleoprotein PRP4 KO K12662
WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related AT AT2G41500

Glyma10g00310

NAD(P)H dehydrogenase 18 AT AT5G43750

Glyma10g00320

Prolyl oligopeptidase family PFAM PF00326
PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED Panther PTHR11731
Dipeptidyl aminopeptidase KOG KOG2100
serine-type peptidase activity PFAM PF00326
hydrolase activity PFAM PF07859
PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED Panther PTHR11731
Dipeptidyl aminopeptidase KOG KOG2100
acylaminoacyl-peptidase-related AT AT4G14570

Glyma10g00350

Prolyl oligopeptidase family PFAM PF00326
PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED Panther PTHR11731
Dipeptidyl aminopeptidase KOG KOG2100
Acylaminoacyl-peptidase. EC 3.4.19.1
acylaminoacyl-peptidase [EC:3.4.19.1] KO K01303
WD40-like Beta Propeller Repeat PFAM PF07676
serine-type peptidase activity PFAM PF00326
hydrolase activity PFAM PF07859
PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED Panther PTHR11731
Dipeptidyl aminopeptidase KOG KOG2100
acylaminoacyl-peptidase EC 3.4.19.1
acylaminoacyl-peptidase [EC:3.4.19.1] KO K01303
acylaminoacyl-peptidase-related AT AT4G14570

Glyma10g00360

Transcription initiation factor IID, 18kD subunit PFAM PF02269
TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED Panther PTHR11380
Transcription initiation factor IID subunit KOG KOG3901
TFIID11; transcription initiation factor TFIID subunit D11 [GO:0005669 0016251 ] KO K03127
transcription from RNA polymerase II promoter PFAM PF02269
transcription from RNA polymerase II promoter Panther PTHR11380
Transcription initiation factor IID subunit KOG KOG3901
transcription initiation factor TFIID subunit 13 KO K03127
TBP-associated factor 13 AT AT1G02680

Glyma10g00371

binding PFAM PF02020
EUKARYOTIC TRANSLATION INITIATION FACTOR Panther PTHR23001
Translation initiation factor IF2/IF5 AT AT1G77840

Glyma10g00380

SWIM zinc finger PFAM PF04434
response to red or far red light GO GO:0009639
zinc ion binding GO GO:0008270
cellular_component GO GO:0005575
FAR1 DNA-binding domain PFAM PF03101
MULE transposase domain PFAM PF10551
zinc ion binding PFAM PF04434
FAR1-related sequence 11 AT AT1G10240

Glyma10g00390

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT3G23020

Glyma10g00420

tRNAHis guanylyltransferase PFAM PF04446
UNCHARACTERIZED Panther PTHR12729
Uncharacterized conserved protein KOG KOG2721
Nucleotidyltransferases. EC 2.7.7.-
tRNA(His) guanylyltransferase [EC:2.7.7.-] KO K10761
tRNAHis guanylyltransferase PFAM PF04446
UNCHARACTERIZED Panther PTHR12729
Uncharacterized conserved protein KOG KOG2721
Nucleotidyltransferases. EC 2.7.7.-
tRNA(His) guanylyltransferase [EC:2.7.7.-] KO K10761
tRNAHis guanylyltransferase AT AT2G32320

Glyma10g00430

NAF domain PFAM PF03822
SERINE/THREONINE PROTEIN KINASE Panther PTHR22971
Serine/threonine protein kinase KOG KOG0583
protein phosphorylation PFAM PF00069
Protein tyrosine kinase PFAM PF07714
signal transduction PFAM PF03822
SERINE/THREONINE PROTEIN KINASE Panther PTHR22971
Serine/threonine protein kinase KOG KOG0583
CBL-interacting protein kinase 7 AT AT3G23000

