Genes Covered By A Chromosome Alteration FN0111279.03.x2.M4.3

Gene Name

Gene Annotation

Glyma05g22440

Adenylylsulphate kinase PFAM PF01583
ADENYLSULFATE KINASE/SULFATE ADENYLTRANSFERASE Panther PTHR11055
Adenosine 5'-phosphosulfate kinase KOG KOG0635
Adenylylsulfate kinase. EC 2.7.1.25
E2.7.1.25, cysC; adenylylsulfate kinase [EC:2.7.1.25 ] [COG:COG0529 ] [GO:0004020 ] KO K00860
Activity=adenylyl-sulfate kinase; Pathway=sulfate activation for sulfonation SoyCyc PWY-5340
Activity=adenylyl-sulfate kinase; Pathway=sulfate activation for sulfonation SoyCyc PWY-5340
sulfate assimilation PFAM PF01583
ADENYLSULFATE KINASE/SULFATE ADENYLTRANSFERASE Panther PTHR11055
Adenosine 5'-phosphosulfate kinase KOG KOG0635
adenylyl-sulfate kinase EC 2.7.1.25
adenylylsulfate kinase [EC:2.7.1.25] KO K00860
APS kinase AT AT2G14750
adenosine-5\'-phosphosulfate (APS) kinase 4 AT AT5G67520

Glyma05g22445

Glyma05g22450

AT AT3G49890

Glyma05g22460

GRAS family transcription factor PFAM PF03514
GRAS family transcription factor PFAM PF03514
GRAS family transcription factor AT AT4G37650

Glyma05g22470

ENDO XYLANASE Panther PTHR22925
hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF04616
hydrolase activity, hydrolyzing O-glycosyl compounds Panther PTHR22925
Arabinanase/levansucrase/invertase AT AT5G67540

Glyma05g22480

Miro-like protein PFAM PF08477
ARF-RELATED Panther PTHR11711
GTP-binding ADP-ribosylation factor-like protein KOG KOG0075
Arf/Sar family, other KO K07977
protein transport GO GO:0015031
small GTPase mediated signal transduction GO GO:0007264
intracellular protein transport GO GO:0006886
endomembrane system GO GO:0012505
vacuolar membrane GO GO:0005774
cytoplasm GO GO:0005737
vacuole GO GO:0005773
nucleus GO GO:0005634
plasma membrane GO GO:0005886
GTP binding GO GO:0005525
GTP binding PFAM PF00025
Signal recognition particle receptor beta subunit PFAM PF09439
Miro-like protein PFAM PF08477
Ras family PFAM PF00071
PFAM PF04670
GTP binding PFAM PF00009
GTP binding Panther PTHR11711
GTP-binding ADP-ribosylation factor-like protein KOG KOG0075
Arf/Sar family, other KO K07977
ADP-ribosylation factor-like A1C AT AT3G49870

Glyma05g22491

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Tetratricopeptide repeat (TPR)-like superfamily protein AT AT5G67570

Glyma05g22500

linker histone H1 and H5 family PFAM PF00538
gb def: Telomeric repeat binding factor 1 Panther PTHR21717:SF4
Myb-like DNA-binding domain PFAM PF00249
nucleosome PFAM PF00538
HISTONE H1/H5 Panther PTHR11467
Homeodomain-like/winged-helix DNA-binding family protein AT AT5G67580

Glyma05g22510

ETC complex I subunit conserved region PFAM PF04800
FAMILY NOT NAMED Panther PTHR12219
NADH:ubiquinone oxidoreductase, NDUFS4/18 kDa subunit KOG KOG3389
NADH dehydrogenase (ubiquinone). EC 1.6.5.3
NDUFS4; NADH dehydrogenase (ubiquinone) Fe-S protein 4 [EC:1.6.5.3 1.6.99.3 ] [GO:0008137 0003954 ] KO K03937
NADH dehydrogenase. EC 1.6.99.3
electron transport chain PFAM PF04800
electron transport chain Panther PTHR12219
NADH:ubiquinone oxidoreductase, NDUFS4/18 kDa subunit KOG KOG3389
NADH:ubiquinone reductase (H+-translocating) EC 1.6.5.3
NADH dehydrogenase EC 1.6.99.3
NADH dehydrogenase (ubiquinone) Fe-S protein 4 [EC:1.6.5.3 1.6.99.3] KO K03937
NADH-ubiquinone oxidoreductase-related AT AT5G67590

