Genes Covered By A Chromosome Alteration FN0110332.03.M3.3

Gene Name

Gene Annotation

Glyma09g36910

Helicase conserved C-terminal domain PFAM PF00271
ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED Panther PTHR10799
SNF2 family DNA-dependent ATPase domain-containing protein KOG KOG0392
Activity=ATPase; Pathway=salvage pathways of adenine, hypoxanthine, and their nucleosides SoyCyc SALVADEHYPOX-PWY
Activity=ATPase; Pathway=salvage pathways of purine nucleosides II plant SoyCyc PWY-5043
hydrolase activity, acting on acid anhydrides PFAM PF12054
protein binding PFAM PF02985
ATP binding PFAM PF00176
helicase activity PFAM PF00271
ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED Panther PTHR10799
SNF2 family DNA-dependent ATPase domain-containing protein KOG KOG0392
DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases AT AT3G54280

Glyma09g36920

DDHD domain PFAM PF02862
SEC-23 INTERACTING PROTEIN P125 Panther PTHR15457
Phosphatidic acid-preferring phospholipase A1, contains DDHD domain KOG KOG2308
metal ion binding PFAM PF02862
SEC-23 INTERACTING PROTEIN P125 Panther PTHR15457
shoot gravitropism 2 (SGR2) AT AT1G31480

Glyma09g36930

AT AT2G44870

Glyma09g36941

intracellular protein transport PFAM PF05008
Snare region anchored in the vesicle membrane C-terminus PFAM PF12352
VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED Panther PTHR21230
V-SNARE KOG KOG1666
Vesicle transport v-SNARE family protein AT AT1G26670

Glyma09g36950

Pectinesterase PFAM PF01095
pectin metabolic process GO GO:0045488
pectinesterase activity GO GO:0030599
plant-type cell wall GO GO:0009505
cell wall GO GO:0005618
cell wall modification PFAM PF01095
pectinesterase EC 3.1.1.11
pectinesterase [EC:3.1.1.11] KO K01051
pectin methylesterase 31 AT AT3G29090

Glyma09g36966

Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
myb proto-oncogene protein, plant KO K09422
myb domain protein 113 AT AT1G66370

Glyma09g36983

Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
myb proto-oncogene protein, plant KO K09422
myb domain protein 113 AT AT1G66370

Glyma09g37000

EXS family PFAM PF03124
XENOTROPIC AND POLYTROPIC MURINE LEUKEMIA VIRUS RECEPTOR Panther PTHR10783
Predicted small molecule transporter KOG KOG1162
SPX domain PFAM PF03105
integral to membrane PFAM PF03124
XENOTROPIC AND POLYTROPIC MURINE LEUKEMIA VIRUS RECEPTOR Panther PTHR10783
Predicted small molecule transporter KOG KOG1162
EXS (ERD1/XPR1/SYG1) family protein AT AT1G14040

Glyma09g37010

Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
myb proto-oncogene protein, plant KO K09422
myb domain protein 113 AT AT1G66370

Glyma09g37020

Cys/Met metabolism PLP-dependent enzyme PFAM PF01053
CYSTEINE/METHIONINE METABOLISM PYRIDOXAL-5-PHOSPHATE ENZYMES Panther PTHR11808
Cystathionine beta-lyases/cystathionine gamma-synthases KOG KOG0053
cystathionine γ-synthase EC 2.5.1.48
E2.5.1.48, metB; cystathionine gamma-synthase [EC:2.5.1.48 ] [COG:COG0626 ] [GO:0003962 ] KO K01739
Activity=cystathionine gamma-synthase; Pathway=methionine biosynthesis I SoyCyc HOMOSER-METSYN-PWY
Activity=cystathionine gamma-synthase; Pathway=homoserine and methionine biosynthesis SoyCyc METSYN-PWY
Activity=cystathionine gamma-synthase; Pathway=superpathway of lysine, threonine and methionine biosynthesis I SoyCyc P4-PWY
Activity=cystathionine gamma-synthase; Pathway=aspartate superpathway SoyCyc PWY0-781
Activity=cystathionine gamma-synthase; Pathway=methionine and methyl-donor-molecule biosynthesis SoyCyc MET-SAM-PWY
cellular amino acid metabolic process PFAM PF01053
lyase activity PFAM PF01212
cellular amino acid metabolic process Panther PTHR11808
Cystathionine beta-lyases/cystathionine gamma-synthases KOG KOG0053
cystathionine γ-synthase EC 2.5.1.48
cystathionine gamma-synthase [EC:2.5.1.48] KO K01739
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein AT AT3G01120