Glyma10g00440

Chalcone and stilbene synthases, C-terminal domain PFAM PF02797
Activity=fatty acid elongase; Pathway=sciadonic acid biosynthesis SoyCyc PWY-6598
Activity=fatty acid elongase; Pathway=wax esters biosynthesis I SoyCyc PWY-5884
fatty acid biosynthetic process PFAM PF08392
lipid biosynthetic process PFAM PF08541
Chalcone and stilbene synthases, C-terminal domain PFAM PF02797
3-ketoacyl-CoA synthase 11 AT AT2G26640

Glyma10g00450

BRG-1 ASSOCIATED FACTOR 250 (BAF250) Panther PTHR12656
BRG-1 ASSOCIATED FACTOR 250 (BAF250) Panther PTHR12656
ARM repeat superfamily protein AT AT3G22990

Glyma10g00455

Glyma10g00460

Protein of unknown function (DUF506) PFAM PF04720
Protein of unknown function (DUF506) PFAM PF04720
Protein of unknown function (DUF506) AT AT3G22970

Glyma10g00470

EF hand PFAM PF00036
CALCIUM BINDING PROTEIN Panther PTHR23050
Calmodulin and related proteins (EF-Hand superfamily) KOG KOG0027
CALM; calmodulin KO K02183
signal transducer activity GO GO:0004871
response to mechanical stimulus GO GO:0009612
plasma membrane GO GO:0005886
nucleus GO GO:0005634
signal transduction GO GO:0007165
calcium-mediated signaling GO GO:0019722
detection of calcium ion GO GO:0005513
calcium ion binding GO GO:0005509
biological_process GO GO:0008150
protein binding GO GO:0005515
cellular_component GO GO:0005575
EF hand PFAM PF00036
CALCIUM BINDING PROTEIN Panther PTHR23050
Calmodulin and related proteins (EF-Hand superfamily) KOG KOG0027
calcium-binding protein CML KO K13448
calmodulin-like 11 AT AT3G22930

Glyma10g00490

Ribosomal protein S8e PFAM PF01201
FAMILY NOT NAMED Panther PTHR12642
Uncharacterized conserved protein related to ribosomal protein S8E KOG KOG3163
translation GO GO:0006412
ribosome biogenesis GO GO:0042254
ribosome GO GO:0005840
structural constituent of ribosome GO GO:0003735
Ribosomal protein S8e PFAM PF01201
FAMILY NOT NAMED Panther PTHR12642
Uncharacterized conserved protein related to ribosomal protein S8E KOG KOG3163
Ribosomal protein S8e family protein AT AT5G06360

Glyma10g00500

RP-L30e, RPL30; large subunit ribosomal protein L30e [GO:0005842 ] KO K02908
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PFAM PF01248
RIBOSOMAL PROTEIN L30 Panther PTHR11449
60S ribosomal protein L30 KOG KOG2988
cytosolic ribosome GO GO:0022626
translation GO GO:0006412
cytosolic large ribosomal subunit GO GO:0022625
structural constituent of ribosome GO GO:0003735
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PFAM PF01248
intracellular Panther PTHR11449
60S ribosomal protein L30 KOG KOG2988
large subunit ribosomal protein L30e KO K02908
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein AT AT1G36240

Glyma10g00510

Transcription initiation factor IID, 18kD subunit PFAM PF02269
TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED Panther PTHR11380
Transcription initiation factor IID subunit KOG KOG3901
transcription from RNA polymerase II promoter PFAM PF02269
transcription from RNA polymerase II promoter Panther PTHR11380
Transcription initiation factor IID subunit KOG KOG3901
TBP-associated factor 13 AT AT1G02680

Glyma10g00520

Ribosomal L28 family PFAM PF00830
intracellular PFAM PF00830
Ribosomal L28 family AT AT2G33450

Glyma10g00527

Domain of unknown function (DUF1785) PFAM PF08699
protein binding PFAM PF02170
protein binding PFAM PF02171
EUKARYOTIC TRANSLATION INITIATION FACTOR 2C Panther PTHR22891
Translation initiation factor 2C (eIF-2C) and related proteins KOG KOG1041
Stabilizer of iron transporter SufD / Polynucleotidyl transferase AT AT5G43810