Glyma05g22580

Acetyltransferase (GNAT) family PFAM PF00583
Acetylglutamate kinase/acetylglutamate synthase KOG KOG2436
cellular amino acid biosynthetic process PFAM PF00696
N-acetyltransferase activity PFAM PF00583
RIBOSOMAL-PROTEIN-ALANINE ACETYLTRANSFERASE Panther PTHR23091:SF1
Acetylglutamate kinase/acetylglutamate synthase KOG KOG2436
N-acetyl-l-glutamate synthase 1 AT AT2G22910

Glyma05g22606

UNCHARACTERIZED Panther PTHR13083

Glyma05g22633

Glyma05g22660

AT AT5G67620

Glyma05g22670

Cyclin, N-terminal domain PFAM PF00134
CYCLINS Panther PTHR10177
G1/S-specific cyclin D KOG KOG0656
Cyclin, N-terminal domain PFAM PF00134
nucleus PFAM PF02984
CYCLINS Panther PTHR10177
G1/S-specific cyclin D KOG KOG0656
CYCLIN D1;1 AT AT1G70210

Glyma05g22680

galactosyl transferase GMA12/MNN10 family PFAM PF05637
Subunit of Golgi mannosyltransferase complex KOG KOG4748
transferase activity, transferring hexosyl groups PFAM PF05637
Subunit of Golgi mannosyltransferase complex KOG KOG4748
Galactosyl transferase GMA12/MNN10 family protein AT AT4G37690

Glyma05g22730

Sigma-70 region 3 PFAM PF04539
sigma factor activity PFAM PF04542
sigma factor activity PFAM PF04539
RNApolymerase sigma-subunit F AT AT2G36990

Glyma05g22740

AT AT4G37700

Glyma05g22751

ubiquitin-protein ligase activity PFAM PF04564
WDSAM1 PROTEIN Panther PTHR22849
ARM repeat superfamily protein AT AT3G49810

Glyma05g22760

VQ motif PFAM PF05678
VQ motif PFAM PF05678
VQ motif-containing protein AT AT2G22880

Glyma05g22770

ACT domain PFAM PF01842
amino acid binding PFAM PF01842
ACT domain repeat 1 AT AT5G65890

Glyma05g22782

AT AT5G65880

Glyma05g22794

RNA binding PFAM PF00013
RNA-BINDING PROTEIN RELATED Panther PTHR10288
RNA-binding KH domain-containing protein AT AT5G15270

Glyma05g22807

AT AT5G41980

Glyma05g22820

AT AT4G24026

Glyma05g22850

RNA polymerase III subunit C17 PFAM PF09417
FAMILY NOT NAMED Panther PTHR15561
DNA-directed RNA polymerase activity PFAM PF03874
CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN Panther PTHR15561
Predicted RNA polymerase III subunit C17 KOG KOG4168
RNA polymerase II, Rpb4, core protein AT AT5G62950

Glyma05g22855

Aluminium induced protein PFAM PF12504
Aluminium induced protein with YGL and LRDR motifs AT AT5G19140

Glyma05g22860

Basic region leucine zipper PFAM PF07716
Basic region leucine zipper PFAM PF07716
protein dimerization activity PFAM PF00170
basic leucine-zipper 5 AT AT3G49760

Glyma05g22880

Glyma05g22960

short chain dehydrogenase PFAM PF00106
SHORT-CHAIN DEHYDROGENASES/REDUCTASE Panther PTHR19410
1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases KOG KOG1209
oxidoreductase activity PFAM PF00106
KR domain PFAM PF08659
SHORT-CHAIN DEHYDROGENASES/REDUCTASE Panther PTHR19410
1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases KOG KOG1209
NAD(P)-binding Rossmann-fold superfamily protein AT AT5G10050