Glyma09g37030

Glyma09g37040

Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Transcription factor, Myb superfamily KOG KOG0048
Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Transcription factor, Myb superfamily KOG KOG0048
myb domain protein 106 AT AT3G01140

Glyma09g37050

No apical meristem (NAM) protein PFAM PF02365
regulation of transcription, DNA-dependent PFAM PF02365
NAC domain containing protein 100 AT AT5G61430

Glyma09g37060

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Pentatricopeptide repeat (PPR) superfamily protein AT AT5G15300

Glyma09g37070

KH domain PFAM PF00013
RNA-BINDING PROTEIN RELATED Panther PTHR10288
PolyC-binding proteins alphaCP-1 and related KH domain proteins KOG KOG2190
RNA binding PFAM PF00013
RNA-BINDING PROTEIN RELATED Panther PTHR10288
PolyC-binding proteins alphaCP-1 and related KH domain proteins KOG KOG2190
RNA-binding KH domain-containing protein AT AT5G15270

Glyma09g37076

nucleic acid binding PFAM PF00076
HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN Panther PTHR11546
Polypyrimidine tract-binding protein KOG KOG1190
polypyrimidine tract-binding protein 1 AT AT3G01150

Glyma09g37083

Glyma09g37090

Pollen allergen PFAM PF01357
endomembrane system GO GO:0012505
plant-type cell wall modification involved in multidimensional cell growth GO GO:0009831
regulation of stomatal movement GO GO:0010119
extracellular region GO GO:0005576
response to gibberellin stimulus GO GO:0009739
response to red light GO GO:0010114
syncytium formation GO GO:0006949
plant-type cell wall GO GO:0009505
plant-type cell wall loosening GO GO:0009828
unidimensional cell growth GO GO:0009826
Rare lipoprotein A (RlpA)-like double-psi beta-barrel PFAM PF03330
Pollen allergen PFAM PF01357
expansin A1 AT AT1G69530

Glyma09g37100

Thioesterase superfamily PFAM PF03061
Thioesterase superfamily protein AT AT1G48320

Glyma09g37110

Thioesterase superfamily protein AT AT1G48320

Glyma09g37120

Thioesterase superfamily PFAM PF03061
HGG motif-containing thioesterase KOG KOG3328
Thioesterase superfamily PFAM PF03061
HGG motif-containing thioesterase KOG KOG3328
Thioesterase superfamily protein AT AT1G48320

Glyma09g37130

Biotin/lipoate A/B protein ligase family PFAM PF03099
LIPOATE-PROTEIN LIGASE Panther PTHR12561
protein modification process PFAM PF03099
LIPOATE-PROTEIN LIGASE Panther PTHR12561
Biotin/lipoate A/B protein ligase family AT AT3G29010

Glyma09g37140

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Pentatricopeptide repeat (PPR) superfamily protein AT AT5G39680

Glyma09g37150

EF hand PFAM PF00036
CALMODULIN Panther PTHR10891
EF hand PFAM PF00036
CALMODULIN Panther PTHR10891
Calcium-binding EF-hand family protein AT AT5G39670

Glyma09g37160

Glyma09g37170

Dof domain, zinc finger PFAM PF02701
zinc ion binding PFAM PF02701
cycling DOF factor 2 AT AT5G39660

Glyma09g37180

60S RIBOSOMAL PROTEIN L34 Panther PTHR10759
intracellular Panther PTHR10759
Ribosomal protein L34e superfamily protein AT AT3G01170

Glyma09g37190

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Pentatricopeptide repeat (PPR-like) superfamily protein AT AT5G50390