Glyma10g00534

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
rna processing factor 2 AT AT1G62670

Glyma10g00542

Glyma10g00550

Dyggve-Melchior-Clausen syndrome protein PFAM PF09742
FAMILY NOT NAMED Panther PTHR12895
Proteins containing regions of low-complexity KOG KOG2225
Dyggve-Melchior-Clausen syndrome protein PFAM PF09742
FAMILY NOT NAMED Panther PTHR12895
Proteins containing regions of low-complexity KOG KOG2225
AT AT1G04200

Glyma10g00560

HSF-type DNA-binding PFAM PF00447
HEAT SHOCK TRANSCRIPTION FACTOR Panther PTHR10015
Heat shock transcription factor KOG KOG0627
sequence-specific DNA binding PFAM PF00447
HEAT SHOCK TRANSCRIPTION FACTOR Panther PTHR10015
Heat shock transcription factor KOG KOG0627
heat shock transcription factor A6B AT AT3G22830

Glyma10g00570

Chlorophyllase PFAM PF07224
Chlorophyllase. EC 3.1.1.14
chlorophyllase [EC:3.1.1.14] KO K08099
chlorophyllase activity PFAM PF07224
PFAM PF03403
chlorophyllase EC 3.1.1.14
chlorophyllase [EC:3.1.1.14] KO K08099
chlorophyllase 2 AT AT5G43860

Glyma10g00580

Putative undecaprenyl diphosphate synthase PFAM PF01255
UNDECAPRENYL PYROPHOSPHATE SYNTHETASE Panther PTHR10291
transferase activity, transferring alkyl or aryl (other than methyl) groups PFAM PF01255
transferase activity, transferring alkyl or aryl (other than methyl) groups Panther PTHR10291
Cis-prenyltransferase KOG KOG1602
Undecaprenyl pyrophosphate synthetase family protein AT AT2G17570

Glyma10g00600

Plant pleckstrin homology-like region PFAM PF08458
Plant protein of unknown function (DUF828) PFAM PF05703
Plant pleckstrin homology-like region PFAM PF08458
Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region AT AT3G22810

Glyma10g00610

Uncharacterized conserved protein (DUF2363) PFAM PF10155
FAMILY NOT NAMED Panther PTHR15975
Uncharacterized conserved protein KOG KOG4508
Uncharacterized conserved protein (DUF2363) PFAM PF10155
UNCHARACTERIZED Panther PTHR15975
Uncharacterized conserved protein KOG KOG4508
AT AT5G18420

Glyma10g00620

AT AT4G14746

Glyma10g00630

IQ calmodulin-binding motif PFAM PF00612
CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR (CAMTA), PLANTS Panther PTHR23335:SF1
protein binding PFAM PF00612
CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR (CAMTA), PLANTS Panther PTHR23335:SF1
IQ-domain 19 AT AT4G14750

Glyma10g00640

Tetratricopeptide repeat PFAM PF07719
CHAPERONE BINDING PROTEIN Panther PTHR22904
Methylmalonate semialdehyde dehydrogenase KOG KOG2449
protein binding PFAM PF00515
Tetratricopeptide repeat PFAM PF07719
CHAPERONE BINDING PROTEIN Panther PTHR22904
Methylmalonate semialdehyde dehydrogenase KOG KOG2449
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT1G04190

Glyma10g00650

Glyma10g00655

Glyma10g00660

COP1-interacting protein-related AT AT5G43310

Glyma10g00670

Protein phosphatase 2C PFAM PF00481
PROTEIN PHOSPHATASE 2C Panther PTHR13832
Serine/threonine protein phosphatase KOG KOG0698
catalytic activity PFAM PF00481
PROTEIN PHOSPHATASE 2C Panther PTHR13832
Serine/threonine protein phosphatase KOG KOG0698
Protein phosphatase 2C family protein AT AT3G23360

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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