Glyma05g22970

AP2 domain PFAM PF00847
sequence-specific DNA binding transcription factor activity PFAM PF00847
Integrase-type DNA-binding superfamily protein AT AT4G37750

Glyma05g22985

regulation of transcription, DNA-dependent PFAM PF02365
NAC domain containing protein 75 AT AT4G29230

Glyma05g23000

Methyltransferase domain PFAM PF08241
AT AT3G49720

Glyma05g23020

Aminotransferase class I and II PFAM PF00155
SUBGROUP I AMINOTRANSFERASE RELATED Panther PTHR11751
1-aminocyclopropane-1-carboxylate synthase, and related proteins KOG KOG0256
1-aminocyclopropane-1-carboxylate synthase. EC 4.4.1.14
E4.4.1.14; 1-aminocyclopropane-1-carboxylate synthase [EC:4.4.1.14 ] [GO:0016847 ] KO K01762
Activity=L-vinylglycine deaminase; Pathway=ethylene biosynthesis I (plants) SoyCyc ETHYL-PWY
Activity=L-vinylglycine deaminase; Pathway=methionine salvage pathway SoyCyc PWY-4361-ARA
1-aminocyclopropane-1-carboxylate biosynthetic process GO GO:0042218
1-aminocyclopropane-1-carboxylate synthase activity GO GO:0016847
Activity=L-vinylglycine deaminase; Pathway=ethylene biosynthesis from methionine SoyCyc ETHYL-PWY
transferase activity, transferring nitrogenous groups PFAM PF00155
SUBGROUP I AMINOTRANSFERASE RELATED Panther PTHR11751
1-aminocyclopropane-1-carboxylate synthase, and related proteins KOG KOG0256
1-aminocyclopropane-1-carboxylate synthase EC 4.4.1.14
1-aminocyclopropane-1-carboxylate synthase [EC:4.4.1.14] KO K01762
1-amino-cyclopropane-1-carboxylate synthase 8 AT AT4G37770

Glyma05g23032

Glyma05g23044

RIBOSOME BIOGENESIS PROTEIN Panther PTHR12858
P-loop containing nucleoside triphosphate hydrolases superfamily protein AT AT1G06720

Glyma05g23056

P-loop containing nucleoside triphosphate hydrolases superfamily protein AT AT1G80380

Glyma05g23068

TRAF-like superfamily protein AT AT1G04300

Glyma05g23080

Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Transcription factor, Myb superfamily KOG KOG0048
myb proto-oncogene protein, plant KO K09422
Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Transcription factor, Myb superfamily KOG KOG0048
myb proto-oncogene protein, plant KO K09422
myb domain protein 84 AT AT3G49690

Glyma05g23090

PEROXIREDOXIN Panther PTHR10681
peroxiredoxin activity PFAM PF10417
PEROXIREDOXIN Panther PTHR10681
Thioredoxin superfamily protein AT AT3G11630

Glyma05g23100

little nuclei4 AT AT5G65770

Glyma05g23125

serine-type peptidase activity PFAM PF05577
serine-type peptidase activity Panther PTHR11010
Serine carboxypeptidase S28 family protein AT AT5G65760

Glyma05g23150

Homeobox associated leucine zipper PFAM PF02183
HOMEOBOX PROTEIN Panther PTHR19418
Transcription factor tinman/NKX2-3, contains HOX domain KOG KOG0842
sequence-specific DNA binding PFAM PF00046
nucleus PFAM PF02183
HOMEOBOX PROTEIN Panther PTHR19418
Transcription factor tinman/NKX2-3, contains HOX domain KOG KOG0842
Homeobox-leucine zipper protein family AT AT4G37790

