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Integrating Genetics and Genomics to Advance Soybean Research

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Genes Covered By A Chromosome Alteration FN0110332.02.M3.5

Gene NameGene Annotation
Glyma12g23950
Glyma12g24150
  • Domain of unknown function (DUF3598)PFAMPF12204
  • Domain of unknown function (DUF3598)ATAT2G44760
Glyma12g24163
Glyma12g24176
Glyma12g24190
  • Fructose-bisphosphate aldolase class-IPFAMPF00274
  • FRUCTOSE-BISPHOSPHATE ALDOLASEPantherPTHR11627
  • Fructose-biphosphate aldolaseKOGKOG1557
  • response to cadmium ionGOGO:0046686
  • plastoglobuleGOGO:0010287
  • response to oxidative stressGOGO:0006979
  • mitochondrionGOGO:0005739
  • fructose-bisphosphate aldolase activityGOGO:0004332
  • chloroplastGOGO:0009507
  • pentose-phosphate shuntGOGO:0006098
  • Activity=fructose-bisphosphate aldolase; Pathway=Calvin-Benson-Bassham cycleSoyCycCALVIN-PWY
  • Activity=fructose-bisphosphate aldolase; Pathway=sucrose biosynthesisSoyCycSUCSYN-PWY
  • Activity=fructose-bisphosphate aldolase; Pathway=gluconeogenesis ISoyCycGLUCONEO-PWY
  • Activity=fructose-bisphosphate aldolase; Pathway=sucrose degradation VI (anaerobic)SoyCycPWY-3801
  • Activity=fructose-bisphosphate aldolase; Pathway=superpathway of glycolysis and Entner-DoudoroffSoyCycGLYCOLYSIS-E-D
  • Activity=fructose-bisphosphate aldolase; Pathway=superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycleSoyCycPWY-5464
  • Activity=fructose-bisphosphate aldolase; Pathway=glycolysis ISoyCycGLYCOLYSIS
  • Activity=fructose-bisphosphate aldolase; Pathway=glycolysis IV (plant cytosol)SoyCycPWY-1042
  • Activity=fructose-bisphosphate aldolase; Pathway=glycolysis II (from fructose-6P)SoyCycPWY-5484
  • Activity=fructose-bisphosphate aldolase; Pathway=oxygenic photosynthesisSoyCycPHOTOALL-PWY
  • Activity=fructose-bisphosphate aldolase; Pathway=superpathway of cytosolic glycolysis plants, pyruvate dehydrogenase and TCA cycleSoyCycPWY-5464
  • Activity=fructose-bisphosphate aldolase; Pathway=sucrose degradation to ethanol and lactate anaerobicSoyCycPWY-3801
  • Activity=fructose-bisphosphate aldolase; Pathway=Glycolysis ISoyCycGLYCOLYSIS
  • Activity=fructose-bisphosphate aldolase; Pathway=superpathway of glycolysis and Entner-DoudoroffSoyCycGLYCOLYSIS-E-D
  • Activity=fructose-bisphosphate aldolase; Pathway=GluconeogenesisSoyCycGLUCONEO-PWY
  • Activity=fructose-bisphosphate aldolase; Pathway=Glycolysis IIISoyCycANAGLYCOLYSIS-PWY
  • Activity=fructose-bisphosphate aldolase; Pathway=Glycolysis IV plant cytosolSoyCycPWY-1042
  • Activity=fructose-bisphosphate aldolase; Pathway=Calvin-Benson-Bassham cycleSoyCycCALVIN-PWY
  • glycolysisPFAMPF00274
  • glycolysisPantherPTHR11627
  • Fructose-biphosphate aldolaseKOGKOG1557
  • Aldolase superfamily proteinATAT2G01140
Glyma12g24205
Glyma12g24221
  • metal ion bindingPFAMPF00596
  • PENTULOSE-5-PHOSPHATE-4-EPIMERASE-RELATEDPantherPTHR10640
  • haloacid dehalogenase-like hydrolase family proteinATAT5G53850
Glyma12g24235
Glyma12g24250
Glyma12g24368
Glyma12g24486
  • acid-amino acid ligase activityPFAMPF00179
  • UBIQUITIN-CONJUGATING ENZYME E2PantherPTHR11621
  • Ubiquitin-protein ligaseKOGKOG0417
  • ubiquitin-conjugating enzyme 25ATAT3G15355
Glyma12g24604
  • acid-amino acid ligase activityPFAMPF00179
  • UBIQUITIN-CONJUGATING ENZYME E2PantherPTHR11621
  • Ubiquitin-protein ligaseKOGKOG0417
  • ubiquitin-conjugating enzyme 25ATAT3G15355
Glyma12g24722
Glyma12g24840
Glyma12g24860
  • Cytochrome C oxidase copper chaperone (COX17)PFAMPF05051
  • FAMILY NOT NAMEDPantherPTHR16719
  • Cytochrome c oxidase assembly protein/Cu2+ chaperone COX17KOGKOG3496
  • COX17; cytochrome c oxidase subunit XVII assembly proteinKOK02260
  • mitochondrial intermembrane spacePFAMPF05051
  • mitochondrial intermembrane spacePantherPTHR16719
  • Cytochrome c oxidase assembly protein/Cu2+ chaperone COX17KOGKOG3496
  • cytochrome c oxidase subunit XVII assembly proteinKOK02260
  • cytochrome c oxidase 17ATAT3G15352
Glyma12g24910
Glyma12g24920
Glyma12g24931
Glyma12g24941
  • gb def: Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K1G2PantherPTHR23328:SF3
  • SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-relatedATAT2G38920
Glyma12g24951
Glyma12g24961
Glyma12g24971
Glyma12g24981
Glyma12g24991
  • mitochondrial electron transport, cytochrome c to oxygenPFAMPF00510
  • mitochondrial electron transport, cytochrome c to oxygenPantherPTHR11403
  • Cytochrome oxidase subunit III and related proteinsKOGKOG4664
  • cytochrome-c oxidaseEC1.9.3.1
  • cytochrome c oxidase subunit III [EC:1.9.3.1]KOK02262
  • Cytochrome c oxidase, subunit IIIATAT2G07687
Glyma12g25000
  • Protein tyrosine kinasePFAMPF07714
  • CDC2-RELATED KINASEPantherPTHR11295
  • Cdc2-related protein kinaseKOGKOG0600
  • protein phosphorylationPFAMPF00069
  • Protein tyrosine kinasePFAMPF07714
  • CDC2-RELATED KINASEPantherPTHR11295
  • Cdc2-related protein kinaseKOGKOG0600
  • Protein kinase superfamily proteinATAT1G53050
Glyma12g25080
Glyma12g25160
  • protein phosphorylationPFAMPF00069
  • Protein tyrosine kinasePFAMPF07714
  • CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATEDPantherPTHR22982
  • CDPK-related kinaseATAT3G50530
Glyma12g25240
  • WD domain, G-beta repeatPFAMPF00400
  • WD40 REPEAT FAMILYPantherPTHR22850
  • Conserved WD40 repeat-containing proteinKOGKOG0316
  • protein phosphorylationPFAMPF00069
  • WD domain, G-beta repeatPFAMPF00400
  • WD40 REPEAT PROTEINPantherPTHR22847
  • U5 snRNP-specific protein-like factor and related proteinsKOGKOG0265
  • SPA1-related 3ATAT3G15354
  • EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE (EIF2-ALPHA KINASE)-RELATEDPantherPTHR11042






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