Glyma09g37200

Domain of unknown function (DUF298) PFAM PF03556
RP42 RELATED Panther PTHR12281
Domain of unknown function (DUF298) PFAM PF03556
RP42 RELATED Panther PTHR12281
Domain of unknown function (DUF298) AT AT3G28970

Glyma09g37210

Protein of unknown function (DUF679) PFAM PF05078
Protein of unknown function (DUF679) AT AT1G09157

Glyma09g37220

POT family PFAM PF00854
OLIGOPEPTIDE TRANSPORTER-RELATED Panther PTHR11654
H+/oligopeptide symporter KOG KOG1237
Major Facilitator Superfamily PFAM PF07690
oligopeptide transport PFAM PF00854
OLIGOPEPTIDE TRANSPORTER-RELATED Panther PTHR11654
H+/oligopeptide symporter KOG KOG1237
nitrate transporter 1.5 AT AT1G32450

Glyma09g37230

POT family PFAM PF00854
OLIGOPEPTIDE TRANSPORTER-RELATED Panther PTHR11654
H+/oligopeptide symporter KOG KOG1237
Major Facilitator Superfamily PFAM PF07690
oligopeptide transport PFAM PF00854
OLIGOPEPTIDE TRANSPORTER-RELATED Panther PTHR11654
H+/oligopeptide symporter KOG KOG1237
nitrate transporter 1.5 AT AT1G32450

Glyma09g37240

PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
PPR repeat PFAM PF01535
PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Panther PTHR10483
Pentatricopeptide repeat (PPR) superfamily protein AT AT2G36730

Glyma09g37250

Peptidase family M41 PFAM PF01434
METALLOPROTEASE M41 FTSH Panther PTHR23076
PFAM PF05496
ATPase family associated with various cellular activities (AAA) PFAM PF07728
ATP binding PFAM PF00004
metalloendopeptidase activity PFAM PF01434
METALLOPROTEASE M41 FTSH Panther PTHR23076
FTSH protease 6 AT AT5G15250

Glyma09g37260

Transmembrane amino acid transporter protein PFAM PF01490
AMINO ACID TRANSPORTER Panther PTHR22950
Amino acid transporters KOG KOG1303
Transmembrane amino acid transporter protein PFAM PF01490
AMINO ACID TRANSPORTER Panther PTHR22950
Amino acid transporters KOG KOG1303
Transmembrane amino acid transporter family protein AT AT3G28960

Glyma09g37270

Transmembrane amino acid transporter protein PFAM PF01490
AMINO ACID TRANSPORTER Panther PTHR22950
Amino acid transporters KOG KOG1303
Transmembrane amino acid transporter protein PFAM PF01490
AMINO ACID TRANSPORTER Panther PTHR22950
Amino acid transporters KOG KOG1303
Transmembrane amino acid transporter family protein AT AT3G28960

Glyma09g37280

Major intrinsic protein PFAM PF00230
AQUAPORIN TRANSPORTER Panther PTHR19139
Aquaporin (major intrinsic protein family) KOG KOG0223
transport PFAM PF00230
transport Panther PTHR19139
Aquaporin (major intrinsic protein family) KOG KOG0223
NOD26-like intrinsic protein 4;2 AT AT5G37820

Glyma09g37290

Gibberellin regulated protein PFAM PF02704
Gibberellin regulated protein PFAM PF02704
GAST1 protein homolog 4 AT AT5G15230
Gibberellin-regulated family protein AT AT1G74670

Glyma09g37300

ZF-HD protein dimerisation region PFAM PF04770
Transcription factor EMX1 and related HOX domain proteins KOG KOG0843
ZF-HD protein dimerisation region PFAM PF04770
homeobox protein 34 AT AT3G28920

Glyma09g37310

ZF-HD protein dimerisation region PFAM PF04770
ZF-HD protein dimerisation region PFAM PF04770
mini zinc finger 2 AT AT3G28917

Glyma09g37320

ZF-HD protein dimerisation region PFAM PF04770
ZF-HD protein dimerisation region PFAM PF04770
mini zinc finger 2 AT AT3G28917