Glyma05g23170

Xyloglucan endo-transglycosylase (XET) C-terminus PFAM PF06955
Xyloglucan:xyloglucosyl transferase. EC 2.4.1.207
xyloglucan:xyloglucosyl transferase [EC:2.4.1.207] KO K08235
hydrolase activity, hydrolyzing O-glycosyl compounds PFAM PF00722
cellular glucan metabolic process PFAM PF06955
xyloglucan:xyloglucosyl transferase EC 2.4.1.207
xyloglucan:xyloglucosyl transferase [EC:2.4.1.207] KO K08235
xyloglucan endotransglucosylase/hydrolase 6 AT AT5G65730

Glyma05g23180

Membrane transport protein PFAM PF03547
putative transport protein KO K07088
transmembrane transport PFAM PF03547
KO K13947
Auxin efflux carrier family protein AT AT5G15100

Glyma05g23190

Glyma05g23201

AT AT4G37810

Glyma05g23210

AT AT4G37820

Glyma05g23220

CYTOCHROME C OXIDASE POLYPEPTIDE VIA Panther PTHR11504
Cytochrome c oxidase, subunit VIa/COX13 KOG KOG3469
Cytochrome-c oxidase. EC 1.9.3.1
COX6A; cytochrome c oxidase subunit VIa [EC:1.9.3.1 ] [GO:0004129 ] KO K02266
mitochondrial inner membrane PFAM PF02046
mitochondrial inner membrane Panther PTHR11504
Cytochrome c oxidase, subunit VIa/COX13 KOG KOG3469
cytochrome-c oxidase EC 1.9.3.1
cytochrome c oxidase subunit VIa [EC:1.9.3.1] KO K02266
cytochrome c oxidase-related AT AT4G37830

Glyma05g23230

Tubulin/FtsZ family, C-terminal domain PFAM PF03953
TUBULIN Panther PTHR11588
Alpha tubulin KOG KOG1376
tubulin alpha KO K07374
microtubule cytoskeleton GO GO:0015630
protein binding GO GO:0005515
microtubule cytoskeleton organization GO GO:0000226
vacuole GO GO:0005773
nucleolus GO GO:0005730
microtubule GO GO:0005874
cellular response to gravity GO GO:0071258
vacuolar membrane GO GO:0005774
response to cadmium ion GO GO:0046686
plasma membrane GO GO:0005886
chloroplast GO GO:0009507
cytosol GO GO:0005829
response to salt stress GO GO:0009651
membrane GO GO:0016020
cell wall GO GO:0005618
tubulin complex GO GO:0045298
microtubule-based process GO GO:0007017
structural constituent of cytoskeleton GO GO:0005200
protein complex PFAM PF00091
protein complex PFAM PF03953
microtubule Panther PTHR11588
Alpha tubulin KOG KOG1376
tubulin alpha KO K07374
tubulin alpha-4 chain AT AT1G04820
Tubulin/FtsZ family protein AT AT4G14960

Glyma05g23260

Protein tyrosine kinase PFAM PF07714
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
regulation of meristem structural organization GO GO:0009934
anther development GO GO:0048653
microsporocyte differentiation GO GO:0010480
gametophyte development GO GO:0048229
floral organ development GO GO:0048437
regulation of meristem growth GO GO:0010075
plasma membrane GO GO:0005886
kinase activity GO GO:0016301
transmembrane receptor protein tyrosine kinase signaling pathway GO GO:0007169
ATP binding GO GO:0005524
protein phosphorylation GO GO:0006468
protein serine/threonine kinase activity GO GO:0004674
protein self-association GO GO:0043621
receptor serine/threonine kinase binding GO GO:0033612
protein binding GO GO:0005515
Leucine rich repeat N-terminal domain PFAM PF08263
protein binding PFAM PF00560
protein phosphorylation PFAM PF07714
protein phosphorylation PFAM PF00069
SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE Panther PTHR23258
Serine/threonine protein kinase KOG KOG1187
Leucine-rich receptor-like protein kinase family protein AT AT5G65700

Glyma05g23280

Hexokinase PFAM PF03727
HEXOKINASE Panther PTHR19443
Hexokinase KOG KOG1369
Activity=fructokinase activity; Pathway=starch degradation I SoyCyc PWY-842
Activity=fructokinase activity; Pathway=GDP-glucose biosynthesis SoyCyc PWY-5661
Activity=fructokinase activity; Pathway=sucrose degradation VI (anaerobic) SoyCyc PWY-3801
Activity=fructokinase activity; Pathway=sucrose degradation III SoyCyc PWY-621
Activity=fructokinase activity; Pathway=trehalose degradation II (trehalase) SoyCyc PWY0-1182
Activity=fructokinase activity; Pathway=sucrose degradation III SoyCyc PWY-621
Activity=fructokinase activity; Pathway=GDP-glucose biosynthesis SoyCyc PWY-5661
Activity=fructokinase activity; Pathway=sucrose degradation I SoyCyc SUCUTIL-PWY
Activity=fructokinase activity; Pathway=sucrose degradation to ethanol and lactate anaerobic SoyCyc PWY-3801
Activity=fructokinase activity; Pathway=Glycolysis III SoyCyc ANAGLYCOLYSIS-PWY
Activity=fructokinase activity; Pathway=trehalose degradation II trehalase SoyCyc PWY0-1182
Activity=fructokinase activity; Pathway=Glycogen degradation I SoyCyc GLYCOCAT-PWY
Activity=fructokinase activity; Pathway=Glucose and glucose-1-phosphate degradation SoyCyc GLUCOSE1PMETAB-PWY
Activity=fructokinase activity; Pathway=homolactic fermentation SoyCyc ANAEROFRUCAT-PWY
phosphotransferase activity, alcohol group as acceptor PFAM PF00349
phosphotransferase activity, alcohol group as acceptor PFAM PF03727
phosphotransferase activity, alcohol group as acceptor Panther PTHR19443
Hexokinase KOG KOG1369
hexokinase EC 2.7.1.1
hexokinase [EC:2.7.1.1] KO K00844
hexokinase-like 3 AT AT4G37840

Glyma05g23291

transcription regulator activity PFAM PF00010
CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS Panther PTHR23042
basic helix-loop-helix (bHLH) DNA-binding superfamily protein AT AT4G37850

Glyma05g23300

DNA2/NAM7 HELICASE FAMILY Panther PTHR10887
DNA2/NAM7 HELICASE FAMILY Panther PTHR10887
RNA helicase, putative AT AT5G47010

Glyma05g23330

Helix-loop-helix DNA-binding domain PFAM PF00010
CENTROMERE-BINDING PROTEIN 1, CBP-1 Panther PTHR12565:SF7
transcription regulator activity PFAM PF00010
CENTROMERE-BINDING PROTEIN 1, CBP-1 Panther PTHR12565:SF7
Transcription factor HAND2/Transcription factor TAL1/TAL2/LYL1 KOG KOG4029
basic helix-loop-helix (bHLH) DNA-binding superfamily protein AT AT4G37850

Glyma05g23530

Helix-loop-helix DNA-binding domain PFAM PF00010
CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS Panther PTHR23042
transcription regulator activity PFAM PF00010
MYC Panther PTHR11514
basic helix-loop-helix (bHLH) DNA-binding superfamily protein AT AT4G37850

Glyma05g23547

nucleic acid binding PFAM PF00076
RNA-BINDING PROTEIN Panther PTHR10432

Glyma05g23564

Glyma05g23582

PIF1 helicase PFAM PF05970
HELICASE-RELATED Panther PTHR10492
PIF1 helicase AT AT5G28780

Glyma05g23600

Transposase family tnp2 PFAM PF02992
Transposase family tnp2 PFAM PF02992
cysteine-type peptidase activity PFAM PF02902
Plant transposase (Ptta/En/Spm family) AT AT1G40087

Glyma05g23620

Zinc finger, C2H2 type PFAM PF00096
gb def: Hypothetical zinc finger protein F56D1.1 in chromosome II Panther PTHR23224:SF174
gb def: Hypothetical zinc finger protein F56D1.1 in chromosome II Panther PTHR23224:SF174
C2H2 and C2HC zinc fingers superfamily protein AT AT4G17810