Glyma09g37331

ZF-HD protein dimerisation region PFAM PF04770
mini zinc finger 2 AT AT3G28917

Glyma09g37340

Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Transcription factor, Myb superfamily KOG KOG0048
myb proto-oncogene protein, plant KO K09422
Myb-like DNA-binding domain PFAM PF00249
MYB-RELATED Panther PTHR10641
Transcription factor, Myb superfamily KOG KOG0048
myb proto-oncogene protein, plant KO K09422
myb domain protein 30 AT AT3G28910

Glyma09g37350

Protein of unknown function (DUF1666) PFAM PF07891
60S RIBOSOMAL PROTEIN L34 Panther PTHR10759
Protein of unknown function (DUF1666) PFAM PF07891
intracellular Panther PTHR10759
Protein of unknown function (DUF1666) AT AT5G39785

Glyma09g37360

Ribosomal protein L34e PFAM PF01199
60S RIBOSOMAL PROTEIN L34 Panther PTHR10759
60s ribosomal protein L34 KOG KOG1790
RP-L34e, RPL34; large subunit ribosomal protein L34e [GO:0005842 ] KO K02915
intracellular PFAM PF01199
intracellular Panther PTHR10759
60s ribosomal protein L34 KOG KOG1790
large subunit ribosomal protein L34e KO K02915
Ribosomal protein L34e superfamily protein AT AT1G26880

Glyma09g37370

Helix-loop-helix DNA-binding domain PFAM PF00010
transcription regulator activity PFAM PF00010
basic helix-loop-helix (bHLH) DNA-binding family protein AT AT3G28857

Glyma09g37380

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PFAM PF00076
ALDO/KETO REDUCTASE Panther PTHR11732
nucleic acid binding PFAM PF00076
oxidoreductase activity Panther PTHR11732
RNA-binding (RRM/RBD/RNP motifs) family protein AT AT3G01210

Glyma09g37400

Glutaredoxin PFAM PF00462
GLUTAREDOXIN Panther PTHR10168
Glutaredoxin-related protein KOG KOG2824
protein disulfide oxidoreductase activity PFAM PF00462
GLUTAREDOXIN Panther PTHR10168
Glutaredoxin-related protein KOG KOG2824
Glutaredoxin family protein AT AT5G39865

Glyma09g37410

Homeobox associated leucine zipper PFAM PF02183
HOMEOBOX PROTEIN Panther PTHR19418
Transcription factor HEX, contains HOX and HALZ domains KOG KOG0483
homeobox-leucine zipper protein KO K09338
sequence-specific DNA binding PFAM PF00046
nucleus PFAM PF02183
HOMEOBOX PROTEIN Panther PTHR19418
Transcription factor HEX, contains HOX and HALZ domains KOG KOG0483
homeobox-leucine zipper protein KO K09338
homeobox 3 AT AT5G15150

Glyma09g37430

diacylglycerol O-acyltransferase activity PFAM PF03007
diacylglycerol O-acyltransferase activity PFAM PF06974
O-acyltransferase (WSD1-like) family protein AT AT3G49190

Glyma09g37450

Aldose 1-epimerase PFAM PF01263
ALDOSE-1-EPIMERASE Panther PTHR10091
Predicted mutarotase KOG KOG1604
Aldose 1-epimerase. EC 5.1.3.3
E5.1.3.3, galM; aldose 1-epimerase [EC:5.1.3.3 ] [COG:COG2017 ] [GO:0004034 ] KO K01785
Activity=maturotase; Pathway=UDP-sugars interconversion SoyCyc PWY-5114
Activity=maturotase; Pathway=galactose degradation I (Leloir pathway) SoyCyc PWY-6317
isomerase activity PFAM PF01263
hexose metabolic process Panther PTHR10091
Predicted mutarotase KOG KOG1604
aldose 1-epimerase EC 5.1.3.3
aldose 1-epimerase [EC:5.1.3.3] KO K01785
Galactose mutarotase-like superfamily protein AT AT5G15140

Glyma09g37461

oxidoreductase activity, acting on CH-OH group of donors PFAM PF10527
PQQ enzyme repeat PFAM PF01011

Glyma09g37470

WRKY DNA -binding domain PFAM PF03106
sequence-specific DNA binding PFAM PF03106
WRKY DNA-binding protein 72 AT AT5G15130

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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